KEGG   Neogale vison (American mink): 122903140
Entry
122903140         CDS       T08764                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
nvs  Neogale vison (American mink)
Pathway
nvs03013  Nucleocytoplasmic transport
nvs04150  mTOR signaling pathway
nvs05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:nvs00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    122903140 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    122903140 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    122903140 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nvs03019]
    122903140 (SEH1L)
   04131 Membrane trafficking [BR:nvs04131]
    122903140 (SEH1L)
Messenger RNA biogenesis [BR:nvs03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     122903140 (SEH1L)
Membrane trafficking [BR:nvs04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    122903140 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd ANAPC4_WD40 WDR55 Beta-prop_EIPR1 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 122903140
NCBI-ProteinID: XP_044099595
LinkDB
Position
3:210442990..210472270
AA seq 421 aa
MFVARHIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGNSQQGNSNPSLGSNIPNLQNSLNGSSSGRYFF
PPLDSPRAGSRWSSYAQLLPPPPPPLVEHSCDADTANLQYPHPRRRSLSRPLNPLPENEG
V
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttgtggcgcgccacatcgcggcggaccataaagatctcatccatgatgtctctttc
gacttccacgggcgacggatggctacctgctccagcgaccagagcgtcaaggtctgggat
aaaagtgaaagtggggattggcattgtactgctagctggaagacacatagtggatctgtg
tggcgtgtgacgtgggcccatcctgaatttggacaggttttggcttcttgttcttttgac
cgaacagctgctgtgtgggaagaaatagtaggagaatcaaatgataaacttcgaggacag
agtcattgggttaagaggacaactctagtggatagcagaacatctgttaccgatgtgaaa
tttgctcctaaacatatgggccttatgttagcaacctgttcggcagatggtatagtaaga
atatatgaggctccagatgttatgaatctcagccagtggtctctgcagcacgagatttca
tgtaagctaagctgtagttgtatttcttggaatccttcaagctctcgtgctcattccccc
atgatagctgtaggaagtgatgacagtagtccaaacgcaatggccaaggttcagattttc
gagtataatgaaaataccaggaaatatgcaaaagctgaaaccctcatgacagtcacagat
cctgtgcatgacattgcctttgctccaaacttgggaaggtctttccatattctagccata
gcaaccaaagatgtgaggatttttacattaaagcctgtgaggaaagaacttacttcctct
ggtggaccaacaaaatttgaaatccatatagtggctcagtttgataatcataattcccag
gtctggcgagtgagttggaatataacaggaacagtgctagcatcttcaggagatgatggc
tgtgtgagattgtggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaatgggagccctgtcaatgggaattctcagcagggaaactcaaatccttccctaggt
tcaaatatcccaaatcttcaaaattcattaaatggatcttcttctggcaggtatttcttt
ccccctctggattccccacgggctggatcgagatggtccagttatgcccagctccttcct
cctcctcctcctcctctggtagagcactcttgcgatgctgacactgccaacctccagtat
cctcaccctcgcagacgatctctctctcggcctcttaatcccttacctgagaatgaaggg
gtttaa

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