Neogale vison (American mink): 122904900
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Entry
122904900 CDS
T08764
Symbol
NUP42
Name
(RefSeq) nucleoporin NUP42 isoform X1
KO
K14321
nucleoporin-like protein 2
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122904900 (NUP42)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122904900 (NUP42)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122904900 (NUP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_CCCH_4
zf-CCCH_4
zf-CCCH
zf-CCCH_2
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
122904900
NCBI-ProteinID:
XP_044102147
UniProt:
A0A8C7B0T2
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Position
4:179150586..179173505
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AA seq
416 aa
AA seq
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MTICQFFLQGRCRFGDRCWNEHPGAGGAGGGRQQQPSGNNRRGWNTTSQRYSSVIQPSSF
SKSTPWGGSRDQEKPSFSSFNSGASTSRNRGFGVSQNPFASSSPDGQKDEKKLLEGIIKD
MEIWESSGQWMFSVYSPMKKKPNISGFTDISPEELRLEYHNFLTSSNLQSYLNSLQQLIN
QWRNRINELKSLNTSTNIALLSDVKDGINQPAPAFGFGSTNAVTFGSPGFPVNNSSSANA
QNFSFKPSSAPSGSPPMFGNTPAFGAAPSASSAITTSVPAFGFGKPAITSAASFSFKSPA
ATGFGSPGFSGFPTSMAAGSFGAPGAPAFGSGTSVAGFGSLGSHSHTAFSKSSSNTFGNN
SISTSLPVSNGSTTTDNKLFTPKDQLTAEELEQFQSKKFTLGKIPLKPPPMELLNI
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgaccatttgtcagttcttccttcaaggccggtgccgctttggagaccggtgctggaac
gaacatcccggcgccgggggtgcgggcggaggacggcagcagcagccctcaggtaataac
agacgtggatggaataccaccagccaaagatactccagcgttatccagccatccagcttc
tccaaatcaacaccatgggggggcagcagagatcaagaaaagccatcttttagttccttc
aattctggagcttcaactagcaggaacagagggtttggagtgtcccagaacccatttgct
tcatccagccctgatgggcagaaagatgaaaagaaacttctggaaggaattataaaagat
atggaaatttgggaatcatcaggacagtggatgttttctgtttattcaccaatgaaaaag
aaacctaatatttcaggttttacagacatttcaccagaggagttgaggcttgaataccat
aacttcttaaccagcagtaacttacagagttatctaaattccctccaacagttaataaat
caatggagaaatagaataaatgaactgaagagcctaaatacatcaactaacatagccttg
ctctcagatgtaaaggatggaataaatcaaccagcacctgcatttggatttggcagtaca
aatgcagtaacatttggatcaccaggttttccagtgaataacagcagcagtgctaatgct
cagaattttagttttaaaccaagctctgccccttctggaagtcctcctatgttcgggaat
actccagcatttggagctgcaccctctgccagttctgccatcactacttctgttccagca
tttggatttgggaaacctgcaatcacatctgctgcttcattttcttttaaaagtcctgca
gccactggttttggatcacctggattttcaggatttccaacttccatggcagcaggctct
tttggagctccaggggccccagcctttggaagtggtacttctgtggctggttttggtagt
ctaggttcacattcccacactgctttttccaagtcatctagcaacacctttggaaacaat
agcatatctacctctctcccagtctcaaatggcagcaccacaacagataacaaattattc
acacccaaggatcaactcacagcagaagaactggagcaatttcaatccaagaaatttact
ctaggaaaaattcccttaaagccaccacctatggaacttctaaatatttga
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