Neogale vison (American mink): 122903939
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Entry
122903939 CDS
T08764
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04750
Inflammatory mediator regulation of TRP channels
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
122903939 (TRPA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvs04040
]
122903939 (TRPA1)
Ion channels [BR:
nvs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122903939 (TRPA1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
DUF7694
Motif
Other DBs
NCBI-GeneID:
122903939
NCBI-ProteinID:
XP_044100400
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Position
4:61278459..61342798
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AA seq
1120 aa
AA seq
DB search
MRRSLRKMLSPGKQEEPQGAVYQGVENDMDDSKDSLKVVFEGSTCRLKNLLKKRKKLSKY
DDMNASPLHHAAAEGHVELMEMIINDSSFEVLNVMDDYGNTPLHWAAEKNQVESVKFLLS
KGANPNLRNSSMMAPLHIAVQSLHNEVMKVLTEHSSTDINLEGENGNTAVIIACSKDNSE
ALQILLNKGAQPCKSNKWGCFPIHQAAFSGAKKCMEIILKFGEEHGYSRQSHINFVNNGK
SSPLHMAVQSGDLEMIKMCLDNGAQLELMENGKCTPLHFAATQGATEIVKLMISSYSGSS
DIVNAVDGNHETLLHRASLFDHHELADYLISVGADINSTDSEGRSPLILATASASWNIVN
LLLSKGARVDIKDHLGRNFLHLTVQQPHGLKNLQPEFMQMQHIKQLVMDEDDDGCTPLHY
ACRHGIPVSVNNLLDFNVSIHSKSKDKKSPLHFAASYGRIKTCQRLLQDMSDTRLLNEGD
LHGMTPLHLAAKNGHDKVVQLLLKKGALFLSDHNGWTALHHASLGGYTQTMKVILDTNLK
CTDQLDEEGNTALHFAAREGHAKAVALLLSYDADIVLNKQQASFLHVAIHNKRKEVVLTT
IKNKRWEECLKVFSHYSPSNKCPVMEMVEYLPECMKVLLDCCIIPSTGDKSCKDYHIEYN
FTYLQCPLEFTKKVTPAQDVTYEPLTTLNVMVQHNRIELLNHPVCKEYLLMKWLAYGFRA
HVMNLGSYCIGLLPMTFLVTSIKPGMAFNSTGIINETHDHSEILDTKNSYFIKVCMILVF
LSSIFGYCKEVVQIFQQKRNYILDNANAVEWIIYTTSIIFVSPLFVGIPASVQWQCGAIA
IYFYWMNFLLYLQRFENCGIFIVMLEVIVKTLLRSTVVFVFLLLAFGLSFYVLLSLQDAF
SSPLLSIIQTFSMMLGDINYRDAFLEPFLRNELAYPVLSFIQIIAFTMFVPIVLMNLLIG
LAVGDIAEVQKHALLKRIAMQVELHTSLEKKLPLWFLRRVDQKSVVVYPNRPRCSGLLRI
FQFLFHTKETRQEIPNVDTSLEIEILKQKYRLKDLTSLLEKQHELIKLIIQKMEIISETE
DEDNHSSFQDRFKKERLEQRNSKWNSVLKAVKTKTHSPLP
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcagcctgaggaagatgctgagccctgggaagcaggaggagccccagggcgca
gtctaccagggtgtggagaacgacatggacgactccaaggactcgcttaaggtggttttt
gaaggaagtacatgtagacttaaaaaccttctgaagaaacgaaagaaattaagcaaatat
gatgatatgaatgcatcccctttgcaccatgctgcagcagaaggtcatgtggagctgatg
gagatgatcatcaatgactcctcttttgaagtgctgaacgtcatggatgattatggaaat
acccctctgcactgggctgcagaaaaaaaccaggttgaaagtgtgaagtttcttcttagt
aaaggagctaacccaaacctccggaacagcagcatgatggcgccccttcacatagctgtg
cagagcttgcacaacgaggtgatgaaggtcttgactgagcacagcagtacagatattaat
ttggaaggagaaaatggaaacacagctgtgataattgcatgttccaaagacaacagtgaa
gcactgcaaatcttgttaaataaaggagctcagccatgtaaatcaaataaatggggatgt
ttccctattcaccaggctgcgttctcaggtgccaaaaaatgcatggaaataatattaaag
tttggtgaagaacatggatatagtagacagtctcacattaattttgtgaataatgggaaa
