KEGG   Neogale vison (American mink): 122902768
Entry
122902768         CDS       T08764                                 
Symbol
WDR33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
  KO
K15542  polyadenylation factor subunit 2
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    122902768 (WDR33)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvs03019]
    122902768 (WDR33)
Messenger RNA biogenesis [BR:nvs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     122902768 (WDR33)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_IFT122_1st Collagen eIF2A WD40_RFWD3 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_WDR41 Ge1_WD40 PEP5_VPS11_N
Other DBs
NCBI-GeneID: 122902768
NCBI-ProteinID: XP_044098646
LinkDB
Position
3:complement(112311652..112434281)
AA seq 1342 aa
MATEIGSPPRFFHMPRFQHQAPRQLFYKRPDFAQQQAMQQLTFDGKRMRKAVNRKTIDYN
PSVIKYLENRIWQRDQRDMRAIQPDAGYYNDLVPPIGMLNNPMNAVTTKFVRTSTNKVKC
PVFVVRWTPEGRRLVTGASSGEFTLWNGLTFNFETILQAHDSPVRAMTWSHNDMWMLTAD
HGGYVKYWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERIL
RGHGADVKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKLNLNG
NWLLTASRDHLCKLFDIRNLKEELQVFRGHKKEATAVAWHPVHEGLFASGGSDGSLLFWH
VGVEKEVGGMEMAHEGMIWSLAWHPLGHILCSGSNDHTSKFWTRNRPGDKMRDRYNLNLL
PGMSEDGVEYDDLEPNSLAVIPGMGIPEQLKLAMEQEQMGKDESNEIEMTIPGLDWGMEE
VMQKDQKKVPQKKVPYAKPIPAQFQQAWMQNKVPIPAPNEVLNDRKEDIKLEEKKKTQAE
IEQEMATLQYTNPQLLEQLKIERLAQKQAEQIQPPPSSGTPLLGPQPFPGQGPMSQIPQG
FQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGGGGPQGFMGPQGPQG
PPQGLPRPQDMHGPQGMQRHPGPHGPLGPQGPPGPQGNSGPQGHMGPQGPPGPQGHIGPQ
GPPGPQGHLGPQGPPGTQGMQGPPGPRGMQGPPHPHGIQGGPGSQGIQGPVSQGPLMGLN
PRGMQGPPGPRENQGPAPQGMMMGHPPQEMRGPHPPSGLLGHGPQEMRGPQEMRGPQEMR
GMQGPPAQGSMLGPPQELRGPPGSQGQQGPPQGSLGPPPQGGMQGPPGPQGQQNPARGPH
PSQGPIPFQQQKTALLGDGPRAPFNQEGQNAGPPPLIPGLGQQGAQGRIPPLNPGQGPGP
NKGDSRGPPNHHMGPMSERRHEQSSGPEHGPERGPFRGSQDCRGPPDRRGPHPDFPDDFS
RPDDFHPDKRFGHRLREFEGRGGPLPQEEKWRRGGPGPPFPPDHREFSEGDGRGAARGPP
GAWEGRRPGDERFPRDPEDPRFRGRREESFRRGAPPRHEGRAPPRGRDSFPGPEDFGPEE
NFDPSDEAARGRDLRGRGRGTPRGGRKGLLPTPDEFPRFEGGRKPDSWDGNREPGPGHEH
FRDAPRPDHPPHDGHSPASRERSSSLQGMDMASLPPRKRPWHDGPGTSEHREMEAPGGPS
EDRGGKGRGGPGPSQRVPKSGRSSSLDGDHHDSYHRDEPFGGPPGSGTPSRGGRSGSNWG
RGSNMNSGPPRRGTSRGGGRGR
NT seq 4029 nt   +upstreamnt  +downstreamnt
atggctacagaaattggttctcctcctcgttttttccatatgccaaggttccaacaccaa
gcacctcgacaactattttataagcgacctgattttgcacagcagcaagcaatgcaacag
ctcacctttgatggaaaacggatgagaaaagcagtaaaccgaaaaaccatagactataat
ccgtctgtaattaagtatttggagaatagaatatggcaaagagaccagagagatatgcgg
gcaattcagcctgatgcaggttattataatgatctggtcccacctatagggatgttgaat
aatcctatgaatgcagtaacaacaaaatttgttcgaacatcaacaaataaagtaaagtgt
ccggtatttgttgttaggtggactccagaaggaagacggttggtcactggagcttctagt
ggagaattcaccttgtggaatggactcacgttcaattttgaaacaatattacaggctcat
gatagccccgtgagggccatgacttggtcacataatgacatgtggatgttgacagcagac
catggaggatatgtgaaatattggcagtcgaacatgaacaacgtcaagatgttccaggca
cataaggaggcgattagagaggccagtttctcacccacggataataaatttgctacatgc
tctgatgacggcactgttagaatctgggactttcttcgttgccatgaggaaagaattctc
cgagggcatggtgcagatgtaaaatgtgtagactggcatccaacaaaagggttagttgtt
tcaggaagtaaagatagtcaacagccaatcaagttctgggatcccaagactgggcagagt
cttgcaacacttcatgcccataaaaacacagtaatggaagtgaaattaaatctcaatggc
aattggctactcactgcatcacgtgaccacctctgtaaactttttgatatccgaaacctg
