Neogale vison (American mink): 122903589
Help
Entry
122903589 CDS
T08764
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1
KO
K12385
Niemann-Pick C1 protein
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
nvs04142
Lysosome
nvs04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
122903589 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122903589 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
122903589 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nvs02000
]
122903589 (NPC1)
Transporters [BR:
nvs02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
122903589 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Folate_rec
Motif
Other DBs
NCBI-GeneID:
122903589
NCBI-ProteinID:
XP_044100330
LinkDB
All DBs
Position
3:170914710..170964018
Genome browser
AA seq
1519 aa
AA seq
DB search
MGGGQLGWGSPPTDWSKATLRAAPPEGGAVPALLQASPARSPSGDWLAREHRPPPRSAPR
APSGIGIGKTISKRSHLLKTLSPTVPRPGKTKRGKRVKTSKPHTFGTTPAISSQPDSRSS
AVPVWDPYRKSHPQNRRAAKRRVDPAEEAPPKGRCPVRPRPRPSPPSPGRPRPRTGPGRP
VGGTAQKGEEPTTPSSFLLYARSQPPASAPSLGWHGIMRQPCAPSRGEPSRVPPLSAARH
RGSMTARGPALGLLLLLLCPAQVLAQSCVWYGECGIASGDKRYNCQYSGPPKPLPKDGYD
LMQELCPGFFFDNVSVCCDVQQLRTLKDSLQLPLQFLSRCPSCFYNLMNLFCELTCSPQQ
SQFLNVTETEDYVDPVTNQTKTNVKELQYYVGESFANAMYNACRDVEAPSSNDKALGLLC
GKDAGACNATNWIEYMFNKDNGQAPFTITPIFSDLPAHGMEPMNNATKSCDESVDEVTGP
CSCQDCSAVCGPRPQPPPPPAPWRILGLDAMYVIMWTTYMAFLLVFFGAVFAVWCYRKRY
FVSEYTPIDSNIAFSVNASDKGEASCCDALGAAFEGWLRRLFSHWGSFCVRNPGCIVVFS
LAFIAACSSGLVFVRVTTNPVDLWSAPGSRARLEKEYFDTHFGPFFRTEQLIIQAPHTSA
HTYQPYPSGSDVPFGPPLDRGILHQVLDLQTAIENITAFYNNETVTLQDICVAPLSPYNK
NCTIMSVLNYFQNSHSMLDHEVGDDFYVYADYHTHLLYCVRAPASLNDTSLLHDPCLGTF
GGPVFPWLVLGGYDDQNYNNATALVITFPVNNYYNDTEKLQRAQAWEKEFINFVKNYENP
NLTISFTTERSIEDELNRESNGDVFTVLISYAVMFLYISIALGHIKSWSRFLVDSKISLG
IAGILIVLSSVACSLGIFSYVGIPLTLIVIEVIPFLVLAVGVDNIFILVQTYQRDERLQG
ETLDQQLGRVLGEVAPSMFLSSFSEAVAFFLGALSKMPAVHTFSLFAGMAVLIDFLLQIT
CFVSLLGLDIKRQEKHRLDVLCCVRGSEDGTSVQASESCLFRFFKNSYSPLLLKDWMRPI
VIAVFVGVLSFSIAVLNKVEIGLDQSLSMPDDSYVLGYFRSLRYLHAGPPVYFVLEEGHD
YSSLKGQNMVCGGMGCNNDSLVQQIFTAAQLDNYTRIGFAPSSWIDDYFDWVKPQSSCCR
VYNGTDRFCNASVVDPACGRCRPLTPEGKQRPQGEDFMRFLPMFLSDNPNPKCGKGGHAA
YSSAVNILGNDTAVGATYFMTYHTVLQTSADFTDAMRKAILIAGNITKTMGLEGSGYRVF
PYSVFYVFYEQYLTIIDDTIFNLSVSLGAIFLVTLVLLGCELWSAVIMCVTIAMILVNMF
GVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRVERAEEALSHMGSSVF
SGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLIFLPVLLSYIGPSINKAK
