Neogale vison (American mink): 122903405
Help
Entry
122903405 CDS
T08764
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvs03009
]
122903405 (DDX54)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122903405 (DDX54)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
Pre-60S particles
Helicases
122903405 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
DNA_pol3_chi
Cob_adeno_trans
Motif
Other DBs
NCBI-GeneID:
122903405
NCBI-ProteinID:
XP_044100164
LinkDB
All DBs
Position
3:231778216..231796345
Genome browser
AA seq
878 aa
AA seq
DB search
MAAGKLPAAGPRSRTAMAQWRKKKGLRKRRGAASQARSSDSEDGEFEIQAEDDARTQKLA
PGRPLPTFPTSECASDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLKTRSAQTGARALVLSPTRELAL
QTMKFTKELGKFTGLRTALILGGDKMEDQFAALHENPDIIIATPGRLVHVAVEMNLKLQS
IEYVVFDEADRLFEMGFAEQLQEIIGRLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDTKLNEQLKTSFFLVREDTKAAVLLHLLRTVVRPQDQTVVFVATKHHAEYLSELLTT
QGVSCAHIYSALDPTARKINLAKFTHGKCSTLIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTPARPHEGSSGAGSVDGVL
GRVPQSVVDDEESSLQGTLSASLELRGLARVADNAQQQYVRSRPAASPESIKRAKELDLA
ELGLHPLFSSRFEERELQRLKLVDSIKNYRSRATIFEINASSRDPSSQVMRAKRQKDRKA
IASFQQGRQGRQEDTAGPAPSCPASQEEKPEEEEEEAAGESVEDVFTEVMGRKRPQPGPD
RGAKRRREEFRLRDQEFYIPYRPKDFDSERGLSIGGDGGAFEQQVAGAVLDLMGDEAQNL
TRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSE
DEGTSQQRGPERRGGKRGRGQGASQPHSPGAPAGRVRSELKTKQQILKQRRRAEKLRFLQ
RGGLKQLSARNRRRAQELQRGAFGRGTHTKKGKMRKRM
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcaagctcccggcggccggacctcggtcccgcactgctatggcccagtgg
aggaaaaagaagggcctgcggaagcgccgaggcgcggcctcccaagcccgcagcagcgat
tcggaggacggcgagtttgagatccaggcggaagatgatgcccggacccagaagctggca
cctggcagacccctgcccaccttccccacctcggaatgtgcctcagacgtggagccagac
actcgggagatggtacgcgcccagaacaagaagaagaagaagtccggaggcttccagtcc
atgggcttgagctacccggtgttcaagggcatcatgaagaagggctacaaagtgccaaca
cccatccagaggaagaccatccccgtgatcctagacggcaaggacgtggtcgccatggcc
cggactggcagtggcaagacggcctgcttcctcatccccatgttcgagcggctcaagacc
cgcagcgcccagacgggggcccgtgcccttgtcctctcgcccacccgcgagctggccctg
cagaccatgaagttcaccaaagagctcggcaagttcacaggcctcaggaccgccctgatc
ctgggcggggacaagatggaagaccagtttgctgccctgcacgaaaatcccgacataatc
attgctaccccagggcgcttggtacacgtggctgtggagatgaacttgaagctgcagagc
atagagtatgtggtgttcgatgaggcagacaggctttttgagatgggctttgccgaacag
ctgcaggaaatcattggccgcctccctgggggccaccagactgttctgttctctgccacg
ctgcccaaactgctggtggagttcgcccgggcgggcctcacggagcctgtgctcatccgg
ctcgatgtggacaccaaactcaatgagcagcttaagacctccttctttcttgtgcgtgag
gacaccaaggctgccgtgctgctccacctgctgcgcaccgtggtgcggccccaggaccag
acggtggtgtttgtggccacgaagcaccacgccgagtacctcagtgagctgctgacaaca
cagggggtgagctgcgcccacatctatagtgccctggacccgacggcccgcaagatcaac
ctggccaagttcacccacggcaagtgctccaccctcatcgtgacggacctggcggcccgc
ggcctggacatcccgctgctggacaacgtcatcaactacagcttccctgccaagggcaag
ctcttcctgcaccgtgtgggccgcgtggcccgggctggccgaagcggcacggcctactcc
ttggtagccccggacgaggtcccctatctgctggacctgcacctgttcctcggccgcgcc
cttacccctgcccgcccccatgaggggtcctcaggtgcgggtagcgtggacggcgtgctg
ggccgggtgccacagagcgtggtagacgacgaggagagcagcctgcagggcaccctgtcg
gcgtcgctggagctgcggggcctggcccgggtggccgacaacgcccagcagcagtacgtg
cgctcccggcccgcggcctcgcccgaatccatcaagagggcgaaggagctggacctcgcg
gagctgggcctgcaccccctcttcagctcgcgcttcgaggagagggagctgcagcggctg
aagctggtggacagcatcaagaactaccgctcacgggcaaccatctttgagatcaacgcc
tccagccgggacccgagcagccaggtgatgcgtgccaagcggcaaaaggaccgcaaggcc
attgccagcttccagcaggggcggcaggggcggcaggaggacacagctggcccagccccc
agctgcccggcatcccaggaagagaagcccgaggaagaggaggaagaggcagcaggagag
agtgtggaggatgtcttcacggaggtcatgggacggaagcggccacagccgggacctgac
cggggagccaagaggcggagggaggagttccggcttcgggaccaggagttctacatcccc
taccggcccaaggacttcgatagtgagcggggcctgagcattggtggggatgggggcgca
ttcgagcagcaggtggctggagctgtcctggacctgatgggggacgaagcccagaacctg
accagaggccggcagcagctgaagtgggaccggaagaagaagcgctttgtgggacagtca
ggacaggaggacaagaaaaagatcaagacagagagcggccgctacatcagcagctcctat
aaacgggacctctaccagaagtggaaacagaaacaaaaaatcgatgatcgggactcagaa
gacgaaggaacgtcccagcagcgaggcccagagcgaagaggtgggaagcgtggaagaggc
caaggtgcatcccagccccacagcccgggtgctcccgcaggccgagtgcgctcagagctc
aagaccaagcaacagatcctgaagcagcggcgccgggcggagaagttgcgcttcctgcag
cgagggggtctgaagcagctgtccgcccgcaaccggcgccgagcccaggagctgcagagg
ggcgcctttggccggggtacccacaccaagaagggcaagatgaggaagaggatgtaa
DBGET
integrated database retrieval system
