Neogale vison (American mink): 122904571
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Entry
122904571 CDS
T08764
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122904571 (CHD7)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122904571 (CHD7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
MUN
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
122904571
NCBI-ProteinID:
XP_044101479
LinkDB
All DBs
Position
4:complement(73921028..74110014)
Genome browser
AA seq
3000 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPSTN
QNQTKLTHFDHYNQYEQQKMHLMDQPNRMMSSAPGNGLASPHSQYHAPPVPQVPHGGSGG
GQMGVYPGLQNERHGQSFVDGGSMWGPRAVQVPDQIRAPYQQQPQPQPPQPAPSGPPAQG
HPQHLQQMGSYMARGDFSMQQHGQPQQRMSQFPQGQEGLSQGGPFIATSGPGHLSHVPPQ
SPSMAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAVRPQTLTFSSRSQTVPS
PTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPSAVGFPSNSGQGL
MHQQPMHPSGSRNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGMP
MEVSSYPNMPHPQPPHQPPGAMGIGQRNMGPRNLQPSRPFMGMSSAPRELAGHMRPNGCP
GVGLADPQAIQERLLPGQQHPGQQPSFQQLPTCPPMQPHPGLHHQSSPPHPHHQPWAQLH
PSPQNTPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDYLPSVEQQPQQKKKKK
KNNHIVAEEPSKSFGKDDFPGGVDSQELNRNSLDGSQEEKKKKKRPKVKKDPKEPKEPKE
KKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVNKGKTEG
SENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEVDDADAAGRD
SPSNTSQSEQQESVDTEGPVVEKIMSSRSIKKQKDSGEEVEVEEFYVKYKNFSYLHCQWA
SVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDERGEPV
THYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSRE
YKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV
IAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAII
TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV
EELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
EETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA
EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDI
LEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS
MSGRESAANGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIE
SEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQ
TRLYSAVKEDELMEFSDLESDSEEKPCTKPRRPQDRSQGYARSECFRVEKNLLVYGWGRW
TDILSHGRYKRQLTEQDVETICRTVLVYCLNHYKGDENIKSFIWDLITPTADGQTRALVN
HSGLSAPVPRGRKGKKVKAQSTHPVVQDADWLAGCNPDALFQEDSYKKHLKHHCNKVLLR
VRMLYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVFKH
GYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTR
TPFKDEIDEFANSPPEDKEESMEIRTTGKPSESTAELGQLYWPSTSTLTTRLRRLITAYQ
RSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTF
GVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPAKPDDEPPDLSS
MIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLL
VGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGSMSSLTPLAIGFCQTSAVLSSAH
VQEEKATGQSEGKVEESGSAAAQEKAEGKEEEEETDGGEKDSKQGCEAEASSVKSELKGM
EVSADTGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARD
ETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFD
FQGLIPGYTPPTMDSPLQKRSFAELSMVGQASISGSEDLTTSPQLSKEDALNLSVPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREAASSTSNFSSL
TSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPVKRRRGRRKNVEG
LDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLV
GEDAPKNKDLVEWLKLHPSYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTL
TGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTEIVKQSGFVPESMFD
RLLTGPVVRGEGASRRGRRPKSEIARAAAAAAAAAAAAASTSGINPLLVNSLFAGMDLTS
LQNLQNLQSLQLAGLMGFPPGLATAAAAGGDAKNPAAVLPLMLPGVAGLPNVFGLGGLLN
SPLPAAAGSATPAPGQGEPEDGASQAEEKGAENEDENKDSEKSTDAVSATDSANGSVGAA
TAPAGLPSSPLAFNPFLLSTMAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSGEEK
APDKAEGAAFQEEENLEGSDAEENLDKTAESSVFEDEIAQGEELDSLDGGDELENHENDE
NT seq
9003 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgggaatgatgagtctttttggcgaggatgggaatattttcagtgaaggc
ctcgaaggccttggagaatgtggttaccctgaaaatcccgtgaaccccatgggtcagcaa
atgccgatagaccagggctttgcctccttgcagccatcccttcatcatccctccacgaat
cagaatcagacgaagttgacccatttcgatcactataatcagtacgagcaacaaaagatg
catctgatggatcagccaaacaggatgatgagcagcgcccctgggaacgggctcgcgtct
cctcactcgcagtatcacgcccctcccgtccctcaggtcccccacggcggcagtggtggc
ggtcagatgggagtctaccctggcctgcagaatgagaggcacgggcagtctttcgtggac
ggcggctccatgtggggcccgcgggccgtgcaggtgccggaccagatacgggcgccctac
cagcagcagccccagccgcagccgccccagcccgccccgtcggggccccccgcgcagggc
caccctcagcacctgcagcagatgggcagctacatggcccgtggggatttttccatgcag
cagcacggtcagccccagcagaggatgagccagtttccccaaggccaggagggcctcagt
cagggcggtcctttcatcgccacgtcgggccccggccacctgtcccacgtgcccccgcag
agccccagcatggcgccttccttgcgtcactcagtgcagcagttccaccatcacccccct
actgctctccacggagaatccgttgcccacagtcccagattctcccctaatcctcctcag
caaggggccgtgaggccacagacccttacctttagttctcggagccagacagtcccctca
cctactataaacaactcagggcagtattctcgatatccttacagtaacctaaatcaggga
ttagttaacaatacagggatgaatcaaaatttaggccttacaaataatactccaatgaat
cagtccgtacccagataccccagtgctgtagggttcccctcaaacagtggtcagggacta
atgcaccagcagcccatgcaccccagcggctcccgtaaccaaatgaacacgcaaactatg
catccttcacagcctcagggaacttatgcctctccacctcccatgtcacccatgaaagcg
atgagtaatccggcaggtactcctcctccgcaggtcaggcccggaagtgccggcatgccg
atggaagttagcagttatccaaatatgccccaccctcagccgccacaccagccccccggt
gccatgggaatcggacagaggaatatgggccccaggaacctgcagccgtctcgtccgttt
atgggcatgtcctcagcaccaagggagttggccgggcacatgagaccgaacggctgtccc
ggtgttggccttgcagatccccaagcgatccaggagcgactgctgcccggccaacagcat
cctgggcagcagccgtctttccagcagttgcccacctgcccaccgatgcagcctcacccg
ggcttgcaccaccagtcttcacccccacacccacatcaccagccttgggcacagctccac
ccatcaccccagaacaccccgcagaaagtgcctgtgcctcagcattctccgtcggagccc
tttctggagaaaccagtgccggatatgactcaggttagtggaccgaacgctcagctagtg
aagagtgatgattacctgccgtccgtagagcagcagccacagcagaagaagaagaagaag
aaaaacaaccacattgttgccgaggagcccagtaaaagttttggtaaagatgacttccct
ggtggggttgatagccaagaactaaataggaactcactagatgggtcccaagaagagaaa
aagaaaaagaaaaggccgaaggtaaaaaaagatccgaaggaaccgaaagaacccaaggag
aaaaaagagcccaaggaacccaagaccccgaaagcccctaagattcccaaagagccaaag
gaaaagaaagcaaaaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataag
aaacctgattcagaagcaagtgctttgaagaaaaaggtcaacaagggaaaaacagaaggt
tctgaaaattcagacttagacaaaacgcccccaccatctcctcctcctgaagaagatgag
gacccaggtgttcagaagagacgttccagcaggcaggtgaagagaaagcgatatacggaa
gatttggagttcaagatttccgacgaggaggtagatgatgcggacgctgctgggagagac
tccccctccaacacctcgcagtcagagcagcaggaatctgttgatacagaaggtccagtg
gtagaaaaaatcatgagtagtcgttcaataaaaaaacagaaggactctggagaggaggta
gaagttgaggaattctatgtgaaatacaaaaacttctcttatcttcattgtcaatgggca
tctgtagaagatctggaaaaagataagagaattcagcaaaagatcaaacgatttaaggca
aagcagggccagaacaaattcctttcagagattgaagatgagctttttaatccagattat
gtggaggttgaccggataatggactttgcacgtagcacagatgagcggggagagccggtg
