Neogale vison (American mink): 122904436
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Entry
122904436 CDS
T08764
Symbol
RAD54B
Name
(RefSeq) DNA repair and recombination protein RAD54B isoform X1
KO
K10877
DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122904436 (RAD54B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122904436 (RAD54B)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
122904436 (RAD54B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
HDA2-3
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
122904436
NCBI-ProteinID:
XP_044101225
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Position
4:42077855..42170967
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AA seq
909 aa
AA seq
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MRRSAAPSQLQGNPFKKLKFIPPGRSNPSLDEENTKSPDVKLLEAVASKNTFLQLQNNPR
ICSSNLSTDGSSREINRGHNNSGKHYSEASVMATLDPPHTVHSAPKEITVFKRQEEEEPD
SLVKYFSVLWCKASKKKHKKWEGDAVLIVKGKSFTLKDLEGKDIGRGVVYKFKELEKIEE
GHRLMIGGKEVEVMGIISPDDFSSGRCFQRGGGSSAISSSSQAAKKCFSNPFKSVCKSSS
KENRLNSFQDCRPRHDPYAPNSLVMSRPNNNCQWTFNKNCFPIVDVVIDPHLVYHLRPHQ
REGIIFLYECVMGMRVNGRCGAILADEMGLGKTLQCISLIWTLQCQGPYGGKPVIKKTLI
VTPGSLVNNWNKEFQKWLGSERIKIFPVDQDHKVEEFTKSPFFSVLIISYEMLLRSLDQI
KSVKFDLLICDEGHRLKNSAIKTTTALMSLSCEKRIILTGTPVQNDLQEFFALIDFVNPG
ILGSLSSYRKIYEEPIILSRQPSASEEEKELGEKRAAELSCLTGLFILRRTQEIINKYLP
PKIENVVFCRPGALQIELYRKLLNSQAVKFCLRGLLGNSPHLICIGALKKLCNHPCLLFS
SIKEKEYSSTWDGNEERTLYEGVVDVFPADYNPLMFTEEESGKLQVLLKLLAVIHELRPT
EKVVLVSNYTQTLNILQEVCKRHGYTYTRLDGQTPVFERQKIVDGFNSKYSSDFIFLLSS
KAGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKHPVHIYRLLTTGTIEEKIYQ
RQISKQDLSGAVVDLTKTSEHIQFSVEELKNLFTLHESSHCVTHDLLDCECTGDKEGTGD
SLEKFPISRNCQLGPHQKHNSLKPLSMSQLKQWKHFSGDHLNLADPFLERIRENVSFIFQ
NITNQSTAI
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgagacgatctgccgcaccaagtcagttgcaggggaatcccttcaaaaaactaaaattt
ataccaccagggagaagtaatccaagtctagatgaagagaatacaaagagtccagatgta
aaattacttgaggctgttgcaagtaagaatacctttctccagttacaaaataatcccaga
atatgcagttcaaatctgtctactgatggaagctctagagaaattaatcgtgggcataat
aacagtggaaaacactattctgaagcatctgtaatggcaacgttagatccacctcataca
gttcactcagcccctaaagaaataacagtgtttaagagacaagaagaggaagaaccggat
agcctagttaaatatttcagtgttctttggtgtaaggcttcaaagaaaaaacacaaaaag
tgggaaggtgatgctgttctcattgtaaaaggaaagtcatttacattaaaggatttggaa
ggcaaagacattggaagaggcgttgtgtataaattcaaagagcttgaaaagattgaagag
ggccacagactgatgattggtggaaaagaagtagaagtcatgggtataatctctccagat
gatttcagtagtggcagatgttttcagcgtggaggaggaagctctgctatttcaagttct
tctcaagctgccaagaagtgtttctctaacccctttaaaagtgtttgtaaatcgagttca
aaggaaaatagactgaatagcttccaagattgcagaccacgccatgacccatatgctcca
aattctcttgtaatgtcacgacccaacaataattgccagtggacattcaataagaattgt
tttcctattgtggatgtggtgatagatcctcaccttgtatatcatcttcgaccacatcag
agagaaggaatcatattcctttatgaatgtgtaatgggaatgagagtgaatggcagatgt
ggagctattcttgctgatgaaatgggtttagggaaaacattgcaatgtatttcgctcatc
tggactctgcagtgtcagggaccctatggaggcaagccagtaataaagaagacgcttatt
gtcacacctggaagcttggtgaataattggaataaggaatttcaaaaatggctaggaagt
gaaagaatcaaaatatttcctgttgatcaggaccacaaagtagaagaattcactaaatct
ccatttttttctgttcttatcatcagttatgaaatgttacttcgttctttggatcaaatt
aagagtgtaaaatttgatcttctaatctgtgatgagggccatcgtttgaagaatagtgcc
attaagacaactacggccctcatgagcctctcctgtgagaaaagaataattctaactggt
actccagttcagaatgatcttcaagaattttttgcattaattgattttgtaaatccagga
atattaggttctttgtcgtcttacagaaaaatatacgaagaacccattattctatcaaga
cagccttctgcttctgaggaagaaaaagagttaggagagaaaagagcagctgaacttagt
tgccttactggactctttatccttagaagaacccaagaaattattaataaatatcttcca
cctaaaatagagaatgtagtcttttgtcgaccaggagcgctacagattgaactttatcga
aagctgttgaattctcaagctgttaagttctgccttcgaggattgttgggaaatagtcct
catctaatatgtataggagctcttaaaaaactgtgcaatcacccctgcctgttgttcagc
tctataaaggagaaagaatatagctcaacttgggatggaaatgaggaaaggactctctat
gaaggcgtggtagatgtgttccctgctgattacaacccgctcatgtttaccgaggaagag
tctggaaaactacaggtgctgttgaagctcttagcggttatccatgaacttcgtcctact
gaaaaggtggtgttggtatccaactatacacaaaccttgaatattctacaagaagtatgc
aagcgtcatggatatacttacacgaggcttgatggacaaacaccagtctttgaaagacag
aaaattgttgatggcttcaatagtaaatactcttctgattttatttttttgttaagttcc
aaagctggtggtgtgggacttaacctcattggaggatctcacttaattctctatgacatt
gactggaatccagccactgatatccaggcgatgtctagagtatggagagatggtcagaaa
catcctgtacatatttacagactcctaaccacaggtacaatagaagaaaagatttatcaa
agacagatcagtaagcaggatctttctggggcagtcgtagacctaaccaagacatctgaa
catatccagttttcagtagaggagctaaaaaatttgttcaccttacatgaaagttcacat
tgtgttactcatgacctgcttgactgtgaatgtacaggagacaaagaaggtacaggtgat
tcactggaaaaattccctatctctagaaattgtcagcttggtccacatcagaagcacaac
tctctgaaacctctctccatgtcacagctgaaacaatggaaacatttttctggagatcat
ttaaatcttgcagatccttttcttgaaagaataagagaaaatgtctccttcatttttcag
aatataaccaatcaaagtactgctatataa
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