Neogale vison (American mink): 122904603
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Entry
122904603 CDS
T08764
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04140
Autophagy - animal
nvs04211
Longevity regulating pathway
nvs05010
Alzheimer disease
nvs05014
Amyotrophic lateral sclerosis
nvs05016
Huntington disease
nvs05017
Spinocerebellar ataxia
nvs05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122904603 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
122904603 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122904603 (RB1CC1)
05014 Amyotrophic lateral sclerosis
122904603 (RB1CC1)
05016 Huntington disease
122904603 (RB1CC1)
05017 Spinocerebellar ataxia
122904603 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
122904603 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvs01009
]
122904603 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122904603 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
nvs03029
]
122904603 (RB1CC1)
Protein phosphatases and associated proteins [BR:
nvs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122904603 (RB1CC1)
Membrane trafficking [BR:
nvs04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122904603 (RB1CC1)
Mitochondrial biogenesis [BR:
nvs03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122904603 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Jag_N
SpoIIID
Motif
Other DBs
NCBI-GeneID:
122904603
NCBI-ProteinID:
XP_044101540
UniProt:
A0A8C7C507
LinkDB
All DBs
Position
4:81398765..81494326
Genome browser
AA seq
1593 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHSKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKTSTEL
VLSPDMPRTTNQSLLTSFHKSLEHIAPDTTDAENGKEIRESCQSTVQQDETSVDAKDSDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCIAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPLLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSASSPRIESATG
IATTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
VCGKEDIGDHASLNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTA
LEIRNIIEKVKYSLEITLNEKHQRELQSLKSEYEGKLDALMKESEENENKIKKLKGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHTQNCEINELKQSREIVLEE
LKKLHVENNEKMQLLRTELQCLEQSHLKELEDALRVRHTQEFEKVMADHKVSLEKLKKEN
QQQIDQIQESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEEC
RAQQKETLKSLLEQETENLRTEISKLNQRIQDNNENYQVGLAELRTLMTIEKDQCISELI
SRHEEESDTLKAELNKVTSLNHQAFEIEKNLKGEIAELQSKLDAELSALEKQKDEKLTQQ
EEKYEAIIQKLEKDKENLVMNQEQNREQLIQKLNCEKEEAIHTALKEFKLERDTVEKELL
EKVKHLENQIAKSLAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMKKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEE
KKKLEEEVSKLRSSSFVPSAYVAAAPELYGACAPELPGETERSAMETQDEGKVDSAMETS
MMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF
QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVME
KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacactggaactaccctgacatttgacactgaactt
acagtgcaaactgtggcagatctcaagcatgccattcatagcaaatacaagattgctatt
cagcatcaggtgctggtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgc
acctacagtgctgggacggacacaaatccaatttttcttttcaacaaagaaatgatttta
tgtgatcgtccacctgctattccaaaaactactttttcaacagaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcatactgttgcttcaagaacacaa
cttgcagtggaaatgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtc
catgatgaacatcttcagcaccaaggctgggctgcaattatggccaatctggaggactgt
tcaaattcttaccaaaagctacttttcaagtttgaaagtatttattcaaattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttacctgaacatgaaggctcagaaaaggctgaaatgaaaacctccactgaactg
gtgctctctcctgatatgcctagaacaactaaccaatccttgttaacctcatttcacaag
tcattggaacatatagccccagataccacagatgctgaaaatggaaaagaaattagggaa
tcttgtcaaagtactgtccagcaggatgaaacttcagtagatgctaaagacagtgatctg
cctttttttaatgtttctttgttagactggataaatgttcaagatagacctaatgatgtg
gaatcgttggtcaggaaatgctttgattccatgagcagacttgatccaaggattattcgg
ccatttatagcagagtgccgtcaaactattgccaaacttgataatcagaatatgaaagcc
