Neogale vison (American mink): 122901107
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Entry
122901107 CDS
T08764
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04110
Cell cycle
nvs04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122901107 (SMC3)
04114 Oocyte meiosis
122901107 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122901107 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
nvs00535
]
122901107 (SMC3)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122901107 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
122901107 (SMC3)
Proteoglycans [BR:
nvs00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
122901107 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
OmpH
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
122901107
NCBI-ProteinID:
XP_044096424
UniProt:
U6CV11
LinkDB
All DBs
Position
2:221140205..221178195
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AA seq
1217 aa
AA seq
DB search
MYIKQVIIQGFRSYRDQTIVDPFSSKHNVIVGRNGSGKSNFFYAIQFVLSDEFSHLRPEQ
RLALLHEGTGPRVISAFVEIIFDNSDNRLPIDKEEVSLRRVIGAKKDQYFLDKKMVTKND
VMNLLESAGFSRSNPYYIVKQGKINQMATAPDSQRLKLLREVAGTRVYDERKEESISLMK
ETEGKREKINELLKYIEERLHTLEEEKEELAQYQKWDKMRRALEYTIYNQELNETRAKLD
ELSAKRETSGEKSRQLRDAQQDARDKMEDIERQVRELKTKISAMKEEKEQLSAERQEQIK
QRTKLELKAKDLQDELAGNSEQRKRLLKERQKLLEKIEEKQKELAETEPKFNSVKEKEER
GIARLAQATQERTDLYAKQGRGSQFTSKEERDKWIKKELKSLDQAINDKKRQIAAIHKDL
EDTEANKEKNLEQYNKLDQDLNEVKARVEELDRKYYEVKNKKDELQSERNYLWREENAEQ
QALAAKREDLEKKQQLLRAATGKAILNGIDSINKVLDHFRRKGINQHVQNGYHGIVMNNF
ECEPAFYTCVEVTAGNRLFYHIVDSDEVSTKILMEFNKMNLPGEVTFLPLNKLDVRDTAY
PETNDAIPMISKLRYNPRFDKAFKHVFGKTLICRSMEVSTQLARAFTMDCITLEGDQVSH
RGALTGGYYDTRKSRLELQKDVRKAEEELGELEAKLNENLRRNIERINNEIDQLMNQMQQ
IETQQRKFKASRDSILSEMKMLKEKRQQSEKTFMPKQRSLQSLEASLHAMESTRESLKAE
LGTDLLSQLSLEDQKRVDALNDEIRQLQQENRQLLNERIKLEGIITRVETYLNENLRKRL
DQVEQELNELRETEGGTVLTATTSELEAINKRVKDTMARSEDLDNSIDKTEAGIKELQKS
MERWKNMEKEHMDAINHDTKELEKMTNRQGMLLKKKEECMKKIRELGSLPQEAFEKYQTL
SLKQLFRKLEQCNTELKKYSHVNKKALDQFVNFSEQKEKLIKRQEELDRGYKSIMELMNV
LELRKYEAIQLTFKQVSKNFSEVFQKLVPGGKATLVMKKGDVEGSQSQDEGEGSGESERG
SGSQSSVPSVDQFTGVGIRVSFTGKQGEMREMQQLSGGQKSLVALALIFAIQKCDPAPFY
LFDEIDQALDAQHRKAVSDMIMELAVHAQFITTTFRPELLESADKFYGVKFRNKVSHIDV
ITAEMAKDFVEDDTTHG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtacataaaacaggttattatccagggctttcggagttacagagatcaaacaattgta
gatcccttcagttcaaaacataacgttatcgtgggcagaaatggatctggaaaaagtaac
tttttttatgcaattcagtttgttcttagtgatgagttcagtcatcttcgtcccgagcag
cgattggctttgttgcatgagggtactggtcctcgtgtcatttctgcttttgtggagatt
atttttgataattcagacaaccggttgccaattgataaggaagaagtttcacttagaaga
gttattggtgccaaaaaggatcagtatttcctagacaagaaaatggtcacgaaaaatgat
gtgatgaatctccttgaaagtgctggtttttctcgaagcaatccttattacattgtaaaa
caaggaaagatcaaccagatggccacagcaccagattctcagagactaaaactattaaga
gaagtagctggtactagagtatatgatgaacgaaaagaagaaagcatatctttaatgaaa
gaaacagagggcaaacgggaaaaaatcaatgagttgttaaaatatattgaagagagatta
cataccttagaagaagaaaaggaagaactagctcagtatcaaaagtgggataaaatgaga
cgagccctggaatataccatttataaccaggagcttaacgagactcgtgctaaacttgat
