Neogale vison (American mink): 122903110
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Entry
122903110 CDS
T08764
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03030
DNA replication
nvs03410
Base excision repair
nvs03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122903110 (POLE)
03410 Base excision repair
122903110 (POLE)
03420 Nucleotide excision repair
122903110 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvs03032
]
122903110 (POLE)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122903110 (POLE)
Enzymes [BR:
nvs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
122903110 (POLE)
DNA replication proteins [BR:
nvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
122903110 (POLE)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
122903110 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
CENP-B_dimeris
APP_N
Motif
Other DBs
NCBI-GeneID:
122903110
NCBI-ProteinID:
XP_044099519
LinkDB
All DBs
Position
3:complement(203508990..203555797)
Genome browser
AA seq
2293 aa
AA seq
DB search
MVLRNTGRRRAEPGPDGEASRDDGPSSSVSALKRLERSQWTDKMDLRFGFERLKEPSEKT
GWLINMHPTEILDEDKRLVSAVDYYFIQDDGSRFKVALPYKPYFYIATRKGCEREVSSFL
SKKFQGKIAKIETVPKEDLDLPNHLVGLKRNYVKLSFNTVEDLVRVRKDISPAVKKNQEQ
GHASDAYTAMLSSVLQGSSVVIDEEEASKKVTDQWDNIVDMREYDVPYHIRLSIDLKIHV
AHWYDVRYRGSAFPVEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMI
DGQGYLITNREIVSEDVEDFEFTPKPEYEGPFCVFNEPDEVHLLQRWFEHVQETKPTIMV
TYNGDFFDWPFVEARAAVHGLNMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVG
SHNLKAAAKAKLGYDPVELDPEDMCRMATEQPQTLATYSVSDAVATYYLYMKYVHPFIFA
LCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQEFNKLTDDGHVLDAETYV
GGHVEALESGVFRSDIPCRFRMNPAAFDFLLQRVEKTMRHAIEEEEKVPMEEVTNFQEVC
DQIKTKLTSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAVVDEATCAACDFNKPG
ADCQRKMAWQWRGEFMPASRSEYHRIQHQLESEKFPPLSADGPARAFHELSREEQAKYEK
RRLADYCRKAYKKIHVTRVEERLTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLS
AAMELGDAAEVKRCRNMEVLYDSLQLAHKCILNSFYGYVMRRGARWYSMEMAGIVCFTGA
NIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKTTSVKKPKLTISYPGAMLNIM
VKEGFTNDQYQELTEPSSLSYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFN
EDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGSTLEEVYSSVAKVADYWLDVLYSK
AANMPDSELFELISENRSMSRKLEDYGEQKSTSISTARRLAEFLGDQMVRDAGLSCRYII
SRKPEGSPVTERAIPLAIFQAEPTVRKHFLRKWLKSSSLQDFDIRTILDWDYYIERLGSA
IQKIITIPAALQQVKNPVPRVKHPDWLHKKLLEKNDVCKQKKISELFVLEGRRQVGTAQA
PQGTQSLGAPDMEDFGLVKPPHSAVPVATKRKRVLWESQEESQDLELTVPWQEILGQPPA
LGTTQEEWLVWLRFHKKKWQLQARQRLARKKRRRLEVAEGEPVPGAIRDRPATGLGIFLR
RTARSILDLPWQIVQISETSQAGLFRLWAVIGSDLYCIRLNIPRVFYVNQRVAKAEEGPS
YRKVSRALPRSNVVYNLYEYSVPEDMYQEHINEINTELSAPDIEGVYETQVPLLFRALVQ