actcactacctggtgaagtggtgctccctgccatatgaagacagcacttgggagctaagg
caggacatagatcaagcgaagatcgaagagtttgagaaactaatgtccagggagccagaa
acagagcgtgtggagcgacctcctgctgatgattggaagaaatcggagagttccagggag
tacaaaaacaataacaaactcagggaataccagttggagggagtaaactggctacttttc
aattggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaaaactatc
cagtccattacatttctctatgagatatatttgaaaggaatccatggcccttttttagta
attgccccattgtccacaatccccaactgggaaagggagttccgtacctggacagagttg
aacgtggttgtgtaccatgggagtcaagctagtcgtcggaccattcagttgtatgaaatg
tacttcaaagatccccagggtcgagtgataaaggggtcctataagtttcatgccatcatc
actacatttgagatgattttgacggattgtcctgagctgcgaaatattccatggcgctgt
gtagtcattgatgaagcccacaggctgaagaataggaactgcaagctgctggaggggctg
aagatgatggacttggaacacaaagtgctgctgacggggacgcctctccagaacactgtg
gaagagctcttcagcttgctgcatttcttggaaccgagtcgcttcccttcagaaaccacc
tttatgcaagaatttggtgatctgaaaacagaagaacaggtgcagaaactccaggctatt
ctaaagccaatgatgttgcgacgtctcaaggaggatgtggaaaagaacttggcccccaaa
gaagaaactattattgaagttgagctaacaaacattcagaagaaatattaccgagccatc
ctggagaagaatttcacatttctctccaaaggtggtggtcaagctaacgtccctaacctt
ttaaacactatgatggagctacggaagtgctgcaatcatccgtaccttattaacggtgct
gaagagaaaattttggaagagtttaaagaaacacacaatgccgactctccagattttcag
ctccaggcgatgatccaggctgctggcaagctagtgctgattgacaagctgctgccaaaa
ctgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacata
ctggaggactacctcattcagagacggtacccgtatgagaggatcgacggcagagtgaga
ggaaatctccgccaggcagctatcgaccgattctccaaacctgattctgatcggtttgtt
ttcctcctgtgcacaagggcgggaggtttaggcattaatcttactgctgctgatacctgc
atcatcttcgattccgactggaatccccagaatgatctccaggctcaggctagatgtcat
aggataggacagagcaaatctgtgaaaatctacaggctgattacgaggaattcttacgag
agggagatgttcgacaaggcgagtctgaagctcggcctggataaagctgtgctgcagtcc
atgagtgggagagagagcgccgccaacggggtacagcaactttccaagaaagaaatagag
gatctgctccgaaaaggggcctatggcgccctcatggatgaggaggatgaagggtctaag
ttctgcgaagaagatattgatcagattctcctgcgccgcacccacacgatcaccattgag
tctgaagggaaaggttccacatttgctaaggccagttttgttgcatctggaaataggaca
gatatttccttggatgatccaaatttctggcaaaagtgggcaaagaaggctgaattggat
attgatgccttaaatgggaggaataacctggttattgacactccgagagtgaggaagcaa
accaggctctacagtgcagtgaaagaagacgagctgatggaattctcagacttggaaagt
gattccgaagagaagccttgcacaaagccgcggcggcctcaggacaggtcacagggctac
gcacggagcgagtgctttagagttgagaagaatctgctcgtttacggctggggacggtgg
acagatatcctctcccatggccgctacaagcgccagctcaccgagcaggacgtggagacc
atctgcagaaccgtcctcgtgtactgtctcaatcattacaagggggatgagaatatcaaa
agcttcatctgggacttgatcacacccacggcggatggccagacgcgagccttggtcaat
cactctggtttatctgccccagtgccaaggggcaggaaagggaagaaggtgaaagcccag
agcacacatcccgtggtgcaggatgccgactggctggcgggctgcaacccggacgccctg
ttccaggaggacagctacaagaagcacctgaagcatcactgtaacaaggtcctgctgcgt
gtccgcatgctatactacctaagacaagaagttataggagaccaggcggataagattcta
gagggtgctgactcaagtgaagctgatgtgtggatccctgagcccttccatgctgaagtc
cccacagactggtgggataaggaagcagataagtccctcctcattggagtgttcaaacac
ggctacgagaagtacaactccatgagagccgaccccgcactgtgcttcctggaacgcgtt
ggtatgcccgatgccaaggccatagctgccgagcaaagaggaacagacatgctagcagat
ggcggtgacgggggagaatttgatagagaagatgaggacccagaatataaaccaaccagg
acgccattcaaggatgaaatagatgaatttgcaaattctcctccagaagataaggaggaa
tccatggaaattcgcaccacaggcaagcccagcgagagtactgctgagttaggccaactc
tactggcccagcacctcgaccctgactacccgtctgcgccggctcattactgcctatcag
cgcagctataaaaggcaacaaatgaggcaggaggctctaatgaagactgaccggcggagg
cgacggccccgggaggaagtgagagcactagaagcggaaagggaagctataatatctgag
