Neogale vison (American mink): 122904343
Help
Entry
122904343 CDS
T08764
Symbol
TAF2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122904343 (TAF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nvs01002
]
122904343 (TAF2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nvs03021
]
122904343 (TAF2)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122904343 (TAF2)
Peptidases and inhibitors [BR:
nvs01002
]
Metallo peptidases
Family M1
122904343 (TAF2)
Transcription machinery [BR:
nvs03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122904343 (TAF2)
Coactivators
SAGA/TFTC/STAGA complex
122904343 (TAF2)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122904343 (TAF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1_N
Peptidase_M1
RNA_polI_A34
SR-25
RPN2_C
Motif
Other DBs
NCBI-GeneID:
122904343
NCBI-ProteinID:
XP_044100974
LinkDB
All DBs
Position
4:19962521..20054772
Genome browser
AA seq
1251 aa
AA seq
DB search
MPPTGLEPARMNRKKGDKGFESPRPYKLTHQVVCINNINFQRKSVVGFVELTIFPTVANL
NRIKLNSKQCRIYRVRINDLEAAFIYNDPTLEVCHNESKQRNLNYFSNAYAAAVSAVDPD
AGNGELCIKVPSELWKHVDELKVLKIHINFSLDQPKGGLHFVVPSVEGSMAERGAHVFSC
GYQNSTRFWFPCVDSYSELCTWKLEFTVDAAMVAVSNGDLVETVYTHDMRKKTFHYMLTI
PTAASNISLAIGPFEILVDPYMHEVTHFCLPQLLPLLKHTTSYLHEVFEFYEEILTCRYP
YSCFKTVFIDEAYVEVAAYASMSIFSTNLLHSAMIIDETPLTRRCLAQSLAQQFFGCFIS
RMSWSDEWVLKGISGYIYGLWMKKTFGVNEYRHWIKEELDKIVAYELKTGGVLLHPIFGG
GKEKDNPASHLHFSIKHPHTLSWEYYTMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLA
STASSQKFQSHMWSQMLVSTSGFLKSISNVSGKDIQPLIKQWVDQSGVVKFYGSFAFNRK
RNVLELEIKQDYTSPGTQKYVGPLKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNK
KKKIPLMNGEEVDMDLSAMDADSPLLWIRIDPDMSVLRKVEFEQADFMWQYQLRYERDVV
AQQESILALEKFPTPASRLALTDILEQEQCFYRVRMSACFCLAKIANSMVSTWTGPPAMK
SLFTRMFCCKTCPNIVKTNNFMSFQSYFLQKTMPVAMALLRDVHNLCPKEVLTFILDLIK
YNDNRKNKFSDNYYRAEMIDALANSVTPAVSVNNEVRTLDNLNPDVRLILEEITRFLNME
KLLPSYRHTITVSCLRAIRVLQKNGHVPSDPALFKSYAEYGHFVDIRIAALEAVVDYTKV
DRSYEELQWLLNMIQSDPVPYVRHKILNMLTKNPPFTKNMESPLCNEALVDQLWKLMNSG
TSHDWRLRCGAVDLYFTLFGLSRPSCLPLPELGLVLNLKEKKAVLNPTIIPEAIAGNQEA
AINPSSHAQLVGFPNPEDDHLAKEATCNMSAHQQGVKRKADTPLGSPLEPGQILEKNEDS
SKVKLKIRFSNSQDEEEIDMDTVHDSQAFISHHLNMLERPSTPGLSKYRPTGSRSALIPQ
HSPGCDGTPTTKPQWSMELARKGTGKEQSPLEMAMHPVAAAPLSVFTKETASSKHSDHHH
HHHHEHKKKKKKHKHKHKHKHKHESKEKDKEPFTFSSPASGRSVRSPSLSD
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgactggtttagagcccgccaggatgaacaggaagaaaggagacaagggcttt
gaaagcccaaggccatataaattaacccatcaggtggtctgcatcaacaatataaacttc
cagagaaaatctgttgtgggatttgtggaactgactatatttcccacagttgcaaacttg
aacagaatcaaattgaacagcaaacagtgtagaatataccgagtaaggataaatgattta
gaagctgcttttatttataatgacccaaccttggaagtctgtcacaatgaatcaaaacag
agaaatctaaattatttttccaatgcttatgcagccgcagttagtgctgtggatcccgat
gcaggaaatggagaactttgcattaaggttccatcagagttatggaaacacgttgatgaa
ttaaaggtcctaaagatacacatcaatttttctttggatcagccaaaaggaggtcttcat
tttgtggtacccagtgttgagggaagtatggcagagagaggtgctcatgttttctcttgt
gggtatcaaaattccacaagattttggttcccatgtgttgattcatactctgaattatgt
acatggaaattagaatttacagtagatgccgcaatggtggctgtttctaatggagatttg
gtggagacagtgtatacccatgatatgaggaagaagaccttccattacatgcttaccatt
ccaacagctgcatcaaatatctctttggccattggaccttttgaaatacttgtagatcca
