Neogale vison (American mink): 122903234
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Entry
122903234 CDS
T08764
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122903234 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122903234 (DEPDC5)
Membrane trafficking [BR:
nvs04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
122903234 (DEPDC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
122903234
NCBI-ProteinID:
XP_044099774
LinkDB
All DBs
Position
3:complement(217127273..217261156)
Genome browser
AA seq
1602 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVMNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSLDEFPEINRA
SIRQDHKGRYYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSCLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKNGRDTSLGTPKEPENALPIQVDYDAYDAQVFRLPGPSRAQRLAT
CRSVRERESHHRKSASSCDVSSSPSLPSRALPTEEVRSQASDDSSLGRSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMEELQGSGQRDPTHSSAELLE
LAYHEAAGRHSTSRQPGDSMSFLNFSGTEELSVSLLSSSGAGMNPRTQNKDSLEDSVSTS
PDPILTLSAPPVVPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPE
ADIDRRDEEGVQMTAQQVFEEFICQRLMQGYQIIVQPKAPKPNPTVPPPLSSSPLYSRGL
VSRSRPEEEDQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSE
FVSCWVEFSHERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRIT
EGEAHCDIYGDRPRADEEEWQLLDGFIRFVEGLNRIRRRHRSDRMMRKGTAMKGLQMTGP
IATHSLESAGPPVGKKGTSALSALLEMEASQKCLGEQQAAVHGAKSSSQPAESSNVAMTP
TYVDSPRKDGAFFMEFVRSPRTASSAFYPQVSVDQTATPVQDSTSLGVSTSQSVDRGNSQ
AFGNSQNSGEQSFPPANSSDSSSQQLAASSLTSSSTLTEILEAMKHPSTGVQLLSEQKGL
SPCCFISAEVVHWLVNNVEGVQTQAMAIDIMQKMLEEQLITHASGEVWRTFIYGFYFYKI
VMDKEPDRVAMQQPTTWHTTAVEDFASFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPA
SYASRHSSFSRSFGGRSQAAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLN
AAFEIKLHWMAVTAAVLFEMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFI
PLNTSCLLKEGSEHLFDSFEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPAENKPQ
YIHVTGTVFLQLPYSRRKFSGQQRRRRNSTSSTNQNMFCEERVGYNWAYNTMLTKTWRSS
ATGDEKFADRLLRDFTDFCVNRDNRLVMFWTSCLEKMHASAP
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaactaaggtctacaaacttgtcatccacaagaagggctttgggggcagtgat
gatgagctagtcatgaaccctaaagtgtttcctcacatcaagcttggagacattgtggag
attgctcaccccaatgatgaatacagccctctgcttttgcaagtcaagtcacttaaggaa
gatttgcagaaagaaactattagtgtggaccagactgtgactcaagtgttccgattaaga
ccttatcaagatgtttatgtgaatgttgtagaccctaaggatgtgacccttgacctagtg
gaattaacctttaaggatcagtatataggccgtggagatatgtggcgactaaagaaaagt
ttggtcagcacatgtgcctatatcactcagaaggtggaatttgctggcatcagggcacag
gctggtgagctgtgggtcaagaatgagaaggtcatgtgtggttatatcagcgaagatact
agggtggtgtttcgttctacgtcggctatggtttacatatttattcagatgagctgtgaa
atgtgggatttcgatatttatggggatctatattttgagaaagctgtgaatggtttcctt
gctgatctctttaccaagtggaaggagaaaaactgtagtcatgaagtgacagtggtccta
ttttctagaactttctatgatgcaaaatctcttgatgaatttcctgaaataaaccgagcc
tcaattcgacaggatcacaagggacggtactatgaagacttttataaagtggtggtgcag
aatgagaggagagaagagtggacttcactcctcgtgaccattaaaaaactcttcatccag
tatccagtgttggtgcgactggaacaggcagagggttttcctcaaggagacaattctacc
tcagcacaaggaaactacctagaggccatcaatctgtcattcaatgtgtttgacaagcac
tacatcaaccgcaactttgaccgaactgggcaaatgtctgtggtgatcacgcctggggtg
ggtgtgtttgaagtggaccgtctactcatgatcttgaccaagcagcggatgatagataat
ggaattggtgtggacttggtatgcatgggggagcaaccattacatgctgtcccgttgttc
aagctacataatcgaagtgcgcctcgtgattcttgtctgggcgatgactataatattcct
cactggataaaccacagtttctatacatcgaaaagccagctcttttgtaacagtttcacc
ccacgaataaaactggcaggaaagaagcctgcctctgagaaagcaaaaaatggccgtgat
acatctcttgggacaccaaaagaacctgagaatgcccttcccatccaagtagattatgat
gcttacgacgcccaagtcttcaggctaccaggcccatcccgggctcagcgcctcgccacc