SLATQERYKGTEREQLLNF
NT seq
4560 nt
NT seq
+upstream
nt +downstream
nt
atgggggggggtcagttggggtgggggtctcctcccaccgactggtccaaagcgacgcta
cgcgcagctccgccagagggtggcgcagttccagcacttttgcaagcgtcgcccgcgagg
tcacccagcggagattggttggctcgggagcaccgcccaccgccacgctccgcccctcgc
gctccgagtgggatcggaattgggaaaacaatctccaagcgctcccatttgctaaaaacc
ctctcgcccaccgtccctcgtccgggaaagacaaaaaggggaaaaagagttaaaacatca
aagccacacactttcggcacaactccagcaatatcctcccagccggactccagaagttcg
gctgtcccagtctgggatccctaccgtaagtcgcacccccaaaaccgcagggccgcaaaa
cgcagagttgaccctgcagaggaagccccgccaaaggggcgctgcccagtcaggccccgc
ccccgcccctccccgccttccccgggtcggccccgccccagaacgggtcccgggcgtccc
gtcggcggcaccgcccagaaaggggaggagccgacgacgccttcctctttcctgctctac
gctcgtagtcagccgccagcgtctgctccctccctaggctggcacggcatcatgaggcag
ccctgcgcgccgagccggggcgagcccagccgagtaccgccgctgtccgcagcccggcac
cgcggcagcatgaccgcgcgcggcccagcgctcggcctcctcctgctgctgctctgtccc
gcgcaggtgttggcacagtcctgtgtgtggtatggagagtgtggaattgcatctggagac
aagagatacaactgccaatattcggggccaccaaaacccttgccgaaggacgggtatgac
ttaatgcaggagctctgcccgggcttcttctttgacaacgtcagcgtgtgctgcgacgtg
cagcagctgcggaccctgaaggatagcttgcagctgcccctgcagtttctgtccagatgt
ccatcctgtttttataacctaatgaacctgttttgcgagctgacgtgtagcccccagcaa
agtcagtttctgaatgttacagaaactgaagattatgttgatcctgttacaaaccagacg
aaaacaaacgtaaaagaattacagtactatgttggagagagttttgccaatgccatgtac
aacgcctgccgggacgtggaggccccctccagtaatgacaaagccctggggctcctgtgt
gggaaggacgccggggcctgcaacgccaccaactggatcgagtacatgttcaataaggac
aacggccaggcgccttttaccatcacgcccattttctcagatcttccggcccatgggatg
gagcccatgaacaacgccaccaagagctgtgacgagtctgtggacgaggtcacagggccg
tgcagctgccaagactgctcggccgtgtgtggccccaggccccagccgccaccccctccg
gctccctggagaatcttgggcctggacgccatgtacgtcatcatgtggaccacctacatg
gcattcttgcttgtcttctttggagcagtatttgccgtgtggtgctacagaaaacgctat
tttgtctccgagtacacccccattgacagcaatattgctttctccgtaaatgccagtgac
aaaggggaggcgtcctgctgtgatgcgcttggggcggcattcgagggctggctgaggcgg
ctcttctcccactggggctccttctgcgtacgaaacccaggctgcatcgtcgtcttctcc
ctggcctttatcgccgcctgctcgtcaggcctggtgttcgtccgggtcacgaccaacccg
gtggacctgtggtcggcccccggcagccgggcgcgcctggagaaagagtactttgacacg
cattttgggcccttcttccgcacggagcagctcatcatccaggccccccacaccagcgcg
cacacgtaccagccgtacccctctggctccgatgtgccctttggacccccgctcgacaga
gggatcttgcaccaggttcttgacttacaaaccgccattgaaaacatcactgccttttac
aacaacgagacagtgacacttcaggacatctgcgtagccccgctttcaccctataacaag
aactgcaccatcatgagcgtgttgaattacttccagaacagccattccatgctggaccac
gaagtaggcgatgacttctacgtgtacgcagattaccacacgcacttgctgtactgcgta
