Neogale vison (American mink): 122903086
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Entry
122903086 CDS
T08764
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1 isoform X1
KO
K13885
scavenger receptor class B, member 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03272
Virion - Hepatitis viruses
nvs04145
Phagosome
nvs04913
Ovarian steroidogenesis
nvs04925
Aldosterone synthesis and secretion
nvs04927
Cortisol synthesis and secretion
nvs04934
Cushing syndrome
nvs04975
Fat digestion and absorption
nvs04976
Bile secretion
nvs04977
Vitamin digestion and absorption
nvs04979
Cholesterol metabolism
nvs05160
Hepatitis C
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
122903086 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122903086 (SCARB1)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
122903086 (SCARB1)
04925 Aldosterone synthesis and secretion
122903086 (SCARB1)
04927 Cortisol synthesis and secretion
122903086 (SCARB1)
09154 Digestive system
04976 Bile secretion
122903086 (SCARB1)
04975 Fat digestion and absorption
122903086 (SCARB1)
04979 Cholesterol metabolism
122903086 (SCARB1)
04977 Vitamin digestion and absorption
122903086 (SCARB1)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
122903086 (SCARB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
122903086 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122903086 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122903086 (SCARB1)
Membrane trafficking [BR:
nvs04131
]
Endocytosis
Phagocytosis
Scavenger receptors
122903086 (SCARB1)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122903086 (SCARB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Glyco_hydro_1
Motif
Other DBs
NCBI-GeneID:
122903086
NCBI-ProteinID:
XP_044099464
UniProt:
A0A8C7BW89
LinkDB
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Position
3:complement(198793126..198867288)
Genome browser
AA seq
509 aa
AA seq
DB search
MGSRARTRRAVAVLGFAGLLCAVLGAVMIVVVPTLIKQQVLKNVRIDPSSLSFNMWKEIP
VPFYLSIYFFDIVNPDAILLGEKPQVRERGPYVYREFRHKSNITFNGNDTVSFLEYRSFQ
FQPDKSHGLESDYIVMPNILVLAAAMMMENKPMSMKLIMTLAFSTLGERAFMNRTISEIM
WGYDDPLIHLINKYLPDVFPFKGKFGLFAELNNSNSGLFTVFTGVKDFSRIHLVDKWNGL
SKVSFWHSDQCNMINGTSGQMWAPFMTPETSLQFYSPEACRSMNLVYKESGMFEGIPTYR
FVAPSTLFANGSVYAPNEGFCPCLESGIQNISTCRFNAPLFLSHPHFYNADPVLAEAVLG
LHPNQEEHSLFLDVHPVTGIPMNCSVKLQLSLYIKAIKGIGQTGKIEPVVLPLVWFEESG
AMEGEPLQTFYNQLVLMPSVLHYAQYVLLALGCVLLLIPIIHQIRSQEKCYLFWSSSKKG
SKDKEAIQAYSESLMTSAPKGTVLQEARL
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcagccgcgccagaacgcgccgcgcggtcgcggtgctgggcttcgctgggctgctg
tgcgccgtgctgggagccgtcatgatcgtggtggtgcccacgctcatcaagcagcaggtc
ctcaagaatgtgcgcatcgaccccagtagcctgtccttcaacatgtggaaggagatcccc
gtccccttctacctgtccatctacttcttcgacatcgtcaaccccgacgccatcctcctg
ggggagaagccgcaggtgcgggagcgcgggccctacgtgtacagggagttcaggcacaag
agcaacatcaccttcaatggcaatgacacggtgtcattccttgagtatcgcagcttccag
ttccagcctgacaagtcccatggcctggagagcgactacattgttatgcccaacatcctg
gtcttggccgcggcgatgatgatggagaataaacccatgagcatgaagctgatcatgacc
ttggcgttcagcacgctgggggagcgcgccttcatgaaccgcaccataagcgagatcatg
tggggttatgacgatcccctcatacacctcatcaacaagtacctcccagatgtgtttcca
ttcaagggcaagtttgggctatttgcagagctcaacaactccaattcagggctcttcacc
gtgttcacgggggtcaaagacttcagcaggatccacctcgtggacaagtggaacggactt
agcaaggtcagcttctggcattctgatcagtgcaacatgatcaacgggacctcgggacag
atgtgggcgccgttcatgactccggaaacctcactgcaattctacagccccgaggcttgc
cggtccatgaacctggtctacaaggagtcggggatgtttgaaggcatccccacctatcgc
ttcgtggcccccagcaccctgtttgccaacggctctgtctacgcgcccaacgagggcttc
tgcccgtgcctggagtccggaattcagaacatcagcacctgcagattcaacgcgcccttg
tttctctcccaccctcacttctacaacgccgacccggtgctggccgaggcagtgttgggc
ctccatcccaaccaggaggagcattccttattcctggatgtccacccggtcaccgggatt
cccatgaactgctctgtgaaattacagctgagcctgtatatcaaagcaatcaaaggcatc
ggacaaacggggaagatcgagcctgtggtcctgccgctggtgtggttcgaagagagcggg
gcaatggaaggtgagcccctgcagaccttctacaaccagctggtgttgatgcccagtgtg
ttgcactacgcccagtacgtcctccttgccctgggctgcgtcctgctgctcatccctatc
atccaccagatccggagccaagagaaatgctatttattttggagtagtagtaaaaagggc
tcaaaggataaggaggccattcaggcctattctgaatccctgatgacatcagctcccaag
gggactgtgctacaagaagcaagattgtag
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