LGCVCVVNKQLVRHLSGWEAETFALEHLEMRSLAQFSYLEPGSIRHLFLYHHAQGHKALF
GLFVPSQRRASVFVLDTVRSNQMPSLGALYSAEHSLMVEKVGPELLPPPKHTFEVRAETD
MKTICRAIQRFLLAYKEERRGPTLIAVQSNWELKRLAGEVPVLEEFPLVPVHVADRISYG
VLDWQRLGARRMIRHYLNLDTCLSQAFEMSRYFHIPIGNLPEDISTFGSDLFFARHLQRH
SHLLWLSPTSRPDLGGKEADDNRLIMEFDDQASVEINCPGCYSTVCVELDLQNLAVNTIL
QSHHINDMEGADSVGISFDVLQQASLEDMITGNQAASALASYDETALCSSTFRILKSMVV
GWVKEITQYRNVYADNQVMHFYRWLRAPSSLLHDPALHRTLHSMMKKLFLQLIAEFKRLG
SSVVYANFNRIILCTKKRRVEDALAYVEYVTNSIHSKELFHSLTISFSRSWEFLLWMDPS
NYGGIKGSVLPRIHCGQDTAGAGAASQRGSPEEGREEEEEEEEEAEAEEEEGDSAPEPDV
EDKLENNWNIVQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRSAPGSTPLRRRGPSQ
LSQDAPAAGALPGMITFSQDYVANELTQSFFSITQKIQKKVTGSRNSVELSSMFPRLPGS
HLLLNNPALEFVKYVCKVLSLDTNITNQVNKLNRDLLRLVDVGEFSEEAQFRDPCRSYVL
PEVICRSCNFCRDLDLCKESSFSQDGAILPQWLCSNCQVAYDTSVIEMALVEALQKKLMA
FTLQDLICSKCRGVKEANMPVYCSCAGAFALTIRTKVFMEQIGIFQNIAQHYGMSYLMET
LEWLLQKNPELGQ
NT seq
6882 nt
NT seq
+upstream
nt +downstream
nt
atggttctgaggaacaccgggcggcggcgcgcggaaccgggcccggacggcgaggccagc
cgggacgatggcccctcttcctccgtctcagcacttaagcgcctggagcgcagccagtgg
acggataagatggatttgcggtttggctttgagagactcaaggagcccagtgagaagaca
ggctggcttatcaacatgcaccctactgagattttagatgaagacaaacgcttagtcagt
gcagtggattactactttattcaagacgacgggagcagatttaaggtggccttgccctac
aagccgtatttctacattgcgaccaggaagggttgtgaacgagaagtttcatcttttctc
tccaagaagtttcagggaaaaattgctaaaatagagactgttcccaaggaggacctggac
ttgccaaatcacttggtcggtttgaagcggaattacgttaagctgtccttcaacaccgtg
gaggatctcgtcagagtgaggaaggacatctcccctgctgtgaagaagaaccaggagcag
ggccacgccagtgacgcctacacagccatgctctccagtgtcctgcaagggagcagtgtg
gttattgatgaagaggaagcctccaagaaggtcaccgaccagtgggacaacattgtagac
atgcgagagtatgacgtgccctaccacatccgcctctccattgacctgaagatccacgtg
gctcactggtacgatgtcagataccgaggaagtgcctttcccgtggaaatcacccgacga
gatgaccttgttgaacgacccgaccctgtggttttggcatttgacattgagaccaccaaa
ctgcccctcaagtttcccgatgcagagactgaccagattatgatgatttcctatatgatt
gatggtcagggctacctcatcaccaacagggagatcgtttcagaagatgtggaagatttc
gagttcacccccaagccagagtatgagggacctttttgtgtcttcaatgaacccgatgag
gttcacctactccagagatggtttgaacatgtccaggagaccaaacccaccatcatggtc
acctacaacggggacttttttgactggccgtttgtggaggccagagcagcggtccacgga
ctgaacatgtaccaggagatcgggttccagaaggacagccagggggagtacaaggcgtcc
cagtgcatccacatggactgtctcaggtgggtgaagagggacagttaccttcctgtgggc
agccacaacctcaaggcggctgccaaagccaagctgggctatgaccccgtggagctggac
cccgaggacatgtgccgaatggccaccgagcagccccagactctggccacgtactccgtg
tcagacgcggtggccacgtactacctgtacatgaagtacgtccatccctttatattcgcc
ctctgcaccattatccctatggagcccgacgaggtgctgcggaagggctccgggacgctg
tgtgaggccttattgatggtgcaagccttccacgccaacatcatcttccccaacaagcag
gagcaggagttcaacaagctgacggatgacggtcacgtgctagacgcagagacctatgtg
ggtggccacgtggaggccctcgagtctggcgtgtttcgcagtgacatcccctgccggttc
