KEGG   Neogale vison (American mink): 122903087
Entry
122903087         CDS       T08764                                 
Symbol
UBC
Name
(RefSeq) LOW QUALITY PROTEIN: polyubiquitin-C
  KO
K08770  ubiquitin C
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03320  PPAR signaling pathway
nvs04120  Ubiquitin mediated proteolysis
nvs04137  Mitophagy - animal
nvs04140  Autophagy - animal
nvs05012  Parkinson disease
nvs05022  Pathways of neurodegeneration - multiple diseases
nvs05167  Kaposi sarcoma-associated herpesvirus infection
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122903087 (UBC)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    122903087 (UBC)
   04137 Mitophagy - animal
    122903087 (UBC)
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    122903087 (UBC)
 09160 Human Diseases
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    122903087 (UBC)
  09164 Neurodegenerative disease
   05012 Parkinson disease
    122903087 (UBC)
   05022 Pathways of neurodegeneration - multiple diseases
    122903087 (UBC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:nvs04121]
    122903087 (UBC)
Ubiquitin system [BR:nvs04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   122903087 (UBC)
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD
Other DBs
NCBI-GeneID: 122903087
NCBI-ProteinID: XP_044099467
LinkDB
Position
3:complement(198894132..198898782)
AA seq 1222 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGPLTSXEADL
AGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAK
IQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTI
TLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL
RGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLS
DYNIQXESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGXPPDQQ
RLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIEN
VKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTXLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQXESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEV
GRTLSDYNIQXESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIF
VKTLTGKTITLEVEPSDXIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
STLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGK
QLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD
KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLE
VEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
MQIFVKTLTGKTITLEVEPSDTIENVKGKIQEKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGVLSSPF
NT seq 3669 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctgacgggtaagaccatcaccctagaggtggagcccagt
gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccag
cagaggctgatctttgctggaaaacagctggaggatgggcgcaccctgtccgactacaac
atccagaaggagtccaccctgcacctggtcctccgcctcagagggggcatgcagatcttc
gtgaagaccctgaccggtaagaccatcaccctggaggtggagcccagtgacaccatcgag
aacgtcaaggcgaagatccaggacaaggagggccccctgaccagcnnagaggctgatctt
gctgggaaacagctggaggatgggcgcaccctgtccgactacaacatccagaaggagtcc
accctgcacctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctgacc
ggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcgaag
atccaggacaaggagggcatcccccctgaccagcagaggttgatctttgctgggaaacag
ctggaggatgggcgcaccctgtccgactacaacatccagaaggagtccaccctgcacctg
gtcctccgcctcagagggggcatgcagatcttcgtgaagaccctgaccggtaagaccatc
accctggaggtggagcccagtgacaccatcgagaacgtcaaggcgaagatccaggacaag
gagggcatcccccctgaccagcagaggctgatctttgctgggaaacagctggaggatggg
cgcaccctgtccgactacaacatccagaaggagtccaccctgcacctggtcctccgcctc
agagggggcatgcagatcttcgtgaagaccctgaccggtaagaccatcaccctggaggtg
gagcccagtgacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccc
cctgaccagcagaggctgatctttgctgggaaacagctggaggatgggcgcaccctgtcc
gactacaacatccagnaggagtccaccctgcacctggtcctccgcctcagagggggcatg
cagatcttcgtgaagaccctgaccggtaagaccatcaccctggaggtggagcccagtgac
accatcgagaacgtcaaggcgaagatccaggacaaggagggcnatccccccgaccagcag
aggctgatctttgctgggaaacagctggaggatgggcgcaccctgtccgactacaacatc
cagaaggagtccaccctgcacctggtcctccgcctcagagggggcatgcagatcttcgtg
aagaccctgaccggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaac
gtcaaggcgaagatccaggacaaggagggcatcccccccgaccagcagaggctgatcttt
gctgggaaacagctggaggatgggcgcaccctgtccgactacaacatccagaaggagtcc
accnncctgcacctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctg
accggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcg
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgctgggaaa
cagctggaggatgggcgcaccctgtccgactacaacatccagnaggagtccaccctgcac
ctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctgaccggtaagacc
atcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcgaagatccaggac
aaggagggcatcccccctgaccagcagaggctgatctttgctgggaaacagctggaggtt
gggcgcaccctgtccgactacaacatccagnaggagtccactctgcacctggtcctccgc
ctcagagggggcatgcagatcttcgtgaagaccctgaccggtaagaccatcaccctggag
gtggagcccagtgacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatc
ccccccgaccagcagaggctgatctttgctgggaaacagctggaggatgggcgcaccctg
tccgactacaacatccagaaggagtccactctgcacctggtcctccgcctcagagggggc
atgcagatcttcgtgaagaccctgaccggtaagaccatcaccctggaggtggagcccagt
gacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatcccccccgaccag
cagaggctgatctttgctggaaaacagctggaggatgggcgcaccctgtccgactacaac
atccagaaggagtccaccctgcacctggtcctccgcctcagagggggcatgcagatcttc
gtgaagaccctgaccggtaagaccatcaccctggaggtggagcccagtgacnacatcgag
aacgtcaaggcgaagatccaggacaaggagggcatcccccctgaccagcagaggctgatc
tttgctgggaaacagctggaggatgggcgcaccctgtccgactacaacatccagaaggag
tccaccctgcacctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctg
accggtaagaccatcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcg
aagatccaggacaaggagggcatcccccctgaccagcagaggctgatctttgctgggaaa
cagctggaggatgggcgcaccctgtccgactacaacatccagaaggagtccactctgcac
ctggtcctccgcctcagagggggcatgcagatcttcgtgaagaccctgaccggtaagacc
atcaccctggaggtggagcccagtgacaccatcgagaacgtcaaggcgaagatccaggac
aaggagggcatcccccccgaccagcagaggctgatctttgctgggaaacagctggaggat
gggcgcaccctgtccgactacaacatccagaaggagtccactctgcacctggtcctccgc
ctcagagggggcatgcagatcttcgtgaagaccctgaccggtaagaccatcaccctggag
gtggagcccagtgacaccatcgagaacgtcaaggcgaagatccaggacaaggagggcatc
ccccctgaccagcagaggctgatctttgctgggaaacagctggaggatgggcgcaccctg
tccgactacaacatccagaaggagtccaccctgcacctggtcctccgcctcagagggggc
atgcagatcttcgtgaagaccctgaccggtaagaccatcaccctggaggtggagcccagt
gacaccattgagaatgtgaaagggaagattcaagagaaagagggcatcccccctgaccag
cagaggttgatctttgctgggaaacagctggaagatgggcgcaccctgtccgactacaac
atccagaaggagtccactctgcacctggttctgcgcttgaggggtggtgtcttaagttcc
cccttttaa

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