Neogale vison (American mink): 122902494
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Entry
122902494 CDS
T08764
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
KO
K11138
telomere-associated protein RIF1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
122902494 (RIF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvs03032
]
122902494 (RIF1)
DNA replication proteins [BR:
nvs03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122902494 (RIF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rif1_N
Motif
Other DBs
NCBI-GeneID:
122902494
NCBI-ProteinID:
XP_044097992
LinkDB
All DBs
Position
3:49942175..50001831
Genome browser
AA seq
2477 aa
AA seq
DB search
MTAPAESPLAPLLETLEDPSAPHGEQTDAYLTLTSRMTGEDGKEVIMEIEKKLPQLFRVL
KMHISSQNSDLCSAALQALGFCLYNPKITSGLSETDTQELLLKLNDSVKSPDKNVRTRAL
WVISKQTFPAEVIGKVVSSIIDSLEIVFNKGEMHSAVVDYEALNVIIRLIEQAPVQMGEE
SVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLLSELQKL
FMSKNETYVLKLWPLFVRLLGKTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPEILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGTSSRVAASPGLNPITPIHKGASPYGTPVTPRMNLSSNFGGM
ATIPSIQLLGLEMLLHFLLGPEVLSFAKQNKLVLSLEPLEHALISSSSFFSKHANTLITA
VHDSFVAVGKDASDAVVNAIWKELISLMKSVIESGNKKERPGSEVLTLLLKSLESIVKSE
VFPASKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNNLLESGIED
ERFFLNLETLVGCVLSGPTSPLAFSDSVLNVINQNAKLLQNKEHLWRMWSIIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPINHIFSVQKFPVATMKTLLKTWSELYRAFARCAA
LVATAEENLCCEELSSKIMSCLEDSGFSNLLFLDRIIHIVTVMIDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKKEPLGKLASLFKLIVRVIYSFHTLSFKEVHSDTLLTVGNSIISILSN
VLGRISLPSMIRKIFATLTRPLALFYENLKLDEVPKVYSCMSNKLEKLLGEIIACLHFSY
TGTYDSELLDQISPLLCIIFLHKNKQIRKQSAQFWNATFAKVTTLTYPEELKPVLRQAKQ
KFLLLLPGLENVDITEESSGPYSDSTENSQLNMKISGMERKSSGKRDSFLAQTKDAKENK
KPPVKLKLEPSSTKTKSEMPLEEEKSTDFVFIPPEGKEAKERILTEHQKEVLKTKRYDIP
VMYNNLDVSQDTLFSQYTQEESMEIPPLTEKSTEDTKVIYKEEQTERDIVIPQDVTENRD
MDEHLEKASLSDNERGSNDEASPEVPSSNNDSRKNALISSKKTTECSSSAENTSGVNISS
VSNAIISGILPQPTSRRQTFITLEKFDGSENRPFSPSALNNMSSTVTVKNNQEVMGKIDN
PPKAKKREMAIAKPDAEKIAHGIKRSSRRSSKAEQTGNKRSKLLMRSDQEKNTQESIDGT
VVLENNPPGLLNPTECVLDNQAHLSESTMEDEDTMLKPTIENLVLLENSTVEEKTLGISL
ESKENTPPAIIPADQMVDEDSPVQITPNQKTLRRSSRRRSEIAEPTPESQEKENNHQKKD
RRKEEEKTLQKSPLHVKDDVLPKQKLIAEQTLQENLIDKGNNLHEKTFGETSTTSEIDES
KKKLDLENIKSEGDSAQDIVDKSSEKPVSGRTRYQTRRASQGLLSSIENSESDSSEAKEE
SSKKKRSGKWKSKSNDSVDIEDQEEKVIKQECVNVENQTLDYKANSEVGRDLKSLICEQK
DENTIVTPKDSTVSSDVLQVSDDVSTAYEGKSKTNKCTEYSVLDPSVPDSNLRTRNASKR
LQKRDSIENNNVGESSKIGTSDISLLSEKTLQTLECQHKRSRRVRRSKGCDCCGEKSQPQ
EKSFIGLKSTENYDVKASETKKTDTHTPVTVSETSKANLCSEVKLLDEHNCVNFHLGLKE
VNDTVNDSLIISENELENTIQNPLPSGVVNFEEETCDMDSEEATPLESQEPSNNKCRTVS
PCLGDSKDNSLGCSTLETKEEKSEAVLEKELSIENIVNVETDGCKANAKSNPEVEAIELG
VEIDKSEASFSEQESTKTGISEEEVMEINSDRSDESDAEAAEKLKAEEAVTEEFNSVVDH