aaacgacaaaagtggacgagaagagaagaggctgatttttaccgcgtggtatctactttt
ggagttatttttgaccccatgaaacagcagtttgactggaaccagttccgagcctttgcc
agacttgacaaaaagtctgatgagagtttggagaaatacttcagttgttttgtggccatg
tgtaggcgagtgtgtcgaatgcccgccaagccagacgatgaaccccctgacctctcctcc
atgatcgagccaatcacagaagagcgcgcctcccgaactctctaccgcatcgagctgctg
cggaagatccgcgagcaggttcttcaccaccctcagctgggggagaggctgaagctctgc
cagccgagtttggatttgccggagtggtgggaatgtgggaggcatgaccgagacttgctg
gttggtgctgctaagcacggggttagtcggacggattatcacatcctcaatgaccccgag
ttatctttcttggatgcgcacaaaaactttgctcagaacagaggggcagggagcatgtcc
tccctgaccccactggccatcggattttgccagacttctgccgtcctctcatctgctcat
gttcaggaggagaaggcgacaggacagagtgaaggcaaagtggaggagtctggaagtgca
gctgcccaagagaaagccgagggaaaggaggaggaggaagagaccgatggtggggagaag
gacagtaagcagggatgcgaggccgaggccagctctgtcaagagtgaactgaaagggatg
gaggtcagtgcagatacagggcccaagtctatttcagaaaaaggttctgaagaggacgag
gaagaaaagctggaggatgatgataagtcagaggaatcttcccagcctgaagcaggagct
gtctctcgagggaagaatttcgatgaggaaagcaatgcttccatgagcaccgctagggat
gaaacccgagacgggttctacatggaggacggagacccttcagtagcccagctccttcat
gaaagaacatttgccttctcattttggcctaaggaccgagtaatgataaaccgattagac
aacatctgtgaagcagtgctgaaaggcaaatggccagtaaacaggcgccagatgtttgat
ttccagggcctcatccctggttacacgccacccaccatggacagccccctgcagaagagg
agctttgccgagctctccatggttggccaagctagcatcagtggcagcgaggacctcaca
acttcccctcagttgtccaaggaagacgccctaaacctctccgtccctcgccagcggagg
aggaggaggagaaaaattgaaatcgaggccgaaagagctgccaagcggcggaacctcatg
gaaatggttgcccagctgcgggagtctcaggtggtctcagaaaatggacaagaaaaagtt
gtagatttatcaaaggcctcaagagaggcagcaagctctacctcaaatttttcatctctt
acttcaaagtttatcttgcctaatgtctcgacaccggtgtccgatgcctttaagactcaa
atggagctgctccaggcaggcctgtcacgcacacccacgaggcatctgctcaatggctcc
ctggtggatggagagcctcctgtgaagaggaggcggggaaggaggaaaaacgtggagggt
cttgatctgcttttcatgagccacaaacggacgtcattgagtgcagaggacgctgaggtg
accaaagctttcgaagaagatatagagaccccgcctacaagaaacattccttctcctgga
cagctggacccagacacgcggatccctgtgataaatcttgaagatgggactaggctggtg
ggggaggacgctcctaaaaataaggacttagttgaatggctgaagctgcatccttcctac
actgttgatatgccaagttatgtaccaaagaatgcggatgtgctgttttcctcatttcag
aaaccgaaacagaaacgacatagatgtcgaaaccctaataaattggatataaacactttg
acaggagaagaaagggtgcctgttgtcaataaacgaaatggaaagaagatgggtggagct
atggcacctccaatgaaggacctgcccaggtggctggaagagaaccctgaatttgcagtt
gccccagactggactgagatagtgaagcaatctggtttcgttcccgagtcgatgtttgac
cggctcctcaccggccccgtggtgcggggggaaggagccagcaggcgaggacggaggccc
aagagcgagatcgccagggcggcggcggcggcggcagcggcagcggcggcggcggcctcc
acgtcgggcatcaaccctctgctggtgaacagcctgtttgctgggatggacctcacgagc
ctgcagaacctacagaacctgcagtctctccagctggcgggcctcatgggcttccctccg
ggactggccacggcggccgcggccggaggcgacgcgaagaaccccgcggccgtgctgccg
ctgatgctgccgggcgtggccggcctgcccaacgtgttcggcctgggcgggctgctcaac
agccccctgcccgccgcggccggcagcgccacgccggcgccgggccagggggagccggag
gacggcgcctcccaggccgaggagaagggcgccgagaacgaggacgagaacaaagactcg
gagaaaagcacagatgctgtttcggccactgactcggcgaatggatctgttggtgctgct
actgccccggccggactgccctccagcccgctcgccttcaacccgttcctcctgtccacc
atggcgccagggctcttctacccatccatgtttctacctccaggactggggggattgacg
ctgcccgggttccccgcgttggcaggactccagaacgccgtgggctccggcgaggaaaag
gcccccgacaaggccgagggggccgccttccaggaggaggagaacctggaaggcagcgac
gccgaggagaacctggacaagactgcggagtcctccgtcttcgaagacgaaatagcacag
ggtgaagagctggactcgcttgacgggggggacgaactagaaaaccatgaaaatgatgaa
taa
DBGET
integrated database retrieval system