aggatgaatcctgctgcctttgacttcctgctgcagcgggtggagaagaccatgcgtcat
gccatcgaggaagaggaaaaggtgcccatggaggaggtcaccaacttccaagaggtgtgt
gatcagattaagaccaagctcacctccctgaaagatgttccaaacagaatagagtgtccc
cttatctatcacctggacgtgggggccatgtaccccaacatcatcctgacaaaccgcctg
cagccctctgccgtggtggacgaggccacctgcgctgcctgtgacttcaacaagccggga
gcagactgccagcggaagatggcctggcagtggaggggcgagttcatgccagccagccgc
agtgagtaccatcggatccagcaccagctggagtcagagaagttccctcccctgagtgca
gacggtccagcgcgggcctttcacgagctgtcccgcgaggagcaggccaaatatgagaag
cggaggctcgcagattactgccggaaggcgtacaagaagatccacgtgacccgggtggag
gagcgcctcaccaccatctgccagcgggagaactccttctacgtggacacggtgcgtgcc
ttccgagacaggcgctatgagttcaagggtctccacaaggtgtggaaaaagaagctctcc
gcggccatggagctgggcgacgcggccgaggtgaagcgctgcaggaacatggaggtcctg
tacgactctctgcagctggcgcacaagtgcatcctcaactccttctacggctacgtcatg
cgcagaggggctcgctggtactccatggagatggcaggcatcgtctgtttcacgggagcc
aacatcatcacgcaggcgcgggagctgatcgagcagattgggaggcccttggagctggac
acagatggaatatggtgcgtcctgcccaacagcttccctgaaaactttgtcatcaagacg
accagtgtaaaaaagcccaagctgaccatttcctaccctggggccatgttaaacatcatg
gtcaaggaaggcttcaccaatgaccagtaccaggagctgaccgagccgtcctcactcagc
tatgtcacccgctcagagaacagcatcttttttgaggttgacggaccctaccttgccatg
atccttccagcctccaaggaagaaggcaagaaactgaagaagaggtatgcggtcttcaat
gaggacggctccttggctgagctaaagggcttcgagatcaaacgccgaggggagctgcag
ctaattaagatcttccagtcctcggtgttcgaggccttcctcaagggcagcacgctagag
gaagtgtacagctctgtcgccaaggtggccgattactggctggacgtgctgtacagtaag
gcggctaacatgcccgactctgagctgttcgagctgatctcggagaaccgctccatgtct
cggaagctggaagactatggagagcagaagtccacgtccatcagcacagccagacgcctg
gctgagttcctgggagaccagatggtgagggacgcgggcctgagctgccgctacatcatc
tcccggaagcccgagggctctcccgtcacagagagggccatcccgcttgccatcttccag
gcagagcccacggtgaggaagcacttcctccggaagtggctcaagagctcttccctccaa
gacttcgacattcggacgatcctggactgggactactacatcgagcgtctgggcagtgcc
atccagaagatcatcacaatccctgcggctctgcagcaggtgaagaacccagtaccacgc
gtcaagcaccccgactggctgcacaagaaacttctggagaagaacgatgtctgcaagcag
aagaagatcagtgagctcttcgtcctggaaggcaggagacaggtgggcacggcacaggct
ccacaaggcacgcagagccttggtgctcccgatatggaggactttggtctggtgaagcca
ccacactcggcggttcctgttgccactaagaggaagcgtgtcctctgggagagccaggag
gagtcacaggacctggagctgacggtgccctggcaggaaatcttggggcagcccccggcc
ctcggaaccacccaggaagagtggctggtctggctccgcttccacaagaagaagtggcag
ctgcaggcccggcagcgcctggctcgtaagaagaggcggcgtctggaggtggcggagggc
gaacctgtgcccggggccatccgggacaggcccgccactggcttggggatcttcttgcgc
aggaccgcccgcagcatcttggaccttccgtggcagatcgtgcagatcagtgaaaccagc
caggcgggcctgttcaggctgtgggcagtcattggcagcgatttgtactgcatcaggctg
aacatcccccgcgtgttctacgtcaaccagcgggtggctaaagccgaggaggggccttcc
tatcgcaaggtcagccgtgctctcccgcgctccaatgtggtctacaacctctatgagtac
tcggtgcccgaggacatgtaccaggagcacatcaacgagatcaacaccgagctgtcggcc
ccagacattgagggcgtgtatgagactcaggtcccgttactgttccgggccctagtgcag