aaagaagagcttcaagtcttccgaggtcataagaaagaagccacagctgtggcctggcat
cctgttcatgaaggactttttgccagtggaggttccgatggctctttgttattctggcat
gtgggggtagagaaggaagtgggtgggatggagatggcccacgaagggatgatctggagt
ctggcttggcatcctcttggacatattctctgctcaggttcaaatgaccatactagcaaa
ttctggacccgaaaccgaccaggtgataaaatgcgagatcgatataatctcaacctattg
cctggaatgtctgaagatggagtagaatatgatgaccttgaacctaatagcctggcagta
attccaggaatgggaataccagagcaactaaaattagctatggaacaagagcagatgggg
aaagatgaatcaaatgaaattgaaatgacgattccaggtttggactggggaatggaggag
gtgatgcaaaaggatcagaaaaaagttcctcagaagaaagttccttatgcaaaacctatt
cctgctcagttccagcaggcttggatgcaaaataaagttccaattcctgccccaaatgag
gtactgaatgacagaaaagaggacattaaattggaagagaagaagaaaacacaagcagaa
attgagcaagaaatggccacattacagtatactaacccacagcttctggagcaacttaaa
attgaaagacttgcacagaaacaggctgagcaaattcagcctcctccttcatctggcacc
cctctccttggaccccagccctttccaggacaaggtccaatgtctcagattcctcaaggt
tttcagcagccccatccatctcagcagatgccaatgaacatggctcaaatggggcctcca
ggtccacagggacagtttagaccccctggaccccagggacaaatggggccacaaggtcct
ccgctgcatcagggaggtggggggccacaaggattcatgggaccacaagggccccagggc
ccgccccaggggttgccaaggcctcaggacatgcacgggccccaaggaatgcagaggcac
cctggacctcatggccctttgggacctcaaggaccacctggaccacagggtaattctggt
cctcaaggtcatatgggtcctcagggtccacctggcccacaaggtcacataggccctcaa
ggcccacctgggccccagggtcacttgggtcctcaggggcctcctggtactcaaggtatg
cagggaccacctggtcccagaggaatgcaaggacctcctcatcctcacgggatacaaggt
gggccagggtctcaagggatccagggtcctgtgtctcagggacctctgatgggattgaat
ccaagaggaatgcagggtcctccgggcccccgagaaaatcagggtcctgctccccaaggg
atgatgatgggccatccgcctcaagagatgcgaggacctcaccctccaagtggactgctg
ggacatggccctcaggagatgcgaggccctcaggagatgcgaggccctcaggagatgcga
ggcatgcaggggcctccagcccaagggtccatgctgggccccccccaggaattgcgaggg
cctccaggctcacaaggtcagcaggggccgccccagggctctttggggcctccaccccag
ggtggcatgcaagggccccctggacctcagggacagcagaacccggcaagagggccacat
ccatctcaagggccaataccattccagcaacagaaaacagctctgctaggtgatgggccc
cgggcccccttcaatcaggaaggacagaacgcaggccccccacccctgataccaggccta
gggcagcagggagcacaaggtcgcatcccccctcttaaccctggacaaggacctggccct
aacaaaggtgactcacgcggccctccaaatcatcacatgggccccatgtcagagaggcgg
catgagcagagcagcggccctgagcacgggcctgagagggggcctttccggggcagccag
gactgcaggggtccccctgataggcgtggccctcaccccgacttccctgatgacttcagc
agaccagatgacttccatccggacaagcgctttggccaccgattacgtgaatttgagggg
cgaggaggacctttaccacaagaagagaagtggaggcgtgggggccctgggcctccgttt
ccgcctgatcacagggaattcagcgagggggatggccggggagcagcccggggccctccg
ggggcttgggaaggccgcagacctggagatgaacgattcccccgggatcctgaggacccg
cgttttcgagggcgcagagaagaaagctttagaagaggagcacccccaagacatgagggc
cgtgcccctcccagagggagggacagttttcctggtcctgaggactttggtccagaggag
aattttgatccttctgatgaagcagcccgaggaagagatcttagaggtcgaggtcggggt
accccacgaggaggaaggaagggtttactccccactcctgatgagttccctcgctttgaa
ggaggacggaaaccagactcctgggatggaaatagagagccaggtccaggtcatgaacat
tttcgtgatgctcctcgccctgatcatccccctcacgatggtcattccccagctagcaga
gaacgttcctcttctctccagggcatggacatggcatccttgccaccccgaaagcgtccc
tggcatgatgggccagggacctcagagcacagagaaatggaagccccagggggtccttct
gaggatcgaggaggcaaaggccgagggggcccaggaccttcccagagagtgccaaaatcc
gggcgttccagctccttggatggagaccaccatgacagctaccacagagatgaacctttt
gggggccctccaggcagcggtactccttccagagggggccgaagtggcagtaactggggt
agagggagtaacatgaactctggcccaccaaggcgaggaacttcaaggggtggtggaagg
ggtaggtag

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