cgggctcctgcctctctgaatgataccagtttgctccatgacccttgcctgggtacgttt
ggtgggccagtgttcccgtggcttgtgttaggaggctatgatgatcaaaactacaataac
gctacagcccttgtgattacctttcctgtcaataattactacaatgatacagagaagctc
cagagggcccaggcctgggagaaagagtttattaattttgtgaaaaactacgagaatccg
aatctgaccatttctttcacgactgagcgaagcatcgaggatgaactgaatcgtgagagt
aacggcgatgtctttactgtcctgatcagctatgccgtcatgtttctgtacatttccata
gccttgggccacatcaaaagctggagcaggtttctagtggattctaaaatctcccttggc
atcgctgggatcctcatcgtgttgagctcagtggcgtgctcactgggcatcttcagctac
gttgggatccccctcaccctcattgtgatcgaagtcatcccattcctggtgctggctgtc
ggggtggacaacatcttcattctggtccagacctaccagcgagatgaacgtcttcaagga
gaaactctggatcagcagctgggcagggtcctaggagaagtggctcctagtatgttcctg
tcctccttttcagaggctgtagcgtttttcttaggggcgctgtcaaagatgccggccgtt
cacactttctccctgttcgccgggatggccgtcctcattgacttccttcttcagattaca
tgttttgtgagtctcttggggttagacatcaagcgtcaagagaaacatcgtctggatgtc
ctttgctgtgtcagaggctcggaagatggaactagcgtccaggcctcagaaagctgcttg
tttcggttcttcaaaaactcctattctccacttctgcttaaggattggatgcgacctatt
gtgatagcggtatttgtgggtgtcctgtcctttagtatcgcggtgctgaataaagtggaa
attggattggatcagtctctctccatgcccgatgactcctacgtgctgggttacttcagg
tcgctcagatacctgcatgcgggcccacctgtgtacttcgtcctggaggaagggcacgac
tacagctccctgaaagggcagaacatggtgtgcgggggcatgggctgcaacaacgactcc
ctggtgcagcagatcttcaccgcggctcagctggacaactatacccgaataggctttgcc
ccctcgtcctggatcgatgattattttgattgggtcaagcctcagtcttcttgctgtaga
gtctacaacggcacggatcgcttctgcaatgcctcagtggttgaccctgcctgtggccgc
tgcagacctctaaccccagagggcaaacagaggcctcaaggggaagacttcatgagattc
ctgcccatgttcctttctgataacccgaaccccaagtgcggcaaagggggacatgctgct
tacagttcagccgttaacatcctcggcaatgacacggctgtcggtgccacttacttcatg
acctaccacactgtgcttcagacctctgctgactttactgatgccatgagaaaagccatc
cttatcgccggcaacatcaccaaaaccatgggcctcgaaggaagcggttaccgtgtgttc
ccgtacagtgtgttctatgtcttctatgaacagtacctgaccattatcgatgacacgatc
tttaacctcagcgtgtccctgggagccatcttcttggtgaccctggttctcctgggctgt
gaactgtggtctgcagtgatcatgtgtgtcaccatcgccatgatcttggtcaacatgttt
ggcgtcatgtggctctggggcatcagtctgaatgcagtttccttggtcaatttggttatg
agctgtggcatttccgtggagttctgcagccacatcacgagagcgttcacagtgagcacg
aagggcagccgcgtggaacgggccgaggaggcgctctctcacatgggcagttccgtgttc
agtggaatcacactaacaaaatttggagggattgtggtgctggcgtttgccaagtctcag
atcttccagatattctacttcaggatgtatctggctatggtcttactgggagccacccat
ggcttgatattcctccctgtcttactcagctacataggcccatccataaataaagccaaa
agtttggccactcaagagcgatacaaaggtacagagcgagaacagctcctgaatttctag
DBGET
integrated database retrieval system
