Neogale vison (American mink): 122902474
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Entry
122902474 CDS
T08764
Symbol
SNED1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nvs04990
]
122902474 (SNED1)
Domain-containing proteins not elsewhere classified [BR:
nvs04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
122902474 (SNED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
cEGF
Ig_DSCAM-DSCAML_C
EGF_Teneurin
NDNF
MAGP
EGF_3
Motif
Other DBs
NCBI-GeneID:
122902474
NCBI-ProteinID:
XP_044097941
LinkDB
All DBs
Position
3:47031714..47113301
Genome browser
AA seq
1380 aa
AA seq
DB search
MQRGAAWALLLAAALGLGVRGVRGAVALADFYPFGAERGDAVTPKQDDGGSGLQPLSVPF
PFFGAEHSGLYVNNNGIISFLKEVSQFTPVAFPIAKDRCVVAAFWADVDNRRAGDVYYRE
ATDPATLRRATEDVRRYFPELLDFSATWVFIATWYRVTFFGGSSSSPVNTFQTVLITDGK
FSFTIFNYESITWTTGTHASSGGDTTGLGGIAAQAGFNAGDGRRYFSIPGSRTADMAEVE
TTTNVGVPGRWAFRIDDAQVRVGGCSHTTSVCLALRPCLNGGKCIDDCVTGNPSYTCSCL
SGFTGRRCHLDVNECASHPCQNGGTCTHGVNSFSCQCPASFGGPTCETPLSPCDTRECKN
GGRCQAEEGSAVCLCLPGYTGVACETDVDECASSPCLNGGSCVNLVGNFTCLCAEPFEGP
RCETGNHPVPDPCFSAPCQNGGTCVDADEGYVCECPQGFTGPDCRERTPDHCECRNGGRC
LGANTTLCQCPPGFFGLLCEFEVTATPCNMNTQCPDGGYCMEYGGSYLCVCHTDHNVSHS
LPSPCDSDPCFNGGSCDAHEDSYTCECPRGFHGRHCEKARPRLCSSGPCRNGGTCREAGS
EYHCSCPYRFTGRHCEIGKPDSCASGPCHNGGTCFHYIGKYKCDCPPGFSGRHCEIAPSP
CFRSPCMNGGTCEDLGTDFSCRCRAGYMGRRCQAEVDCGTPAEVKHATLRFNGTRLGSVA
LYECDQGYSLSSPNYVRVCQPQGVWSEPPQCHETDECQAQPCRNGGSCRDLPGAFVCQCP
AGFTGVHCETEVDGCHSSPCQHGGRCENGGGAYLCVCPEGFFGYHCETVSDPCFSSPCGG
RGYCLASNGSHSCTCKVGYTGKDCAKELFPPTALKVEQVEESGVSISWRPPEGRAARQML
DGYAVTYTSSDGAYRRTDFVDRSRSSHQLHALAAGRAYNISVFSVKRNANNKNDISRPVL
LLTRTRPRPVEGLEVTNVTASTISVRWALHRIRHATVSGVRVSIQHPEAQEDQSTDMDKS
VDRFTFGSLLPGRRYTIQVTALSGLGGQEPPTESLASTPLHVWTRPLPPANLTAARVTAT
SAHVVWDIPTSSTLLEAYVINVTTSQSTKSRYVPNGRLTSYTVRDLLPGRRYQLSVTAVQ
SAEGDQLHSEPAHLYIITSSRDGADRRWHREGLHPRVLRNRPPPARLPELRLLSDRDAPE
TQTPAPRFSELVDGRGRVSAKFGGSPGKSVTVRSQPTAPVQLENMEEDQKQVPEQVSLAL
QLPEHRIDKDGENTPGNCSENPCQNGGTCVPGMDTHSCDCNPGFKGRRCELACKKVPQPC
TRLFSETKAVPVWEGGACHHMYKRVYKVHQDICFKESCESTSVKKTPNRKHSNSPTMKKS
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcggcgccgcctgggcgctgctcttggccgcggccctggggctaggggtgcgc
ggggttcgcggtgcggtggccctcgccgacttctaccctttcggcgcggagcgcggcgac
gctgtcacccccaagcaggacgacggaggctcgggtctgcagccgctctccgtgcccttc
ccgttcttcggcgccgaacactccggactctacgtgaacaataatgggatcatctccttc
ctgaaggaggtctctcagttcaccccagtggcatttcccatcgccaaggaccgctgcgta
gtggcagccttctgggcagatgtggacaatcgacgtgcaggtgatgtgtactaccgggag
gccactgacccagccacactgcgcagagccacagaggatgtcaggcgatacttccctgag
ctcctggacttctccgccacctgggttttcatagccacctggtaccgtgtgaccttcttc
ggaggcagctcctcttcccctgtcaacacgttccagactgtgcttatcactgacggcaag
ttctccttcaccatcttcaactacgagtccatcacgtggaccacaggcacacacgccagc
agcgggggcgacactacaggcctggggggcatcgcagcccaggccggcttcaatgcaggt
gatgggcggcgctacttcagcatccccggctcccgcacagcggacatggcggaggtggag
accaccaccaacgtgggcgtgcccgggcgctgggcgttcagaatcgatgatgcccaggtg
cgcgtggggggctgcagccatacaacctccgtgtgcctggccctgcgcccgtgccttaac
ggtggcaagtgcatcgacgactgtgtcacgggcaacccctcctacacctgctcctgcctc
tcaggcttcacggggaggcggtgtcacctggatgtgaatgaatgtgcttcccatccgtgt
caaaatggcgggacctgcacacatggtgtcaacagcttcagctgccagtgcccggccagc
ttcgggggacccacctgtgagacaccactgtctccatgtgataccagagaatgtaagaac
