KEGG   Neogale vison (American mink): 122902859
Entry
122902859         CDS       T08764                                 
Symbol
WDR7
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
  KO
K24738  rabconnectin-3b
Organism
nvs  Neogale vison (American mink)
Pathway
nvs04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    122902859 (WDR7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:nvs04131]
    122902859 (WDR7)
Membrane trafficking [BR:nvs04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    122902859 (WDR7)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML CFAP251_N WDR55 ASA1 EIF3I ANAPC4_WD40 Beta-prop_VPS8 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_ACSF4 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_Aladin Beta-prop_IFT140_1st PAC11 Beta-prop_SCAP PEP5_VPS11_N Beta-prop_WDR19_1st WDR72_alpha-sol Ge1_WD40 WDR90_beta-prop_4th Beta-prop_Vps41 Tricorn_2nd PD40 Beta-prop_DCAF4 Arminin
Other DBs
NCBI-GeneID: 122902859
NCBI-ProteinID: XP_044098840
LinkDB
Position
3:complement(141730225..142097926)
AA seq 1487 aa
MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGTTIVTGCHDGQICLWDLSIELEVNPRALL
FGHTASITCLSKACASSDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGNQREGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SATGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSRYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYKLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDRTDKGLLICPPVTRFFCGFKEHLHKLLIQGDSSGRLNIWNISD
TPDKQEELKMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSNEPLKVTASVYIPAHGRLVC
GREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQR
YLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVG
LLSLREKKCIMLASRHLFPIHVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITA
VEILNACDEAVPAAVDSLSHPAVNLKQAMTRRSLAALKNMAHQKLQTLATNLLASEASDK
GNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKA
SGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEMMRQRREESDPEYRSS
KSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGH
MSLMLPGYNQPARKLSHGKAEVERKLPATESVGKGTYGVSRAVTTQHLLSIISLANTLMS
MTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNVVQGQIKQVPAPVISARSDADH
SGSDPASTPALHTCFLVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRCLEV
REAAQALLLAELRRIEQAGRKEAIDAWAPYLPQYMDHVISPGVSAEAMQTISTAPDTLGP
EAKVQEEEHDLADDDITTGCLSSIPQMKKISTSYEERRKQATAIVLLGVIGAEFGAEIEP
PKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTCKALTFLLLQPPSPKLPPHSTIRRTAID
LIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLSPAADSARSARHALSLIA
TARPPAFITTIAKEVHRHTALAANTQSQQNMHTTTLARAKGEILRVIEILIEKMPTDVVD
LLVEVMDIIMYCLEGSLVKKKGLQECFPAICRFYMVSYYERNHRIAVGARHGSVALYDIR
TGKCQTIHGHKGPITAVAFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSAPQLRC
IKTYQVPPVQPASPGSHNALRLARLIWTSNRNVILMAHDGKEHRFMV
NT seq 4464 nt   +upstreamnt  +downstreamnt
atggcaggaaacagccttgtcctacccatcgttctttggggtcgcaaagcaccaacacat
tgcatctcagcagtacttttaacagatgacgggaccacaattgtaactggatgccatgac
ggacaaatatgtctctgggatctttcgatagaattagaagttaatcctcgagcactgttg
tttggtcacacagcctcaatcacctgtttgtctaaagcttgtgcttctagcgacaaacag
tatatcgtgagtgcatctgaaagtggagagatgtgtctctgggacgtgaatgatggcaga
tgtattgagtttacaaaattagcctgcacacatacaggcatacagttctaccagttttct
gttggaaatcagcgggaaggaaggcttttatgccatggccactatcctgaaatcctcgtt
gtggatgccaccagccttgaggtgttatactccttagtatcaaagatctctccagactgg
attagctccatgagtattatccgatcccaccgaacacaagaggacactgtggtcgcactc
tcagcaacgggcatcttgaaggtctggatcgttacctctgaaataagtggcatgcaggat
actgagccaatatttgaggaggagtccaaaccgatttattgtcagaattgccaaagcatt
tctttttgtgcattcacacaaaggtcacttttggttgtgtgctccagatattggagggta
tttgatgctggagactattccttgctgtgttcgggtcctagtgaaaatggacaaacgtgg
actggaggtgactttgtgtcagcagataaagtcatcatttggactgaaaatggacaaagt
tatatttacaaactacctgccagttgccttccagctagtgattcattccgcagtgatgtg
