Neogale vison (American mink): 122903963
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Entry
122903963 CDS
T08764
Symbol
SOX17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122903963 (SOX17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122903963 (SOX17)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122903963 (SOX17)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox17_18_mid
HMG_box_2
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
122903963
NCBI-ProteinID:
XP_044100418
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Position
4:complement(79608904..79611299)
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AA seq
406 aa
AA seq
DB search
MSSPDAGYASDDQSQTRSALPAVMAGLGACPWAESLSPLGDMKVKGEAVANSGPPAGPAG
RAKGESRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKALTLAEKRPFVEE
AERLRVQHMQDHPNYKYRPRRRKQVKRLKRVEGGFLHGLAEPQVATLGPEGGRVAMDGLG
LPFPEQGFPAGPPLLPPHMGGHYRDCQGLGAPPLDGYPLPTPDTSPLDGVEPDPAFFAAP
MPGDCPAAGPYSYPQASDYAGPPEPPVGPMHSRLGLEQAGPAMPGHVAPSSALQLYYNAI
SSPAAGGGRGFPMQPQQHPPGPGQPSPPPEALPCRDGADPNQPAELLGEVDRTEFEQYLH
FVCKPEMGLPYQGHDSSVNLPDSHGAISSVVSDASSAVYYCNYPDV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcccggatgcggggtacgccagtgacgaccagagccagacccgcagcgcgctg
cccgcggtgatggccgggctgggcgcctgcccctgggccgagtcgctgagcccccttggg
gacatgaaggtgaagggcgaggcggtggcgaacagcgggccgccggctgggccggcgggc
cgagccaagggcgagtctcgcatccggcggccgatgaacgctttcatggtgtgggccaag
gacgagcgcaagcgcctggcgcagcagaaccccgacctgcacaacgcggagttgagcaag
atgctgggcaagtcgtggaaagcgctgactctggcagagaagcggcccttcgtggaagag
gccgagcggctgcgagtgcagcacatgcaggaccaccccaactacaaataccggccgcgg
aggcgcaagcaggtgaagcgactgaagcgggtggagggcggcttcttgcacggcctcgcc
gagccacaggtcgccacattgggccccgagggcggccgcgtggccatggatggcctgggc
ctgccctttcctgagcagggcttcccggccggcccgccgttgctgccgccgcacatgggc
ggccactaccgcgactgccagggactgggcgcgcctccgctcgacggctacccgctgccc
acgccggatacgtccccgctggacggcgtggagccggatcccgccttcttcgccgcgccg
atgcccggggactgcccagcggccggcccctacagctacccacaggcctcggactacgcg
gggcccccggagccgccagtcggccccatgcactcccgtctaggcctggaacaggcgggc
cctgcaatgccgggccacgtggcgccctccagcgccctgcagttgtactacaacgcgatt
agctcgccggcggcgggcggcgggcgcggcttccccatgcagccgcagcagcacccaccc
ggccccgggcagccgtcgccccctcccgaggccctgccctgccgggacggcgcggacccc
aatcagcccgccgagctcctcggggaggtggaccgcacggaatttgaacagtatctacac
ttcgtgtgcaagcccgagatgggtctcccttaccagggacatgactctagtgtgaatctc
ccagacagccacggggccatttcctcggtggtgtccgatgccagctctgcggtatattac
tgcaactaccctgacgtttga
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