attaaaggacttgaagaccggctctatgccctggaccagatgattgctagctgcagccga
ctggtgaatgaacagaaggaactcgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgttttacctgatttgtgcctgagtcacgcaaatcagttgatg
attatgttgcaaaatcatagaaaactgttggatattaaacagaagtgtaccactgccaaa
caggaactagcaaataacctacatgtcagactgaagtggtgttgctttgtaatgcttcat
gctgatcaagatggagagaaattgcaagctttgctccgccttgtaatagaactgttagaa
agagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcatagctgttgtt
gaggttgtaaggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc
aaagatggaaagcgattatatgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcctttttaagaaatcgtctgtttaggggattggactcctggcccccgtcc
ttttgtacacagaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttcttcaatcattttgtccttcagaagttcagccactcctcagggtcccctta
ctttgtgactttgaacctctacaccagcatgtacttgctctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctattgagtgaacaaaaggca
tccatgagtcagacgtccccacagtcggcttcgtcaccaaggatagaaagtgcaacagga
attgcaactactacctcaccaagaactcctcctccactcactgttcaggatcccttatgt
cctgcagtatgtcccttagaagaattatctccagatagcattgatgcacatacatttgat
tttgaaactatcccccatccaaacatagaacagactattcaccaagtttcattagatttg
gattcattagcagaaagccctgaatcagattttatgtctgctgtaaatgagtttgtaata
gaagaaaatttgtcatctcctaatcctataagtgatccacagagtccagaaatgatggtg
gaatcactttattcatctgttatcaatgcgatagacagtagaaggatgcaggatacaaat
gtatgtggtaaagaggatataggagatcacgcttctctaaatgtccagttggaaaagtgt
cgagttgttgcccaagactcacacttcagtatacagaccatcaaggaagacctttgccac
ttcagaacatttgtacagaaagaacagtgtgacttctcaaattctttaaaatgtacagca
ctagaaataagaaacattattgaaaaagtaaaatattctctggaaataacactaaatgaa
aaacatcaaagagagctgcagtctttaaaaagtgaatatgaaggcaaacttgatgcactt
atgaaagaaagtgaagaaaatgaaaacaaaattaaaaagcttaaaggagacttggtatgc
cttgaggaggttttacaaaataaagataatgaatttgctttggttaaacatgaaaaagaa
gctgttatctgcttgcaaaatgaaaaggatcagaagttgttagagatggaaaatataatg
cacactcaaaattgtgaaattaatgaactgaaacagtcacgagagatagtgttagaagaa
ttaaagaagctccatgttgaaaataatgagaagatgcagttgttgcggacagaacttcag
tgtttagagcaaagtcatctaaaggagttagaggatgctctgcgtgtcaggcacactcag
gagtttgagaaagttatggcagaccataaagtgtctttggagaaactaaaaaaggaaaat
cagcaacaaattgatcagatacaagagtctcatgccacagttatccaggagaaagaacaa
cagctacaggaattaaaactgaaggtttcagatttgtctgacatgagatgtaagttagag
gttgaacttgcattgaaggaagcagaaactgatgaaataaaaattttgctggaagaatgc
agagcccagcagaaggagaccttaaaatctctccttgaacaagagacagaaaatttgaga
acagagataagtaaactaaaccaaaggattcaggataataatgaaaactatcaggtgggc
ttggcagagctaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt
agtagacatgaagaagaatctgatacgcttaaagctgaattaaacaaagtaacgtcattg
aatcaccaagcatttgaaatagaaaaaaacctgaaaggagaaatagctgaactgcagagt
aaattggacgcagaattgagtgctcttgaaaaacaaaaagatgaaaaactcacccaacag
gaagagaagtatgaagccattattcagaaacttgagaaagacaaagagaatcttgtcatg
aaccaggaacaaaacagagaacagttaattcagaagcttaattgtgaaaaagaagaagct
attcacactgccctaaaagagtttaaattggagagagatactgttgagaaagagttacta
gaaaaagttaaacatcttgagaatcaaatagcaaagagtcttgccattgaatctaccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagcttcaggaagaaaaagcaaag
tttctagaacaacttgaagagcaagagaaacgaaagaatgaagaaatgcaaaatgttcga
acatctctgattgctgaacaacagaccaattttaacactgttttaacaagagagaaaatg
aaaaaagaaaacataatcaatgatcttagtgataagttgaaaagtacaatgcaacagcaa
gagcgagataaagatttgatagagtcactatctgaagatcgagctcgtttgcttgaggaa
aagaaaaaacttgaagaagaagtcagtaagctgcgtagtagcagttttgttccttcagca
tatgtagctgcagccccagaactttatggagcttgtgcacctgaactcccaggtgaaaca
gagagatcagccatggaaacacaagatgaaggaaaagttgattcagcaatggagacaagc
atgatgtctgtacaagaaaatattcatatgctctctgaagaaaaacagagaataatgctg
ttagaacgaacattacagttgaaagaagaagaaaacaagcggttaaatcaaagactgatg
tctcagagcatgtcttcggtatcctcaaggcattctgaaaagatagctattagagatttt
caggttggagatttggtactcatcatcctagatgagcgccacgacaattatgtgttattt
actgttagtccaaccttgtattttctgcattcggagtctctgcctgccctggatctcaaa
ccaggtgagggtgcttcaggtgcatctagaagaccctgggtacttggaaaagtaatggaa
aaggaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacaaag
ttctacagagtgaaagctgtgtcatggaataagaaagtataa
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integrated database retrieval system
