Neogale vison (American mink): 122902288
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Entry
122902288 CDS
T08764
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122902288 (SMARCAL1)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122902288 (SMARCAL1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
W02B3_4_N
Motif
Other DBs
NCBI-GeneID:
122902288
NCBI-ProteinID:
XP_044097505
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All DBs
Position
3:27040882..27101301
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AA seq
959 aa
AA seq
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MSMPLTEEQRKKIEENRQKALARRAEKLLAEKHQSADSGSSIATSSPQSKQGPLSNFPRD
PSKPANHGVIFRQQNLSGSSNGDQRPPNSHSFHLSTPEQAKGIWKRQDVPTACLSHSPSG
QMTHTGISSPSAQSPPEGPSQQMLGGPLGKGHPPASQEIKSTPVANTTQEPLSKAKSFQK
TVASFFGQPPRDPGVEAKAVRPSTLGQNISDTNCGSGSVTPGTEGRHPQKLGASHHKAGS
SQEGRCIRSGDRFQVKIGYNAELITVFKRLPSRSYDPATKTWNFSMTDYGALMKAAQSLP
TVTLQPLEGAEDNRESPSTSGVAQTCLPLAPSLAFVKGQCVLISRVRFEADIGYSEDLIA
LFKQMESRNYDVKTRKWNFLLEEHNKLIQSVRCLPQVQLDPLPKTLTLAFASQLEKTSPC
LTEPIPEADLSGVDPKLVSNLLPFQRAGVNFAIAKRGRLLLADDMGLGKTIQAICIAAFY
RKEWPLLVVVPSSVRFTWEQAFLQWLPSLSPDCINVVVTGKDRLTAGLVNIVSFDLLSKL
EKQLKTPFKVVIIDESHFLKNIKTARCRAALPLLKVAKRVILLSGTPAVSRPAELYTQII
GVRPTFFPQFHAFGLRYCDAKRHPWGWDYSGSSNLGELKLLLEEAVMLRRLKSDVLAQLP
PKQRKMVVVAPGRISTKARAALDAAAKEMTTTDKTKRQQKEALLLFFNRTAEAKIPSVIE
YILDLLESGREKFLVFAHHKVVLSAITTELERKHVPHIRIDGSTSSADREDLCQQFQLFE
KHAVAVLSITAANMGLTFTSADLVVFAELFWNPGVLLQAEDRVHRIGQSSSVSIHYLVAR
GTADDYLWPLIQEKIKVLGEAGLSETNFSETTEATNYFYKDPQQQTIYDLFQQSFEEDGS
DLELLEAAESFDPGSASGAPGSDSQDPGGTLDEITSTGSPVKKRRFEFFDNFDSFTFPL
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgcctcttacagaggagcagaggaaaaaaattgaagagaaccggcaaaaggct
ctggcccggagagctgagaaactattagcagaaaagcatcagagcgcagactctggctcc
tccattgccactagctctccccagtccaagcagggccctctctcaaacttccccagggat
ccttctaagccagcgaaccatggtgtcattttcaggcaacagaatctcagcggttcatct
aatggtgaccaaagacctcctaattcccatagttttcatctaagcactccagagcaggca
aaggggatctggaagaggcaggatgtgcccacagcctgcctgagccacagcccatcaggt
caaatgactcacactggcatctcttctccctctgcacaaagtcctccagagggccccagc
caacaaatgttgggtggtccattaggtaaaggtcatcctccggcttcacaggagatcaaa
tccacacccgttgctaacacaactcaggagcctttgtccaaagccaagagtttccagaag
acagtagcttctttctttggacagccacccagggatcctggagtagaggccaaggcagtg
aggccctccaccttggggcagaacatttctgacaccaactgtggttcagggagtgtgaca
cctgggacagaaggaaggcacccacagaaattgggggcctcacaccacaaagcaggaagc
tcccaggagggaaggtgcataagaagcggcgatcgtttccaggtgaagatcgggtacaat
gccgagctcatcacagtttttaagcgtctccccagcagaagttacgatcctgccaccaag
acgtggaacttcagcatgaccgactatggtgccctaatgaaagcagcccagagcctcccc
acggtcaccctgcagcctttggaaggggccgaggacaacagggagtcaccctccacttct
ggggtagcccagacctgcctgcctttagctccctcgctggcctttgtcaaagggcaatgc
gtgctcatctcccgggtccgcttcgaggcagacatcggctactccgaagatttgatcgca
ctgtttaagcagatggagtccagaaattacgatgtcaagaccaggaagtggaactttctc
ttggaagagcacaacaaactaatccagagtgtgcgctgccttccgcaagttcagctggac
cctctgcccaagacgctcaccctggcattcgcatcgcagctagagaagacgtctccctgc
ctcacagaacccatccctgaggcagacctttctggagtggaccccaagcttgtgtccaat
ctgctgcccttccagagagcgggagtcaattttgccatagcgaagagaggccgcctgctg
ctggctgatgacatgggcctggggaagaccatccaagccatctgtatcgcagccttttac
cggaaggagtggccgctcctggtggtggtcccgtcatctgtgcgcttcacctgggagcag
gctttccttcagtggctgccgtctctgagcccggactgcatcaacgtcgtggtgactggc
aaggatcgcctgacggctggcttggttaacattgtcagtttcgaccttctgagcaagtta
gaaaaacagctaaaaaccccctttaaagttgtcatcattgatgagtctcacttcctcaag
aacattaagaccgcccgctgtcgtgcagctctgcccctcctcaaggttgcgaagagggtg
attctgctgtctggcacaccagctgtgtcccggcccgcagagctctacacccagatcatc
ggggtcaggccaactttcttccctcagtttcatgcttttggacttcgctactgtgatgcc
aagcggcatccctggggatgggattactcaggctcctccaacctcggcgagctgaagctc
ttgctggaggaggcagtcatgctacgacgcctcaagagtgatgtccttgcccagctcccg
cccaagcagcgcaagatggtagtcgttgcccccggtcggatcagcaccaaggccagggct
gccttggatgccgcagccaaggagatgaccaccacagacaaaactaaacggcagcagaaa
gaagccctccttctcttcttcaacagaacagctgaagctaaaatcccatctgtcattgaa
tatatcctggacctcctggaaagtgggagagagaagtttctagtgttcgcacaccacaaa
gtagtcctgagtgcaattacaacagagcttgagagaaagcacgtgccgcacatccgcatc
gacggctcgacttcgtccgctgaccgcgaggacctgtgccagcagttccagctgttcgag
aagcacgccgtggccgtgctgtccatcaccgcagccaacatgggcctcaccttcacctca
gctgacctggtggtgttcgcggagctgttctggaatccaggggtactgctccaggcagag
gaccgggtacaccgaatcggacagtcgagctccgtgagcatccactacctcgtggcaaga
ggcacagctgacgactacctctggcccctaattcaagagaagattaaagttctgggtgag
gccggactttctgagaccaatttttcagaaacgacagaagctactaattacttctacaag
gacccacagcagcagacaatctatgacctcttccagcagtcctttgaggaagatggaagt
gacttggagctcctggaggcggcggaatcctttgaccccggaagtgcgtctggtgcacct
ggaagtgattctcaggacccgggaggcacactggatgaaatcacatcgacgggcagcccc
gtgaagaaaaggagatttgaattttttgataactttgatagctttacctttcccctatag
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