tatatgcatgaggttactcatttttgtttacctcaacttcttccattgcttaaacatact
acatcatatcttcatgaagtttttgaattttatgaagaaattcttacatgtcgataccca
tactcctgttttaagactgtattcattgatgaggcttatgttgaagtggctgcttatgct
tccatgagcatttttagcacaaatctgttacatagtgccatgattatagatgagacgcct
ctgactagaaggtgtttagcccagtccttagcacagcagttttttgggtgtttcatatcc
agaatgtcttggtctgatgaatgggtactgaagggaatttctggctatatttatggactt
tggatgaaaaaaactttcggtgttaatgaataccgccattggattaaagaggagctagac
aaaatagtggcatatgaactaaaaactggtggagttttactacatcccatatttggtgga
ggaaaagagaaggataatccggcatctcatctacacttttcaataaagcatccacataca
ctttcctgggaatactacactatgtttcagtgtaaagctcacctcgtgatgagattgatt
gaaaataggatcagtatggaattcatgctacaggtcttcaataaactgctaagtttggct
agtactgcttcatcacagaagttccagtcacatatgtggagtcagatgttggtttccaca
tctggatttttgaaatccatctcaaatgtctctggcaaagacatccagcctttaataaag
cagtgggtagaccagagtggagtggtaaaattttatggaagttttgcatttaatagaaaa
cgaaatgttttggaattagaaataaagcaagattatacatctcctggaactcagaaatat
gtgggaccacttaaagtgacagtgcaggagttagatggatctttcaatcatacgttgcaa
atcgaagaaaacagccttaaacatgatattccctgtcattccaaaagcagaaggaataag
aagaaaaaaattccactcatgaatggagaagaagttgacatggatctttctgcgatggat
gctgattcccctttgctgtggataaggatagacccagatatgtcagtgctgaggaaagta
gaatttgagcaagctgatttcatgtggcagtatcagctccgctatgagagggatgttgtt
gcacagcaggagtccattctggccttggagaagttccctacgccagcatctcgccttgca
ctcactgacatattagaacaagagcagtgtttctaccgagtaagaatgtccgcttgcttc
tgcctcgcaaagattgcaaattcaatggtgagcacatggacaggaccaccagccatgaaa
tcactttttactcgaatgttttgttgcaaaacttgtccaaacattgtgaaaacaaacaac
tttatgagctttcaaagctattttctacaaaagactatgccagttgcaatggctttattg
agagatgttcacaacctttgtcccaaagaagtcttaacattcattttagacttaatcaag
tacaatgacaacagaaaaaataagttttcagataactattatcgtgctgaaatgatcgat
gcccttgccaactctgttacgcctgcagtcagtgtgaataatgaagttcgaactttggac
aacttaaatcctgatgtgcgactcattcttgaagaaatcaccaggtttttgaatatggaa
aaacttcttccaagttatagacacaccattactgtcagttgtttgagagccatacgagtg
cttcagaagaatggacatgttccaagtgatccagctctttttaaatcttatgcagagtat
ggccactttgtggacatcaggatagcagctttggaagcagtcgttgattatactaaagtg
gacaggagttatgaagaactgcagtggctacttaatatgattcagagtgaccctgtaccc
tatgtaagacataagattctaaacatgttgacaaagaacccaccatttactaagaacatg
gagtctccattatgcaatgaagccttggtagatcaactttggaaacttatgaattctgga
acgtcacatgactggaggttacggtgtggtgctgtggacttgtacttcacactctttggc
ctcagtagaccttcctgcttgcccttaccagagcttgggttggttcttaatctaaaagag
aaaaaagctgtcttgaatccgaccataattccagaggccatagcaggcaaccaagaagct
gcgattaatccaagtagtcacgcacagctagttggatttccgaaccctgaagatgatcac
cttgccaaggaagcaacatgtaatatgtcagctcatcagcagggagtgaagaggaaggct
gatacaccactggggtccccactagaacctggtcaaatactggagaagaatgaggatagc
agtaaagtcaaactcaaaatcagattttcaaattctcaagatgaggaggaaattgacatg
gacacggttcatgatagccaggcattcatttcccatcatttgaacatgcttgaaaggcca
tcgactccagggctctctaaataccggccaaccggctcccgatctgctttaataccccag
cactcaccaggctgcgatggcacacccaccacaaaaccccagtggagtatggaacttgca
cggaagggaacagggaaggagcagtcccctctggagatggctatgcacccagtggcagcg
gccccgctctccgtgtttactaaggagactgcgtcctccaaacacagcgaccaccaccac
caccaccaccacgagcacaagaagaagaagaagaagcacaaacacaagcacaagcacaag
cacaagcacgagagtaaagagaaggacaaagagcctttcactttctccagcccggccagc
ggccggtctgtccgttctccttctctttcagactga
DBGET
integrated database retrieval system