YDNTTEMSALVEIPEQTAVGELDERSDESGPGSSEGVNAEMETCEETVIGEVSAETDQVN
ETEGQDSTTRISTKPVQAETETSSMEVSSFVLTTLGMSTEEGKVDSNETETKNELSKSEE
AVSAENQMVGNDEILQEAHHTSEKVEDTSQSLTSETAISELTTEDNNASPQKLRELDPLL
VSANGSPIGMQTRCVWSPLASPSTSILKRGLKRPQEDEISSPVHKVRRVSFADPIYQAGL
ADDIDRRCSIVRSHSSNNSPIVKSVKTSPTAQSKHNATSTKGFLSPGSRSPKFKSSKKCL
ITEMAKESMPGPTESIYPALVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLST
LTASEIKTLPIRSPKVSNVKKALRIYHEQQVKSRGLEEIPVFDISEKQVNGIQTKSLPSD
EERLASDLIDPVALETPLPKNLVAQISALALQLDSEDLHNYSGSQLFEMHEKLGSMANSI
IKNLQSRWRSPTHENSV
NT seq
7434 nt
NT seq
+upstream
nt +downstream
nt
atgacggccccggctgagagccccctggcgccgctgttggagaccttggaggacccttcc
gccccccatggagagcaaaccgacgcttacctgaccctgaccagtcgaatgactggagaa
gatggaaaagaagtcattatggaaattgagaaaaaacttcctcagctattcagagtttta
aaaatgcacatttccagtcagaattcagacctctgtagtgctgctctacaggccttgggg
ttttgcttatataatcccaaaattacctcaggattatcagagacagatactcaagaactg
cttttaaaattgaatgatagtgttaaaagcccagacaaaaatgtacgtactagggcactt
tgggtgatatccaagcagacatttcctgctgaagtcattggcaaagtagtatccagtata
attgattcattagaaatagtatttaataaaggagagatgcattctgcagttgttgattat
gaagcattaaatgtcatcataaggctaattgaacaagccccagttcaaatgggagaagag
tcagttaggtgggcaaaactggtcatacctttagtggttcattcagctcagaaggtacat
ttgcggggagcaactgctctagagatgggaatgccattgttgcttcagaaacaacaagag
atagcatctatcacggagcagcttatgactactaaattactttcagaactccaaaagttg
tttatgagtaagaatgagacttatgttttaaaattgtggcctttgtttgtcagacttctt
gggaagacgttgcatcgaagtgggagtttcattaattctctattacagctggaagaacta
ggatttcgtagtggagctcccatgattaaaaaaatagcttttattgcttggaagagttta
atagataattttgctttgaatccagaaatactatgcagtgcaaaaagactgaagttgtta
atgcagcctttgagttccatccacgtgagaacagaaactctagcactaacaaagctagaa
gtctggtggtatctgctgatgagacttggacctcaccttcctgctaattttgaacaggtg
tgcgtgcctctgattcaaagtacgataagcatcgattccaatgcttcacctcaaggcact
tcatctcgtgtagctgcttctccaggtttaaatcctataactcctatacacaaaggtgct
tccccatacggaactcctgtaactccccggatgaacttaagttcaaattttggtggaatg
gccacaatcccctctattcaacttttgggacttgaaatgctgcttcattttttgttgggt
ccagaagtcttgagttttgcaaagcaaaacaaactcgtactgagcttagagccacttgaa
catgcgttaatcagcagctcttcttttttttctaaacatgcaaatacactcatcactgct
gttcatgatagctttgttgcagttggaaaagatgcttctgatgcagttgtcaatgctatt
tggaaggagctgatcagcttgatgaagtcagttattgaatcaggtaacaaaaaagagaga
ccaggttctgaagttttgaccctgttattaaaatctttagaaagcatagtgaagtcagaa
gtatttcctgcgtcaaaaacactggtcctcatggaaattacaattaaaggactgccccag
aaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggaactcct
gctttgttcttaattcagttaatttttaacaataatctcttggaatctggtatagaagat
gagaggttttttctcaatctggaaacactcgttggctgtgtcctttccggtccaacttca
ccactagctttcagtgactctgttttaaatgttattaatcaaaacgcaaaactgttgcaa
aacaaggagcatctctggagaatgtggagtattatagttaccccattaactgaattgata
aatcagaccaatgaagtgaatcaaggtgatgccttagaacataattttagtgccatatat
ggtgcattgactttaccaataaaccatattttttcagtacagaaatttccagtggctacc