tgcaggtctgtgcgagagcgggagagtcaccatcggaagagtgccagctcctgcgacgtc
tcatccagtccttccttgcccagccgcgcactgcccactgaggaagtgaggagccaggct
tctgatgacagctccctgggcaggagtgccaacatcctgatgatcccacacccccacctg
caccagtatgaagtcagcagctccttgggctataccagcactcgagatgtcctggagaac
atgatggagccaccacagcgagactcaagtgcaccagggaggttccacgtaggcagtgcg
gaatccatgctgcatgttcgacccgggggatacacaccccagcgggcactcattaacccc
tttgccccctcacgaatgcccatgaagctcacctccaacagaaggcgctggatgcacact
tttcctgtgggaccatccggagaggccatccagatccatcaccagacccggcagaatatg
gaggagctgcagggcagcgggcagagggacccaactcactcctctgcagagctgctggag
ttagcgtatcatgaagcagctggaaggcacagcacttcccgtcagcctggtgacagcatg
tccttcttgaacttcagtggaacagaagagctttctgtcagcctgcttagcagcagtggt
gcaggtatgaatcctaggactcagaataaggattccctagaggacagtgtttctacctct
ccagacccaattctgacactgtctgctccccctgtagtgccaggcttctgttgcacagtt
ggagtggactggaaatctctcactactccggcgtgcctccccctcaccaccgactacttc
cccgaccgccagggcctgcagaacgactacacggagggctgttacgatctccttccagaa
gcagacatcgacaggagggacgaggagggtgtgcagatgacggcccagcaggtgtttgaa
gagttcatctgccagcgtctcatgcagggctaccaaatcatagtgcagcccaaggcaccg
aagcccaaccccactgtcccacccccactgagcagcagcccgctctatagccgaggcctt
gtgtcccgaagccgacctgaggaggaggatcagtattggctgagtatgggcagaacattc
cacaaagtgacgctgaaggataagatgatcacagtgacacgttaccttcccaagtaccct
tatgaatctgcccagatccactatacctacagcctctgcccttcccactcggactcagag
tttgtctcttgttgggtggaattctcccatgagcggctagaggagtacaagtggaattac
ttagatcagtatatctgttctgccggctctgaggacttcagcttaattgagtctctgaag
ttctggaggacccgtttcctgctgctaccagcctgtgtcactgccacaaagcgcatcaca
gaaggggaagcccactgcgacatctatggggacaggccccgggcagatgaggaggaatgg
cagctcttggatgggtttatccgcttcgtggagggtttgaaccgaatccgcaggagacat
cgctcagatcgcatgatgcggaaagggaccgccatgaaaggtttacagatgaccgggccc
attgccacacactcccttgagtcggccggcccccctgttgggaagaagggaacctcagct
ctgtccgccttgttggagatggaggccagtcagaagtgtctaggagaacagcaggcagct
gtgcatggtgccaagagctcctcccagccagctgagagcagcaacgttgccatgactccc
acctacgtggacagcccacgaaaggacggggccttctttatggagtttgtccgcagcccg
cgcacagcatcgtctgccttctacccacaggtgtctgtggaccagacagctaccccagta
caggacagcaccagtttgggggtaagcacaagccagtctgtggacagaggcaacagccag
gcctttgggaactcccagaactcaggggaacagagcttcccccctgcaaactccagtgac
agcagctctcagcagctggcagcaagctccttaacttcatcctccaccctgacggagatc
ctggaagccatgaaacacccctcgacgggagtccagctgctctcagaacagaagggcctc
tcaccgtgctgcttcatcagtgcagaggtggtgcactggctggtgaacaacgtggagggt
gtccagacacaggcgatggcgattgatatcatgcagaaaatgctggaagagcaactcatc
acacatgcatctggtgaagtctggcggaccttcatctatggcttctatttctacaagata
gtcatggacaaagaacctgaccgagtggccatgcagcaacccaccacctggcacacaacg
gcagtggaggactttgccagcttccagcgcaagtggtttgaggtggcctttgtggccgaa
gagctcttgcactccgagattccggctttcctcttgccctggctgcctagccggccagcc
tcctatgcaagcaggcacagctccttcagccgcagctttggagggcgaagccaggcagct
gcgcttttagctgccactgtcccagagcagaggactgtgaccctggacgtggacgtgaac
aaccgcacagaccggctggagtggtgcagctgttactatcatggcaacttctccctgaat
gcggcctttgagatcaagctccactggatggctgtgactgccgcggtcctcttcgagatg
gtccagggttggcatcgcaaagccacttcctgcggctttttgttggtccctgttctggag
ggtccctttgcgctgcccagttacctgtatggcgatccgcttcgagcacagctcttcatt
ccactcaacaccagctgcctgctcaaggagggcagtgagcacttgtttgatagctttgaa
ccggaaacatactgggatcgaatgcaccttttccaggaagccattgcacacaggtttggg
tttgtgcaagataaatattccgcttctgcttttaacttccccgctgagaacaagcctcaa
tacatccatgttacaggaacagtgttcctgcagctgccctactccaggcgcaagttctca
ggacaacagcggcggcggcggaactccaccagctccaccaaccagaacatgttctgtgag
gaacgggtcggctacaactgggcctataataccatgctgaccaaaacatggcgctctagt
gccacaggggacgagaagtttgctgatcggctgctcagggatttcacggacttctgcgtc
aaccgcgacaaccggctggttatgttctggacgagctgcctggagaagatgcatgccagt
gccccgtga
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integrated database retrieval system