ctgggctgtgtgtgtgtggtcaataaacagctggtgaggcacctgtcaggctgggaggcc
gaaacctttgctcttgagcacttggagatgcgctctctggcccagttcagctacctggag
ccaggcagcatccgccacctcttcctgtaccaccacgcacagggccacaaagccctcttc
ggcttgttcgtgccctcccagcgcagagcgtctgtgttcgtgttggacaccgtgcgaagc
aaccagatgcccagcctcggcgctctgtactcagccgagcacagcctcatggtagagaaa
gtgggtcccgagctcctgcctccccccaaacacactttcgaagttcgggctgaaaccgac
atgaagaccatctgcagggccatccagcgcttcctgctggcctacaaggaggagcgccgt
gggcccaccctcatcgccgttcagtccaactgggagctgaagaggctggctggtgaggtt
cccgtcctggaggagttcccgctggtgcctgtccacgtggccgataggatcagctacggc
gtcctggactggcagcgccttggggcccggcgcatgatccgccactacctcaacctggac
acctgtctatcgcaggccttcgagatgagcaggtacttccacatccccattggtaatctg
cctgaggacatctctaccttcggctccgacctcttctttgcccgccacctccagcgccac
agccacttgctctggctgtcccctacgtcacgccctgacctgggtggcaaggaggccgac
gacaatcgcctcatcatggagtttgatgaccaggccagcgtggagatcaactgcccaggc
tgctactccacggtgtgcgtggagctggacctgcagaacctggccgtcaacaccatcctg
cagtcccaccacattaacgacatggaaggggctgacagcgtgggcatcagcttcgacgtg
ctgcagcaggcctccctggaggacatgatcactggcaatcaggccgccagcgccctggcc
agctacgacgagaccgcgctctgctccagcaccttcaggatcctgaagagcatggtggtg
ggctgggtgaaggagatcacgcagtaccgcaacgtctacgctgacaaccaggtgatgcac
ttctaccgctggctgcgggccccgtcctcgctgctccacgacccggctctgcaccgcacg
ctccacagcatgatgaagaagctctttctgcagctcatcgcggagttcaagcgcttgggg
tcatctgtcgtctacgccaacttcaaccgcatcatcctctgcacgaagaagcggcgggtt
gaagacgccctggcctacgtggagtacgtcaccaacagcatccattccaaagagctcttc
cattccctgacaatttctttctcccggtcctgggaatttcttctctggatggatccctcc
aactacggtggaatcaaaggcagcgttctgcctcgtattcactgcggacaggacacagct
ggggctggggctgcgtcacagcgggggtccccagaagagggcagagaggaggaggaggag
gaggaagaggaggccgaggcggaagaggaggagggggacagtgcaccagagcctgacgtg
gaggacaagctggaaaacaactggaacatcgtgcagttcctgccgcaggcagcctcgtgc
cagagctacttcctcatgatcgtgtcagcgtacatcgtggcggtgtaccacagcatgaag
gaggagctgcggcgcagcgccccgggaagcacgcccctcagacgccgggggcccagccag
ctgtcccaggacgccccggcggccggcgccctgcccggaatgatcaccttctctcaagac
tacgtggccaacgagctcacgcagagcttcttcagcatcactcagaagattcagaagaag
gtcacgggctcacggaactccgttgagctgtccagcatgttcccgcggctcccgggctcc
cacctgctgctcaacaaccccgcgctcgagttcgtcaagtatgtgtgcaaggtgctgtct
ctggacacgaacatcacaaaccaggtgaacaagctgaaccgagacctgcttcgtctcgtg
gacgtgggcgagttctcggaggaggcccagttccgagacccctgccgctcctacgtgctc
cccgaggtcatctgccgcagctgtaacttctgccgggacctggacctgtgcaaggagtcc
tccttctctcaggacggggctatactgccgcagtggctctgctccaactgtcaggttgcc
tacgacacctccgtcatcgagatggctctggtggaagctctgcagaagaagctgatggcc
ttcactctgcaggacctgatctgctcgaagtgccggggcgtgaaggaggccaacatgcct
gtgtactgcagctgcgcgggggccttcgccctcaccatccgcaccaaggtcttcatggag
cagattggaatcttccagaacattgcccagcattatggcatgtcatacctcatggagacc
ctggagtggttgctacagaagaaccctgagctgggccagtag
DBGET
integrated database retrieval system