atgaagaccttacttaaaacttggtcagaattatatagagcgtttgcccgctgtgctgct
ttggtagcaactgccgaagagaatttgtgctgtgaggagctttcttccaagataatgtcc
tgtttagaagattcaggcttttcaaatttgttgttcttggataggatcattcacatagtt
actgtaatgattgattgcattgacttctcaccatacaatattaagtatcagcccaaagtt
aaatcaccacagagaccttcagattggtccaaaaagaagaaggaacctctagggaaattg
gcctctttatttaaacttattgtgagagtgatctattctttccacactctgagcttcaag
gaagtacattctgacactctcctcactgtcggcaactcaatcatcagtattctttctaat
gtacttggacgtatttctttgccttctatgatccgaaaaatatttgcaacattaacaaga
cctctggcattattttatgaaaacttaaagcttgatgaagttcctaaagtgtatagttgt
atgagcaacaagttagaaaagctactgggagagataattgcttgtctacacttcagctac
actggaacttatgacagcgaacttcttgaccagatctctccattattatgcataatattt
ttgcacaagaataagcagattagaaaacaaagtgctcagttctggaatgccacgtttgct
aaagtgacaacgttgacttaccctgaagagttaaaaccagtactaagacaagccaaacag
aaatttctgttgcttttacctggtttggaaaatgttgacattacggaggaatccagtgga
ccatactccgattcaacagaaaattcacagttaaatatgaagataagtggcatggaaaga
aaatcaagtggaaaaagagattcttttctggcacaaacaaaggatgcaaaagaaaataag
aaaccaccagtcaaattgaaattagaaccgtcttctacaaaaacaaagagtgaaatgcct
ttggaagaggaaaagtctactgatttcgtgtttatacctccagaaggaaaagaagcaaag
gaaagaatactaacagaacatcagaaagaagtactcaaaacaaagagatacgatattcct
gtcatgtataataatctggatgtttcacaagacactttgttttctcagtatacccaggaa
gagtccatggaaattcctcctctaactgaaaaatcaacggaagataccaaggtgatatat
aaggaggaacaaacagagagggacattgttattcctcaagatgtcacagaaaaccgtgat
atggatgaacatcttgaaaaggcttctctttcagataatgaacgtggttctaatgatgaa
gccagtccagaagtaccaagcagtaataatgactccagaaagaatgctttaatttcatca
aagaaaacaactgaatgttcatctagtgcagaaaatacttctggtgtcaacattagctca
gtttctaatgccatcatttccggaattctcccacagcctacaagtcggaggcaaaccttt
attactttggagaagtttgatggttcagaaaatagaccttttagtccgtctgccttaaat
aatatgtcatcaactgttacagtgaaaaataaccaggaagtcatgggtaaaatagataac
ccaccaaaagcaaagaaaagagaaatggctattgcaaaacctgatgctgaaaaaatagca
catggaattaagagatcaagccgaaggtcaagtaaagctgaacaaacagggaacaaaagg
tctaagctcttaatgagatccgatcaggagaaaaatactcaggaatctattgatggcaca
gtagtcttagaaaataacccacctggtttgcttaatccaacagaatgtgtattagataat
caggctcatctctctgaatctacaatggaggatgaggatacaatgcttaaaccaacaata
gaaaatctggtattactagaaaacagtactgtagaagagaaaacattaggaatcagtttg
gaatccaaagaaaatacacccccagctataataccagcagatcaaatggtagatgaggat
agtcctgttcagataactccaaatcagaaaacgcttagacgatcctcaagacgacgttca
gaaatagcagagcctacccctgagagccaagagaaagaaaataatcatcaaaaaaaagac
agacgtaaggaagaagaaaagacccttcagaaaagtccattgcatgtaaaagatgatgtg
ttacctaagcaaaaactgattgctgaacaaactctacaggaaaatttaattgataaaggg
aataatttacacgagaagacttttggggaaactagcactacttctgaaattgatgaaagt
aaaaaaaagctagaccttgagaatattaagtctgagggagacagtgcccaggacattgta
gataagtcctctgaaaaaccagtaagtggacgaacacgctatcaaacaagaagagcttcc
cagggtttactttccagcattgaaaactcagaatctgatagttctgaggcaaaagaagaa
agttctaaaaagaagagatctggaaagtggaaaagcaaaagcaatgatagtgttgatatt
gaagaccaagaggagaaagtgataaaacaggaatgtgtaaatgttgagaaccagacactt