ggtggccggtgccaggcggaggagggctcagcggtgtgcctatgcctgcctggctacacg
ggtgtggcctgtgagacggatgtggatgagtgtgcctccagcccgtgcctcaacgggggc
tcgtgtgtcaacctcgtggggaacttcacctgcctgtgtgcagagcccttcgagggacct
cgctgtgagacaggaaaccacccagtgccggatccctgcttctcggccccttgccagaat
gggggcacctgtgtggatgcagatgagggctatgtgtgcgaatgcccccagggcttcacc
ggccccgactgcagggagagaacccctgaccactgtgagtgccgtaatggtggcagatgc
ctaggggccaacaccaccctctgccagtgccccccaggcttctttgggctcctctgtgaa
tttgaagtcacagccactccctgcaacatgaacacacagtgtcccgacgggggctactgc
atggagtacggtgggagctacctctgcgtctgccacacggaccacaacgtcagccactca
ctgccatcaccctgcgactcagacccctgcttcaacggaggttcctgtgatgcccacgag
gactcctacacttgcgagtgcccccgagggttccatggcaggcactgtgagaaagcccga
ccacgcctgtgcagctcggggccctgccggaacgggggcacgtgcagggaggcaggcagc
gagtaccactgcagctgtccctaccgcttcaccgggaggcactgcgagatcgggaagccg
gactcctgtgcctcaggcccctgtcacaatggtggcacctgcttccactacattggcaaa
tacaagtgtgactgtcccccaggcttctctgggcggcactgtgagatagccccctccccc
tgcttccggagcccctgcatgaatgggggtacctgtgaggacctgggcacagatttctcc
tgccgctgtcgagcagggtacatgggacgccgatgtcaggcggaggtggattgcggcacc
ccagcagaggtgaaacatgccacgctgcgcttcaatggcactcggctgggatccgtggcc
ctgtacgagtgtgaccaaggctacagcctgagctcccccaactacgtccgagtctgccag
ccacagggagtctggagcgaacctccacagtgccacgagacagatgagtgccaagcacaa
ccctgcagaaatggaggctcctgcagggacctcccaggggcctttgtctgccagtgccct
gcaggcttcactggagtccactgcgagacagaggtggatggctgccactccagcccctgc
cagcacggaggccggtgtgagaacggtggcggggcctacctgtgcgtctgcccagaaggc
ttcttcggctaccactgtgagacagtgagtgacccctgcttctccagcccttgtgggggc
cgcggctactgcttggccagcaatgggtcccacagctgcacctgcaaagtgggctacacg
ggcaaggattgtgccaaagagctcttcccaccaacggccctcaaggtggagcaagtggaa
gagagtggggtctccatctcctggcgtccacctgaaggtcgggccgccagacagatgctc
gatggctacgcagttacctacacatcctcagatggtgcctaccgccgcacagactttgtg
gaccggagccgctcctcgcaccagctgcacgcccttgcagccggcagagcctacaacatc
tctgtgttctcggtcaagcgcaatgccaacaacaagaatgacatcagcaggccagtgctg
ctgctgacccgcacacgaccccgcccagttgagggcctcgaggtcaccaatgtgacagcc
agcaccatctcagtgcggtgggctctgcacaggatccgtcatgccactgtcagtggcgtc
cgtgtgtccatccagcatcctgaggcccaggaggaccaatccactgatatggacaagagt
gtggacaggttcacatttgggtccctgctgccaggaaggagatacaccatccaggtgact
gccctcagtgggcttgggggacaggagcctcccactgagagcctggcctcgaccccactg
cacgtgtggactcggcccctgccaccagccaacctgacagctgccagagtcacagccacc
tctgcccatgtggtctgggacatccccacttccagtaccttgctggaggcgtatgtcatc
aacgtgaccaccagccagagcaccaagagccgctacgtccccaatgggaggctgacgtcc
tacacggtgcgggacctgctgccaggacgacgctaccagctatcagtgaccgctgtgcag
agcgctgagggtgaccaactgcacagtgagcctgctcacctctacatcatcacctcctcg
agggacggcgctgacagacgctggcacagggagggactgcatccccgagtgctcagaaac
agacccccgcccgcacgcctgccagagctgcgcctgctcagtgaccgcgacgcgcctgaa
acccagaccccggcccccaggttctcagagctggtggacggcagagggcgagtgagtgcc
aagtttgggggctcgcctggcaaatcggtcaccgtgagatcgcaacccacggctccggtg
cagcttgaaaacatggaggaagaccaaaagcaggtgcctgaacaggtcagcctggccctc
cagcttcctgaacaccgcattgacaaggatggggaaaacacccctgggaactgttcagaa
aatccctgtcagaatggaggcacctgcgtgccaggtatggacacccacagctgtgactgc
aacccagggttcaaaggcagacgctgtgagcttgcctgtaaaaaggtgcctcagccctgc
actcggctcttctcagagacaaaggccgtgccagtctgggaaggaggcgcctgtcaccac
atgtacaaaagagtctacaaagtgcatcaggacatctgcttcaaagagagctgtgaaagc
acaagcgtcaagaaaaccccaaacaggaaacacagtaacagtccaacaatgaagaaatct
tag
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