Neogale vison (American mink): 122901996
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Entry
122901996 CDS
T08764
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122901996 (SOX30)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122901996 (SOX30)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
122901996
NCBI-ProteinID:
XP_044096979
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Position
1:268632450..268668057
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AA seq
768 aa
AA seq
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MERARPEPQPQPRQLPRATPPRPLRPAPPQLPVEGASFRAAAAELPPSPPTPCAAAIATV
ASSCGEAQASGVQPAARRLLQVKPEQVLLLPPGPPLAQARDEGVVASPAQARLLQLRPEL
LLLPPPPPASDGAPCRPELHPVQSRALHVKAEKQEQGPDLDPSAGTRRPVEAGSRASRTA
KVEGPGPALDGHGGDEKKGKLEAEEVMRDVVKGGEGKTLATIREGVIKTEEPERLREDCR
LGTEPASNGLVHGNKEVILAQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGDA
PPAIQLPTPAVQRPSPISLFQPSVSSTAQVGIQAPSLPLRPALPPQRFAGPSQTDTHRLH
SGASRSVKRPTPVSLENTNRIPTSASTAHARFATSTIQPPKEYPSVSTCPRSAPIPQAPP
IPHSHVYQAPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESMDGTSYYNSHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgcaacctcagccgcgccaactgccgagggcgaccccg
ccgcgcccgctccgccctgctcccccacagctgccggtcgagggcgcctcctttagggct
gcggccgcggagctccccccgtcgccgcccaccccgtgcgcggccgccattgcgaccgtg
gcctcgtcgtgcggggaggctcaggcgtcgggtgtacagcccgcggcgcggcggctgctg
caggtgaagccggagcaggtgttgctgctgccgccagggccaccgctggctcaggcccgg
gacgaaggcgtcgtcgcctcaccggcgcaagcacggctgctgcagctgaggcccgagctg
ctgctgctgccaccgcctccgcccgcgtccgacggcgccccctgccgaccggagctgcac
ccggtgcagtcccgagcgctacacgtcaaggctgagaagcaggagcaggggcccgacttg
gatccatcggcggggacgcgaaggcctgtggaggcaggctctagagcctccaggacggcc
aaggtagaaggcccggggccagctctcgacggccacggaggggacgagaaaaagggcaag
ctggaggcggaggaggtcatgagggacgtggtgaaaggcggggagggcaaaaccctggcg
accatcagagaaggagtcatcaaaacagaggagcccgagagactccgcgaggactgcagg
ctgggcacggagcccgcgtccaatggcctggtccacggcaacaaagaagtcatcctggcc
cagccatccagtgcctttgggccacaccagcaagacctcaggatccctttgactctccac
acggtcccccctggggcccggatccaatttcagggacctccgccttcagagctgatacgg
ttgaccaaggtccccttgacaccagtgcctattaaaatgcaatccttactggagccttct
gtaaaaattgaaaccaaagatgtcccgctcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcttttatg
gtttgggcaaggattcaccgaccagcactagctaaagctaacccagcagccaacaatgca
gaaatcagtgtccagctcgggttagagtggaacaaacttagtgaagaacaaaagaaacct
tattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtt
tatcaacctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgtattttct
ggtaccacacagaatatcatctctacaaatcctacaacaatatatccttatcgctcacct
acctactctgtggtaattcccagcctacagaacaccatcactcatccagttggtgacgcc
ccacctgccatccaactgcccacacctgcggtccagcgcccaagccccatctcacttttc
cagcccagcgtctccagtactgcccaggtgggcatccaggctccaagcctgcccctccgt
ccagcactcccaccccagcgctttgcggggccctcccaaacagacactcatcggctgcac
tccggagccagtcgctccgtgaagagacctactcccgtctctctggagaacaccaacagg
attccaactagtgcaagtactgcccatgccagatttgcaacctcaaccatccaacctccc
aaggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtctaccaagctcctccccttggccatccagccacgttgtttggg
acaccaccacgattttcttttcatcacccttacttcctacctggacctcactacttccca
tcaagcacctgcccttatagtcggcctccctttggctatggaaattttccaagctcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacacgaggctatgttttcagct
ttaaatagagactatccttttagagactatccagatgaacgcacacacagtgaagattct
cggagttgtgagagcatggatgggacctcttactataacagtcatagccacagtggggaa
gaatatttaaatcccatgcctcagctggacattggagccttggagaatgtcttcacagcc
ccaacatcaactccctctagcatccagcaagtcaatgtcactgacagtgatgaggaggaa
gaagaaaaagtgctcagaaatttataa
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