tctagccccctgcacatggctgttcaaagtggtgacttggagatgattaaaatgtgcttg
gacaacggtgcacagttggaactgatggaaaatgggaagtgcacaccccttcattttgct
gccacccagggagccactgagattgttaagctgatgatatcctcttattctggtagcagc
gatatcgtcaacgcagtggatggaaatcatgagacactccttcacagagcctcactattt
gatcaccatgaactggcagactacttaatttcagtgggagcagatattaatagcaccgat
tcggaaggacgttctccacttatattagcaactgcctctgcatcttggaatattgtaaat
ttgctactctctaaaggtgcccgtgtagacataaaagatcatcttggacgtaattttttg
catttgacggtacagcagcctcatggattaaaaaatctgcaacctgagtttatgcagatg
cagcatattaaacaactggtaatggatgaagatgatgacgggtgtacccctctacattat
gcgtgtagacatgggattcctgtctctgtaaataacctacttgactttaatgtgtccatt
cattccaaaagtaaagataagaaatcacccttacattttgcagccagttatgggcgaatc
aaaacttgtcagaggcttctgcaagacatgagtgacacgaggcttttgaatgaaggtgac
cttcatggaatgacacctctgcacctagccgcaaaaaatgggcatgataaagtagttcaa
cttcttctgaaaaaaggtgcattatttctcagtgaccacaatggctggactgctttgcat
catgcttccttaggcgggtacactcagaccatgaaggtcattcttgacactaacttgaag
tgcacagatcagctagatgaagaagggaacactgcgcttcactttgctgcaagggaaggc
catgccaaagccgttgcacttcttctgagctacgatgctgacatcgtcctgaacaagcag
caggcctcctttttgcatgttgcaattcacaataagaggaaggaggtggttcttacgacc
atcaagaacaaaagatgggaagaatgccttaaggtttttagtcattattctccaagcaat
aaatgtccagtcatggaaatggtagaatacctccctgaatgcatgaaagtccttttagat
tgttgcataatcccctccacaggagacaagtcttgcaaagactaccatatcgagtataat
ttcacatatcttcagtgtccattagaatttaccaagaaagtaacacctgcacaggatgtt
acatatgagcctcttacaaccctcaatgtaatggtacaacataaccgcatagaacttctc
aaccatcctgtatgtaaagaatacttacttatgaaatggctggcttatgggtttagagcc
catgttatgaacttaggatcttactgtattggtctcctacctatgacatttcttgttacc
agtataaagccaggtatggctttcaactcaactggaatcatcaatgaaactcatgatcat
tcagaaatattagacactaagaattcatattttataaaagtttgcatgattttagttttt
ttatcaagtatatttggatattgcaaagaagtggtccaaattttccaacagaaaaggaac
tatattttggataacgccaatgcagttgaatggattatctacacaacaagcatcattttt
gtgtcccccttatttgttggtataccagcttctgtgcagtggcaatgtggggcaattgct
atatatttctactggatgaacttcttgttgtatcttcagagatttgaaaattgtggaatt
ttcattgttatgttggaggtaattgtgaaaactttgttaaggtctacggtcgtgtttgtc
ttccttcttctggcttttggtctcagcttttacgtcctcctgagcttgcaggatgctttc
agctctccattgctttctataatccagaccttcagcatgatgctaggagatattaattac
cgtgatgccttcttagaaccgtttttgagaaacgaattggcatatccagttctgtccttc
atacagattattgcctttaccatgtttgttccaattgtgctcatgaatttacttattggt
ttggccgttggcgacattgcagaggtccagaagcatgcattgttgaagaggattgctatg
caggtggaacttcataccagcttagagaagaagctgcccctctggttcctacgcagagta
gaccagaaatccgtcgttgtgtatcccaacagacccagatgttcagggttattgcgtata
tttcaatttctttttcacaccaaagaaacaagacaggaaattccaaatgttgacacatct
ctagaaatagaaatattgaagcaaaaatatcggctgaaggatctcacttctcttctggaa
aaacagcatgagcttatcaaactcatcattcagaagatggaaatcatctctgagacagag
gatgaagataaccatagttcttttcaagataggtttaaaaaagaacggttagaacaaagg
aatagcaagtggaattctgtattgaaagctgtaaagacaaagacccacagccctttgcct
tag
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