Neogale vison (American mink): 122901239
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Entry
122901239 CDS
T08764
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122901239 (DDX4)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122901239 (DDX4)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122901239 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
122901239
NCBI-ProteinID:
XP_044096715
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All DBs
Position
1:complement(231157778..231231368)
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AA seq
727 aa
AA seq
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MGDEDWEAEIIKPHMSSYVPVFEKDRYSSGANGDTFNRTPASSSEMDDGPSRRDHFMRSG
FASGRSMGNRDAGESNKKENTSTMGGFGVGKSFGNRGFSNNKFEEGDSSDFWRESNNDCE
DNQTRSRGFSKRGGYQDGNDSEASGSSRRGGRGSFRGCRGGFGLGSPNSEYEQDEGTQRT
GGLFGSRRPALSGAGNGDTYQSRSGSGSGRGGYKGLNEEVVTGSGKNSWKSEAEGGESGD
TQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILNFEEANLCQT
LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDGITAS
RFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNI
LCATPGRLMDIIGKEKIGLRQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEERQTL
MFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLVEILRNI
GDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATS
VAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGQAISFFDPDSDNHLAQPLVK
VLSDAQQDVPAWLEEIAFSTYVPGFSGSSARGNVFASVDTRKGKSTLNTAGFSSSQAPNP
VDDESWD
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaagcagaaataatcaaacctcatatgtcttcctatgttcct
gttttcgagaaggataggtattcttctggagcaaatggagacacttttaacaggactcca
gcttcatcatcagaaatggatgatggaccttctcgaagagatcatttcatgagaagcgga
tttgcctctgggaggagtatgggaaacagagatgctggcgaatctaataaaaaagagaat
acatccacaatgggtggttttggagttggaaagagttttggaaacagaggtttttcaaat
aacaagtttgaagaaggtgatagctctgatttctggagagaatctaataatgactgtgaa
gataatcaaacacggagcagagggttttccaagagaggcggctatcaagatggaaatgat
tcagaagcttcagggtcatccagaagaggtggaagaggtagtttccgaggttgccgtgga
ggatttggtctaggaagtccaaatagtgaatatgaacaagatgaaggaacacagcgcact
ggtggcctttttggttctagaagaccagcattaagtggcgcaggtaatggtgacacttac
caaagcagaagtggcagtggaagtggacgaggtggttacaaaggtttaaatgaagaagta
gtaacaggctctggaaaaaattcttggaagtcagaagctgaaggaggagaaagtggtgat
actcaaggaccaaaggtgacctacataccacctcctccacctgaggatgaggactccatc
tttgcacattatcagacaggcataaactttgacaaatatgatactattcttgtagaagta
tctggacatgatgcaccaccagcaattctgaattttgaggaagctaatctctgtcagaca
ctgaataacaacattgctaaagctggttatactaaacttactcctgtgcaaaaatacagt
attcctattatattagcaggacgagatttgatggcttgtgctcagacagggtctggaaag
actgcagcttttctcttgccaattttggcacatatgatgcgtgatggaataacagccagt
cgttttaaagagctgcaggaaccagagtgcatcattgtagcaccaactcgagaactgatc
aatcagatctatctggaagccagaaagttttcttttgggacctgtgtaagagctgttgtt
atatatgggggaacccagttggggcattcaattcgacaaatagtacaaggttgtaatata
ttatgtgctactcctgggagactgatggatatcataggtaaagaaaagattggtctcaga
caagtcaaatatttagttctggatgaagctgatcgcatgctggatatgggttttggacca
gaaatgaagaagttaatttcttgccctggaatgccatcaaaagaagagcggcaaaccctt
atgtttagtgcaacttttccggaagaaattcaaaggttggctggggagtttttaaagtcg
aattatttgtttgttgctgttggacaagtgggtggagcatgtagagatgttcagcagacc
attctccaagttggccagtactccaaaagagaaaaacttgttgaaattctacgaaacata
ggtgatgaaagaactatggtttttgttgagactaagaaaaaagcagattttattgctact
tttctttgtcaagaaaaaatatcaacaacaagtattcatggtgaccgagaacagagagag
agagagcaagctcttggagattttcgctgtggaaagtgtccagttcttgttgctacttca
gtagctgccagggggctggatattgaaaatgttcaacatgttatcaattttgatcttcct
tctaccattgatgaatatgtacaccgaattggacgtactggtcgttgtggaaatactggc
caagctatttccttttttgatcctgattcagataaccatttggcacagcctttagtgaaa
gtactgtcagatgcccaacaggatgttcctgcatggttggaagaaattgcctttagtacg
tatgttcctggcttcagtggtagtagcgcaagaggaaatgtgtttgcatcagttgacact
agaaagggcaagagcactttgaacacagcagggttttcttcttcacaagctcccaaccca
gtagacgatgagtcatgggattaa
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