Neogale vison (American mink): 122905350
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Entry
122905350 CDS
T08764
Name
(RefSeq) LOW QUALITY PROTEIN: lipoxygenase homology domain-containing protein 1-like
KO
K19538
retinitis pigmentosa 1
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nvs03037
]
122905350
04812 Cytoskeleton proteins [BR:
nvs04812
]
122905350
Cilium and associated proteins [BR:
nvs03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
122905350
Cytoskeleton proteins [BR:
nvs04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
122905350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
DUF7755
FGF
ATS3
Motif
Other DBs
NCBI-GeneID:
122905350
NCBI-ProteinID:
XP_044102919
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All DBs
Position
4:complement(79076922..79376717)
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AA seq
945 aa
AA seq
DB search
MVGNIGTLFKIRIGHTNSGPSPSWHCKQIQLWNMNSGKEFYIPVQRWLARDQEDGEICRE
FPVLNKGQPILPVTVYEVHVATGERWNAGTGASVYISIYGEKGDSGSRQLFRSKNSFSFL
RGQTDTFSLEAVHLGDLYKIVIGHDGVGPGNGWFLDDVVIKDPVTNREYTFFCHRWLDQG
EDDGKIARELQVMDNSIIFASECHILENSXYYDGXGKYDSAEINNFLFFIPSGQKLEFNR
KETWAAERWKFMKGNTLQFYNRLTGGFVRLHPDGTVDAIGEKTDKYGLFDVIFNRGNICI
FQSHEIRHLSLAIDNSNVTGMATGGACTELRVLYQHDRCALLESVLVPGHVVTVDHHGKI
ADESSAGYADLSKEFVVFVKGVFLNSAVVLLATSLCQALCLQPDGSCTGVGSQSEKSYWK
VHKISSGICMFESVKNERMYLRIKDGQCDGTGTGDTDCHFKIKKNLENASISLESMKSPG
LFVGLQPDGQAKPVIYTKNGNVFFYPQVIKLVRYYVDVHTGQLKQAETESEVSLCLCGER
GDSGLRLLDKSNMPVKFQRGQTDTFQVETVSLGKLQKVLLHCEASEESQYWYCEKVVVRE
PGTASESVFTCERWLPFMSQGIIHSEIELYLEEGDWKVTIVTGDLENAGTTATVSLYVYG
EATCSGPIILGSGKYQLFNPNSADIFKINLKDIGEIYKVRIGHDNSGKDPAWYLEEIRLE
NIDTCEVYCLAVDSWIAENENGGDLWKEVPMARTNKAPLPVNGLVGVPGGDKKADSADSD
LFTGSGSRLSSGETHDNGRGVLGPQPWPKKRLMLGFVVVYEIYMYTGRKPGAETEANVVI
NLIGTRGDSGNRRLHQSQNNTVKFRRGQVDIFSIEAVSLGKLKKVLISHDGTGPGNGWFL
ESIIVKSEEEDGSQEVLFPCNRWLDEYQDDGRTERELFAEHEVSL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggttggaaacattggaacactctttaagattcgtattggtcatactaactctggaccc
tccccttcctggcactgtaaacagatacaattgtggaacatgaattctggaaaagagttt
tatatacctgttcaacgatggttggcacgagatcaagaggatggggaaatctgtcgagaa
tttcctgttttaaacaaaggacaacccatacttccagtgacagtatacgaagtgcatgtg
gcaacaggtgagcgttggaatgctggaacaggagcaagtgtgtacatttctatctatggg
gaaaagggagattcaggatctagacaactatttcgatcaaagaactccttcagtttttta
agaggacaaactgacaccttctccctagaagctgtgcatcttggggatttgtataagatt
gtcataggtcatgatggggttggcccaggaaatggctggtttcttgatgatgttgtaatc
aaggatccggtaacaaatcgtgaatataccttcttctgtcacaggtggttggatcaaggg
gaagatgatggtaagattgccagagaactgcaagtaatggataacagcatcatctttgca
agtgagtgtcatatattagaaaattctncttactatgatggttgaggaaagtatgattct
gctgaaattaataattttcttttttttattccctcaggtcagaagctagaatttaataga
aaagaaacatgggctgcagaaagatggaagtttatgaaaggaaatactctacaattctac
aacaggctcactggagggtttgtccgtctgcatccagatggcacagttgatgcaattgga
gagaagacagacaaatatggtctctttgatgttattttcaacagaggaaatatatgcatt
ttccaaagtcatgaaataagacatctttctcttgctattgacaatagcaatgtcactgga
atggctactggtggagcctgtactgagctgcgggtgctttatcagcacgaccgttgtgca
cttcttgagtcagtgctggttcctggtcatgtagttactgttgatcatcatggcaaaata
gctgatgaatcatcagcaggctacgcagacctttcaaaagaatttgtggtttttgtcaag
ggtgtgttcctcaacagtgctgtggttctacttgctaccagcctgtgccaagccctgtgt
ctccagcctgatgggagctgcactggagtgggaagccagtctgaaaaatcctactggaaa
gtgcataaaatcagctctggtatttgcatgtttgaaagtgtgaaaaatgaacggatgtat
ctaaggattaaggatggccagtgtgatggaacaggtacaggagatactgactgtcatttt
aaaattaagaagaacttggaaaatgcatctataagcctggaatccatgaaaagcccagga
ttgtttgttggacttcagccagatggacaggcaaaaccagttatttatactaagaatggg
aatgttttcttctatccacaggtcatcaaattagtgagatactatgttgatgtccatact
gggcaactgaagcaagcagaaacagagtctgaagtttccctgtgtctctgtggagagagg
ggagactccggtcttagactgctggacaaatctaatatgccagtaaaatttcaaagagga
cagactgatacatttcaagtggaaacagtgtcacttggaaaactgcagaaggtgctgttg
cactgcgaggccagtgaggaatcccagtattggtactgtgagaaggttgtggtcagagaa
cctgggactgcatcagagtctgtcttcacctgtgaaagatggcttccctttatgtctcag
ggcataattcattcagaaattgaactttatcttgaagaaggagattggaaggtgaccatt
gtcactggggatcttgaaaatgctggcactacagcaacagtatctctttatgtctatgga
gaagcaacatgttcaggtcctattattttgggatctggaaaataccagctgtttaaccct
aacagtgcagatatattcaagattaatcttaaagatattggtgaaatatataaagtacgc
attggacatgacaacagtggaaaggatcccgcatggtatctggaagaaattaggcttgaa
aatatagatacatgtgaggtgtattgtctagctgttgactcctggatagctgagaatgaa
aatggtggagatctatggaaagaagtgcccatggcaagaactaataaagcacctttacca
gttaatggcctggtgggcgtgccggggggtgataagaaggctgactcagctgacagtgac
cttttcacaggttctggctcccggctttcttcaggggagacccatgataatgggagggga
gttttggggccacaaccatggccaaagaaacgtttgatgctaggttttgtagtggtttat
gagatctacatgtacacgggcaggaagccaggcgcagagacagaggctaacgtggttatc
aacctcattggcaccagaggagattcagggaaccgaaggcttcatcaatcccaaaataac
acagtcaagtttcggcgtggacaggttgatattttttccattgaggcagtgtctctggga
aaactgaagaaagttctgattagtcatgatgggacaggtccaggtaacggatggtttcta
gagagtattattgttaagtctgaagaggaagatggcagtcaagaagtgctgtttccatgc
aaccggtggctagatgagtaccaagatgatggcaggactgaacgagaattgttcgcagaa
catgaagtctcactgtga
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