gggaaagcagttgaaaatttaattcctcctgtgcaacatagcctcttggatcgaacagat
aaagggttgctgatttgtcctcctgttactcggttcttctgtggattcaaggaacacctc
cataaactattaattcagggtgattcttcaggaagattgaatatttggaacatatcagac
acacctgataaacaggaagagctaaaaatgacaacttctattagtttgcaagaggcattt
gataaactgaatccttgtcctgctggaattatagatcagctgagtgtgattcccaatagt
aatgagcctcttaaagtaaccgcaagtgtgtacataccagcacatggacgacttgtttgt
ggccgtgaggatggaagcatcattattgtacctgccacacagacggccatagtacagctg
ctgcaaggggaacacatgctccgaagaggttggccacctcacagaacacttcgcggtcat
cggaacaaggtcacatgtttgctgtatcctcatcaggtctcagctcgttatgaccaaaga
tacctgatatctggaggcgtggatttttccgtcataatttgggacatattttctggagaa
atgaaacatatcttctgtgtgcatggtggtgagattactcaacttctagttccacctgaa
aactgtagtgcaagagtacagcactgcatctgttctgtagccagtgaccactcagtggga
ctcctaagcctgcgggagaagaaatgcattatgctggcatctcgtcatctcttccccatt
cacgtcatcaagtggaggccttctgatgattacctggtcgtggggtgttcagatggctct
gtatacgtctggcagatggatactggcgccttggatcgctgcgtgatggggatcacagca
gtggagatactgaatgcctgcgatgaagcagtgcctgctgcagtggactctctcagtcac
ccggcagtcaacctcaaacaggccatgacacggcgcagcctggctgctcttaaaaacatg
gcccatcaaaagctgcagactcttgcaactaacctcttggcttccgaggcctctgacaaa
ggaaatttgcctaaatattctcataactccctgatggttcaagcaataaagacgaaccta
acagacccggacatacatgtgcttttctttgatgtggaagcgttgattattcaactcctg
actgaagaagcctctaggccgaatactgcgcttatttccccagagaatttgcaaaaagca
tctggcagttcagacaaagggggctcttttctaactggaaaacgagcagcagttctcttc
caacaagtgaaagaaactatcaaagagaacataaaggaacatctccttgatgatgaagag
gaggacgaggagatgatgaggcagagaagagaagagagcgatccagagtatcggtccagc
aaatctaagccattgaccctattagaatataatttaacaatggacactgcaaaattgttc
atgtcgtgtcttcatgcctggggtttaaatgaagttctggatgaagtttgccttgatcgc
cttggaatgctgaaaccgcattgcacagtatcttttggtctcctatccagaggaggtcat
atgtccctgatgcttcctggttataatcagcctgctcggaaactgtcacatgggaaagca
gaagtagaaaggaagctgcctgcaactgagagcgttggaaagggaacttacggagtgtcc
cgagccgtcactacacagcatctcctgtctatcatatctttggcaaatacgttaatgagt
atgactaatgcaacttttattggtgatcatatgaagaagggtcctaccaggccacctcga
ccaagcaccccagacctttctaaggcaaggggttcccctccaacttccagtaatgttgtg
caaggacagattaaacaagtacctgctcctgtcatttccgctcggtctgatgctgaccac
tctggctctgaccctgcttctactcctgctttacatacctgtttcttagtaaatgaagga
tggagtcagttggctgctatgcactgtgtgatgctaccagacctgctgggactggataaa
tttaggcccccacttctagagatgctggcccgaagatggcaggatcgatgcttggaggtc
agagaagccgcccaggccctgcttctcgctgaactgcgaagaattgagcaggcgggacgg
aaggaagccatcgatgcctgggccccttatttacctcagtatatggaccacgtcatatca
cctggagtctcagcagaagccatgcagactatcagcactgctcctgataccttggggcca
gaagccaaagtccaggaggaagagcatgaccttgcagatgatgacatcacaactggttgc
ttatcaagtatcccacaaatgaaaaagatttccacatcttatgaggaaagacggaagcaa
gctactgctattgttctactaggcgtaataggagctgaatttggtgctgaaattgaacct
cctaaattgttgaccagacctcgaagctctagtcaaattcctgagggatttggcttgact
agtggtggatccaactactcacttgccagacatacttgtaaggcactgacatttcttctg
ctgcagcccccgagccccaaacttcctccacacagtacgatccgaagaacagccatcgat
ctgattggacgtggtttcacagtctgggagccttacatggacgtgtctgctgtcctcatg
gggcttctcgaactctgtgctgatgccgagaagcagcttgccaacatcacaatggggctg
cctcttagccctgcagctgactccgcccgctctgcgaggcatgccctctcgctcattgcc
actgccagaccacccgccttcattacaactatagccaaagaggtgcacagacatacagct
cttgcagcaaatacccagtcgcaacagaacatgcacacaacaactcttgcacgagctaaa
ggggaaattctgagagtcattgagattcttattgaaaagatgcccacggatgttgtggat
cttctcgtggaggttatggacatcattatgtactgccttgaaggatctttagttaaaaag
aaaggtcttcaagaatgtttccccgccatctgcaggttctacatggtcagctattatgag
cggaatcacagaatagcggttggagctcgccatggttcagtggccctgtacgacatccgg
actggaaaatgtcagacaatccatggacacaagggaccaatcacggccgtggcctttgct
cctgatggacgatatcttgccacctactcaaatacggacagccacatttctttctggcag
atgaacacctcgctgctggggagcatcggcatgctcaactcggccccccagctgcgctgc
attaagacctaccaggtgccgcccgtgcagcccgcctcgcccggctcccacaacgccctc
agactggcccgcctcatctggacttccaaccgcaatgtcatcctcatggcgcacgacggg
aaggagcaccgcttcatggtctaa

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