gagctttctgctaagcgagagactagtggagaaaaatccaggcaattaagagatgcccag
caggatgcaagagataagatggaggatattgagcgccaagttagagaactgaaaacaaaa
atttcagctatgaaagaagaaaaggagcagctcagtgctgaaagacaagagcagattaag
cagaggactaaattggagcttaaagccaaggatttacaagatgaattggcaggcaatagt
gaacaaaggaaacgcttattaaaagagaggcagaagctgctcgaaaaaatagaagaaaaa
cagaaagaactggcagaaacagaacctaaattcaacagtgtgaaagaaaaagaagagcga
ggaattgctagattggcccaagctacccaggaaagaacagatctttatgcaaagcagggt
cgaggaagccagtttacatcaaaagaagaaagggataagtggattaaaaaggaactcaag
tctttagatcaggctattaatgacaaaaaaagacagattgctgctatccataaggatttg
gaggacacggaggcaaataaagagaaaaacctggagcagtataataaactggatcaggat
cttaacgaagtcaaagctcgagtagaagaactggacagaaaatactacgaagtaaaaaat
aagaaagatgaattacaaagtgaaagaaattacttgtggagagaggagaatgcagaacag
caagcacttgctgctaaaagagaagatcttgaaaagaaacagcaacttcttagagcagca
acaggaaaggctattttaaatggaatagacagcataaacaaagtactggaccactttcgt
aggaaaggaataaaccagcatgttcagaatggttatcacggcatcgtgatgaataacttc
gaatgtgagcctgctttctacacatgcgtggaagtcactgctggcaacaggttattttat
catattgttgattcagatgaagtcagcacaaagattttgatggagtttaataaaatgaat
cttcctggagaggtcacttttcttcctcttaacaagttagatgtcagggatactgcctat
cctgaaaccaatgatgcaattcctatgataagtaaattgaggtacaatcccagatttgac
aaagctttcaaacatgtgtttgggaaaacacttatttgccgtagcatggaagtttcaacc
cagctagctcgtgctttcactatggactgcattaccctagaaggtgaccaagtaagtcat
cggggtgctctaactggaggttactatgacacaaggaagtctagacttgaattgcagaaa
gatgttagaaaagcagaagaagaactaggtgagcttgaagcaaagctcaatgaaaacctg
cgcagaaatattgaaaggattaataatgaaattgatcagttgatgaaccaaatgcagcag
atagagacccagcaaaggaaatttaaagcatctcgagatagcatattatcagaaatgaag
atgctaaaagagaagaggcagcagtcagagaagacttttatgccaaagcaacgtagctta
caaagtttagaagcaagcttgcatgctatggagtctaccagagaatcgttgaaagcagaa
ctgggaactgatttgctttcacaacttagtctggaagatcagaagagagtagatgcactg
aatgatgaaattcgtcaacttcagcaggaaaacagacagttgctaaatgaaagaattaaa
ttagaaggtatcattactcgagtagagacctacctaaatgagaatttgaggaaacgcttg
gaccaagtagaacaggaacttaatgagctgagagagacggaagggggtactgttctcact
gctacaacctcagaactcgaagcgatcaataaaagagtaaaagatactatggcacgatca
gaagatttggacaattccattgataaaacagaagctggaattaaggaacttcagaagagt
atggaacgctggaaaaatatggaaaaagaacacatggatgctataaatcatgatactaaa
gaactagaaaagatgacgaatcgacaaggcatgctactaaagaagaaagaggagtgtatg
aagaaaatccgagagcttggttcacttccccaggaagcatttgaaaagtaccaaacactg
agtctcaaacagttgtttcgaaaacttgaacagtgcaacacagaattgaagaagtacagc
catgttaacaaaaaagctttagatcagtttgtgaatttctctgagcagaaagaaaagtta
ataaaacgacaagaagagttagatagggggtacaaatcaatcatggaactgatgaacgta
cttgaacttcgaaaatacgaagctattcagttaactttcaagcaggtatcgaagaatttc
agtgaagtattccagaagttggtacctggtggcaaagctactttggtaatgaagaaagga
gatgtggagggcagtcagtctcaggatgaaggagaaggaagtggtgaaagtgagaggggt
tctgggtcacagagcagcgtcccatcagttgaccagttcactggagttggaattagggtg
tcatttacaggaaaacagggtgaaatgagagaaatgcaacagctttctggtggacagaaa
tccttggtagctcttgctctgatttttgctattcagaaatgtgacccagctcctttttac
ctgtttgatgagattgaccaggctctggatgcccagcacagaaaagctgtgtcagatatg
attatggaacttgctgtacatgcgcaatttattacaactacttttaggcctgaactgctt
gagtcagctgacaaattctatggtgtaaaatttagaaataaggttagtcatattgacgtg
atcacagcagagatggccaaagactttgtagaagatgatactactcatggttaa
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