Neogale vison (American mink): 122904953
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Entry
122904953 CDS
T08764
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04621
NOD-like receptor signaling pathway
nvs05132
Salmonella infection
nvs05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122904953 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122904953 (NOD1)
05133 Pertussis
122904953 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
nvs04054
]
122904953 (NOD1)
Pattern recognition receptors [BR:
nvs04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122904953 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
RsgA_GTPase
AAA_16
AAA_22
AAA_18
ABC_tran
PIF1
AAA_25
Motif
Other DBs
NCBI-GeneID:
122904953
NCBI-ProteinID:
XP_044102246
LinkDB
All DBs
Position
4:complement(185439246..185507082)
Genome browser
AA seq
952 aa
AA seq
DB search
MEKQGHSEAGIISSESHSHVKLLKIHRELLVTHIRNTQCLVDNLLKNDYFSSEDAEIVGA
CPTQPDKVRKILDLAQSKGEEVSEFLLYVLQQLTDAYVDLRPWLSETGFSPSELIQSKVV
INTDPVSRYTEKLRQQLARDSKFVLCYAQKEELLLDETYSDTIVELVGFSNESLGPLESL
SCLLDHRTGVLSEQGETIFICGDAGVGKSMLLQRLQSLWAAGRLDTEFKFFFHFRCRMFS
RFKEGDTLCLQDLLFKHYCYPEQDPEEVFAFLLRFPQTALFTFDGLDELHSDFDLSSALD
TCSPWEPAHPLVLLTNLLSGKLLKGAGKLLTARTGVEIPRQLLRKKVLLRGFSPSHLRAY
TKRMFPERAVQEHLLAQLEANPNLCSLCAVPLFCWIIFRCFQHFHSIWEGSAQLPDCTVT
LTDVFLLVTEVHLNRTQPTSLVQRNTRSQTETFHAGRGTLRSLGQVAHGGMEKSLFVFRQ
EEVQAAGMQEGELQLGFLRAVPEQGLGGDQQSYEFFHITLQAFFTAFFLVVDDKVDTGQL
LRFFQEWAPGGAGAESCYPPCLPFPCLKGSGLAGEDPFKNKDHFQFTNLFLCGLLSKAKQ
KLLQHLVPAAALQRKRKALWAHLFASLRAHLQNLPRVKSGAFNQVQAMPTFVWMLRCIYE
TQSEKVGQLAAKGICANYLKLTFCNVCSADCSALSFVLHHLRKRLALDLDNNNLNDYGVQ
ELQPCFSRLTVIRLSVNQITDSGVKVLYEELTKYKILTFLGLYNNQITDVGARYIARILD
ECKGLTHLKLGENKITSEGGKCLAVAVKNSKSIFEIGMWGNRIGDEGAKAFAEALRNHPS
LTNLSLAFNGISREGGKSLAQALEQNTSLRIFWLTKNELDDEVAESLAEMLKVNQTLKHL
WLIQNQITAKGIAQLADALQRNTGIMEICLNGNLIKPEEAKVFEDEKRIICF
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcagggccacagtgaggcgggaataatctcatctgagtctcactcccatgtt
aaattattgaaaatccaccgggaacttctggtcacccacatccgcaacacccagtgtctg
gtggacaacttgctgaagaatgactacttctcttctgaagatgcagagatcgtgggtgcc
tgccccacgcagcccgacaaggtccgcaaaattctggacctggcacagagcaagggcgag
gaggtgtctgagttcctcctctatgtgctccagcaactcacagatgcttacgtggatctc
aggccttggctgtcggagactggcttttccccctcggagctcattcagagcaaagttgtc
atcaacaccgacccagtgagcaggtacacggagaagctgcgacagcaactggcccgtgat
tccaagttcgtcctgtgctacgcccagaaggaggaactgctgctggacgagacatacagc
gacaccatcgtggagctggtgggcttcagcaacgagagcctgggcccgctggagagcctg
