Neogale vison (American mink): 122904379
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Entry
122904379 CDS
T08764
Symbol
DCAF13
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvs03009
]
122904379 (DCAF13)
04121 Ubiquitin system [BR:
nvs04121
]
122904379 (DCAF13)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
90S particles
Other 90S particles
122904379 (DCAF13)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122904379 (DCAF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
ANAPC4_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
122904379
NCBI-ProteinID:
XP_044101103
UniProt:
A0A8C7A8U8
LinkDB
All DBs
Position
4:complement(34267832..34298252)
Genome browser
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDLQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVNCMAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPGYGEEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDI
WDEQRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFVFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAAKDYNQKLKEKFQHHPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVN
RLKHSKPGSVAIVSEKKKHVVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaagatgctgagccggaacccggacaactatgtccgcgaaaccaaactggac
ttacaaagagttccaagaaactatgatcctaccttacatccttttgaggtcccgcgagaa
tatgtaagagctttaaatgctacaaaactggaacgggtatttgcaaaaccattccttgct
tctctggatggtcaccgagatggagtcaattgcatggcaaagcatccaaagagcctggct
actgtcctttctggggcatgtgatggagaggtcagaatttggaacttgactaaacggaaa
tgtatccgtacaatacaagcccatgagggttttgtacgaggaatatgtactcgcttttgt
gggacttctttttttactgttggagatgacaaaactgtgaagcaatggaaaatggatgga
ccgggttacggagaagaggaagaaccattacatacaatattaggaaagacagtgtataca
ggaattgatcatcactggaaagaagctgtttttgccacatgtggacagcaagtagacatt
tgggatgaacaaagaacaagtcctatctgttcaatgacctggggattcgacagcataagt
agtgttaaatttaacccaattgagacatttctcttgggaagttgtgcttctgacaggaat
atagtactatatgatatgaggcaagctactcctctgaaaaaggtcatcttagatatgaga
acaaatacaatttgttggaaccctatggaagctttcgtttttactgcagcaaatgaagat
tacaacttgtatacgtttgatatgcgtgcgctggacactcctgtaatggtacatatggat
cacgtgtctgcggtgcttgatgtggattattctcccactgggaaagagtttgtgtctgct
agttttgataaatctattcgtatctttcctgtggacaaaagtagaagcagggaagtctat
cacacaaagagaatgcaacatgttatctgtgtaaaatggacttctgacagcaaatatatt
atgtgtggatctgatgaaatgaacattcgtctgtggaaagctaatgcttctgaaaaattg
ggtgtgcttacatcacgagaaaaagcagccaaagattataaccagaagttgaaggagaaa
tttcaacatcatcctcatataaaacgcatcgctcgtcaccgacatctaccaaaatctatc
tacagccagatccaggaacagcggatcatgaaggaagctcgccgacgaaaggaggtgaat
cgtctcaaacatagcaagcctggatctgtggcaattgtgtcagagaagaagaaacacgta
gtggcagttgtgaaataa
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