Neogale vison (American mink): 122903381
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Entry
122903381 CDS
T08764
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03030
DNA replication
nvs03410
Base excision repair
nvs03420
Nucleotide excision repair
nvs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122903381 (RFC5)
03410 Base excision repair
122903381 (RFC5)
03420 Nucleotide excision repair
122903381 (RFC5)
03430 Mismatch repair
122903381 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvs03032
]
122903381 (RFC5)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122903381 (RFC5)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122903381 (RFC5)
DNA replication proteins [BR:
nvs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122903381 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
122903381 (RFC5)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122903381 (RFC5)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122903381 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
122903381 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_16
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_14
DEAD
DUF815
ResIII
AAA_5
AAA_19
ATPase_2
AAA_30
PhoH
TIP49
AAA_7
TniB
nSTAND3
DNAX_ATPase_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
NPHP3_N
AAA_25
AAA_3
ABC_tran
AAA_28
Motif
Other DBs
NCBI-GeneID:
122903381
NCBI-ProteinID:
XP_044100120
UniProt:
A0A8C7ERB0
LinkDB
All DBs
Position
3:complement(227979751..227990784)
Genome browser
AA seq
340 aa
AA seq
DB search
METSAQQEQQQPMAAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVIEEEKVDLSEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNIMELKTLKGLALHDILTEIHLFVHRVDFPSSVRVH
LLAKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagacctcagcgcagcaggagcagcagcagccgatggcggccaagatcagaaacctg
ccctgggttgaaaaataccggccacagacactgaacgatctgatttctcatcaggacatt
ttgagtaccattcagaaatttattagtgaagaccgcctgccgcacctgcttctatatggt
cctccggggacgggaaagacctccaccatcctggcctgtgcaaaacagctgtacaaagat
aaggaatttggctccatggtcttggagctgaatgcttcagatgaccgaggaatagatatc
gttcggggacccatcctgagctttgctagcacgaggacaatatttaagaaaggcttcaaa
ctagtgatcctggatgaagcggacgccatgactcaggatgcccagaacgccttgaggaga
gtgattgagaaattcacggaaaataccagattctgcctcatctgtaactacctgtcaaag
atcatccccgccctgcagtcccggtgtacaaggttccgattcggcccgctgactcctgaa
ctcatggtcccccggctggaacacgtcatagaagaagagaaagtggacctgagtgaggac
gggatgaaagcactcgtgaccctttccagcggagacatgcgaagggctcttaacattctg
cagagcaccaacatggccttcgggaaggtgacggaggagacggtctacacgtgcaccggg
caccccctcaagtccgacattgccaacattctggactggatgttgaatcaagacttcacc
acggcctacagaaatataatggagttgaagacgctgaaggggttggcgctccatgacatc
ctgactgagatccacctattcgtgcacagagttgactttccatcttcagttcgagtacat
ttattggccaaaatggcagacatagagtacagactctctgttggcaccaacgagaagatt
cagctgagttccctcattgccgctttccaggtcaccagggacctgattgtcacagaggcc
tga
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