gattacaaagcaaattctgaagtggggagagacctaaaatctctgatttgtgaacaaaaa
gatgagaatactattgtaactcctaaagattctacagtttcttcagatgtattacaggtt
tctgatgatgtgtcaactgcttatgagggaaaaagtaaaaccaataaatgtacagaatat
tccgttttagacccttctgtgccagattcaaatctaaggactagaaatgccagcaagaga
ttacaaaaacgagattctatagaaaataacaatgtgggagaatcctcaaaaatagggaca
tcagacatttccttgctatctgaaaaaactttgcaaacacttgaatgccaacataagaga
agtaggagggtaagaagatctaaaggttgtgattgctgtggagaaaaatctcagcctcag
gaaaagtcgttcattgggttaaagagtacagaaaattacgatgtaaaagccagtgaaaca
aaaaagacagatacgcatacacctgtaactgtatcagagacttctaaagctaatctgtgc
tctgaggtaaaacttttggatgaacataattgtgtgaattttcatttgggactcaaggag
gtgaatgacactgttaatgattcattaattatatctgaaaatgagttggaaaatactatc
caaaaccctcttccttctggagtagtcaattttgaagaagaaacttgtgatatggattct
gaagaagcaacacctcttgagagccaagagccatccaataataaatgtagaactgttagt
ccatgtttaggtgattctaaagataattcactgggatgttctactttggagaccaaagaa
gaaaagtcagaggctgtcttggaaaaggaactaagtatagagaacattgtcaatgttgaa
acagatggatgtaaagctaatgcaaaatccaacccagaagtagaagctattgaattgggt
gtagaaattgataaatctgaagctagcttttctgaacaagagagtaccaaaactggtatt
agtgaagaagaagtaatggagataaatagtgacagaagtgatgaatctgatgcagaggca
gctgagaaactgaaggctgaagaagcagtaactgaagaatttaattctgttgttgatcat
tatgataataccacagaaatgagtgctctggtagagatacctgaacaaacagcagttgga
gaattagatgaaagaagtgacgaatctggtccaggctcatctgaaggagtgaatgctgaa
atggaaacttgtgaagaaacagtgattggtgaggtgagcgctgaaactgaccaagtcaat
gaaacagaaggccaggactctactaccagaatctctaccaagcctgtacaggctgaaaca
gagacatcaagtatggaagtcagcagttttgttcttaccacacttgggatgagcactgaa
gaaggaaaagttgactctaatgaaactgaaacaaaaaatgaacttagtaagtctgaagaa
gcagtatcagcggaaaatcaaatggtgggaaatgatgaaattctacaggaagctcaccat
acttcagagaaagtggaggacacatcacagtctctgacatctgaaacagccatctctgaa
ctaacaacagaagacaataatgcatctcctcaaaaattaagggaactagatcctttactt
gtatcagcaaatggcagtcctattggcatgcagacccgctgtgtctggtctcctttggct
tctccatcgaccagtattttaaagagaggactaaaaagacctcaggaagatgagatatcg
tcacctgttcacaaggttcgccgggtctcctttgcagatccaatataccaagcaggattg
gccgatgacattgataggcgatgctctattgttaggtcccattcttcaaataattctccc
atagtaaaaagtgttaaaacttcacctactgcacaatctaagcataatgccacttcaacc
aaaggatttctgtccccaggatcacgtagccctaagtttaagagctcaaagaagtgttta
attacagaaatggctaaagaatctatgccaggtccaacagaaagtatttacccagctttg
gtgaactgtgtggctccagttgatatcattctacctcagattacctcaaacatgtgggca
agaggactgggacagctcattagagctaagaatataaaaacgattggtgatttgagcact
cttacagcatctgaaataaaaactcttcctatccgttctccaaaagtgtccaatgtaaaa
aaggctcttagaatctatcacgagcagcaggtaaaatctcgtggactagaggagattcca
gtttttgatatttctgaaaaacaagtaaatggaatacaaactaaatctctcccttctgat
gaagaaagacttgcctcagatttaattgatcctgttgctttggaaactccattacctaaa
aatcttgtggcacagattagtgcacttgctcttcagctagattcagaagatctccataat
tattcaggaagccagctgtttgaaatgcatgagaaacttggtagcatggcaaactctata
ataaaaaatttgcagtcacgttggaggtcaccaacccatgaaaattccgtttag
DBGET
integrated database retrieval system