agctgcctgctggaccaccgcaccggggtcctcagcgagcagggcgagaccatcttcatc
tgcggggacgcgggcgtgggcaagtccatgctgctgcagcgcctgcagagcctgtgggct
gcggggcggctggacaccgagttcaagttcttcttccacttccgctgccgcatgttcagc
cgcttcaaggagggtgacacgctgtgcctgcaggacctgctcttcaagcattactgctac
ccggagcaggaccccgaggaggtgttcgctttcctgctgcgtttcccccagacggccctc
ttcaccttcgacggcctggacgagctgcactcagactttgatctgagcagcgcattggac
acctgctccccctgggagcccgcccaccccctggtcctgctgaccaacctgctcagcggg
aagctgctcaagggggctggcaagctgctcacagcccgcacaggcgtggagatcccacgc
cagcttctccgcaagaaggtgctcctgcggggcttctcccctagccacctgcgcgcctac
acgaagaggatgttccccgaacgcgctgtgcaggagcacctgctggcccagctggaggcc
aaccccaacctctgcagcctgtgtgccgtgcccctcttctgctggatcatcttccgctgt
ttccagcacttccacagcatttgggagggctctgcgcagctgcccgactgcacggtgacc
ctcaccgacgttttcctgctggtcactgaggtgcacctgaacaggacgcagcccaccagt
ctggtgcagcggaacacgcgcagccagaccgagaccttccacgccggccggggcaccttg
cgctcgcttgggcaggtggcccatggtggcatggagaagagcctctttgtgttccgccag
gaggaggtgcaggcagctgggatgcaggagggggagctgcagctgggcttcctgcgggcc
gtaccggagcagggcctgggcggggaccagcagtcctacgagtttttccacatcaccctc
caggccttttttactgccttctttctcgtggtggatgacaaggtggacactgggcaactg
ctcaggtttttccaggagtgggctcctgggggggcaggagccgaatcctgctatcccccc
tgtctccccttcccgtgcctgaagggcagtggcctggcaggggaggaccccttcaagaat
aaggatcactttcagttcactaacctcttcctgtgcgggctgttgtctaaggccaaacag
aaactcctgcagcacctggtgcccgccgctgccttgcagagaaagcgcaaggccctgtgg
gcacacctgtttgccagcctgcgggctcacctgcagaacctgccccgcgtgaagtctggg
gccttcaaccaggtgcaggccatgcccacctttgtctggatgctgcgttgcatctacgag
acgcagagcgagaaggtggggcaactggcggccaagggcatctgcgccaactacctcaag
ctgaccttctgcaacgtgtgctcggcagactgcagcgccctctccttcgtcctgcaccat
ctccgcaagcggcttgcccttgacctggacaacaacaatctcaacgactacggcgtgcag
gagctgcagccttgcttcagccgcctcacggtcatcagactcagtgtaaaccagatcaca
gacagtggggtgaaggtgttgtatgaagagctaaccaaatacaaaatcctgaccttctta
ggcctgtacaacaaccagatcactgatgtgggagccaggtacattgccaggatcctggac
gagtgcaaaggcctcacgcacctcaaactgggggagaacaaaataacgagtgaaggagga
aagtgcctggctgtggctgtgaagaacagcaaatcaatcttcgaaatcgggatgtggggc
aacagaatcggtgatgaaggagcaaaggccttcgcagaggctctgaggaaccaccccagt
ctgactaacctcagtcttgcattcaacggcatctccagagaaggaggaaagagccttgca
caggccctggagcagaacacctctctgagaatattctggctcaccaaaaatgaactggat
gacgaagtggcagagagcctggcagagatgttgaaagtcaaccagacattgaaacattta
tggcttatccagaaccagatcacagccaaggggattgcccagctggcagatgccttacag
aggaacactggcatcatggagatctgcctaaatggaaatctgataaagccagaggaggcc
aaagtctttgaagacgagaagcggatcatctgcttctga
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