Neogale vison (American mink): 122905736
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Entry
122905736 CDS
T08764
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122905736 (SHPRH)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122905736 (SHPRH)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122905736 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
SfNPV_sf27
PEP-utilisers_N
LMBR1
TPR_10
TPR_12
Motif
Other DBs
NCBI-GeneID:
122905736
NCBI-ProteinID:
XP_044103062
LinkDB
All DBs
Position
1:56952466..57042058
Genome browser
AA seq
1683 aa
AA seq
DB search
MSSRRKRAPPVRVDEEKQQQLHWNMHEDRRNEPLTLTDDEHPSSGSDFSSAHCIILDDSL
KEEVAHQDKKRCSEAVSISKSMDKEETGGLFSPLSAKLNIVISPYHSDNSWKAFLGELTL
QLLPEQSLIEHFSERSFTLMSSESSNHFLIYVNSECEDVEKQEKGLSEPVSICDKGIRVE
SSFSGEMLEDLGWLQKKRRIKLYQKPEGNHMIKVGIYLLEGGLAKLDFLSDANSRMKKFN
QLMKRVMEKLHSFVIPDVLEEDEDDSESEPEGQDIDELYQFVKQTHQQEALSIQVDVQHP
ALIPVLRPYQREAVNWMLRQERFRSAPTSENALHFLWREIVTSEGLKLYYNPYTGCIIRD
YPNAGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHYSG
GKVKNTETQNMEFEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQR
NRSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKES
RKSGNKDTDSEYLPSNTSDDDDDPYYYYYKARKNRSKFRKKPVPSTKKGKGQPNISLSSQ
DQCPATSDSGITDVTTSKSTCIFEGKQEHAAGDRAESPADGDMPQSTVMSPCNSSDYRFE
CICGELDQVDRKPRVQCLKCHLWQHAKCVNYEEKNLKIKPFYCPHCLVAMEPVSTRATLI
ISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELN
YVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPAVKAAEMAQRLSG
INRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQLLYSFIAEIL
WRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKLS
SLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEAH
RQLVCALNGLAGIHIIKGEYALAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELLV
AKHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALQPVQQTIRELQRKIYSNSP
WWLNVIHRAIEFAIDEELVQRVRNEITSNYKQQIDKLSMSEKFHDCRGLQFLLTTQMEEL
NKFQKLVREAVKNLEGPPSRNVIESATICHLRPTRLPLNCCVFCKADELFTEYESKLFSH
TVKGQTAIFEEMIEDEEGLVDDRIPTTSRGLWAVSETERSMKALLSFAKSHRFDVEFIDE
GSTSMDLFEAWKKEYKLLHEYWMALRNRVSAIDELAMATERLRVRHPKEPKPNPPVLHII
EPHEVEQNRIKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQLG
KQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHKEISYVFTSEKASQEE
DIPVKGSHSTKVEAVVRTLMRIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQISR
VKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVHR
IGQTKPTIVHRFLIKATIEERMQAMLKTAEKSHTNSSVKHPEASVLTLADLADLFTKETE
ELE
NT seq
5052 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccggcggaaacgtgctcctccagtgagagttgatgaggaaaagcagcagcag
cttcattggaatatgcatgaagacagaaggaatgaacctctcaccctaactgatgatgag
cacccctcatcgggttcagatttctcttctgctcactgtatcatcctagatgatagtcta
aaggaagaagtggctcaccaagataagaagaggtgttccgaggcagtgagcatctcaaaa
tcgatggataaagaagaaactggtggccttttttctcctttatctgcaaagctgaatatc
gtgatttctccctatcactccgacaattcttggaaggcatttctgggagaattaactctt
cagcttcttcctgaacagagtttaattgaacatttttctgaaaggagttttacactgatg
agttcagagtcaagcaatcatttcctgatctatgttaattcagaatgtgaagatgtagag
aaacaagaaaaaggactcagtgagccagttagtatttgtgacaagggtattagagtggaa
tcatccttcagtggtgaaatgttagaagatttggggtggctacaaaagaagagaagaata
aaactttaccaaaaaccagaaggaaatcacatgatcaaggttggaatttatcttttggaa
gggggcctagcgaaactagactttttgagtgatgcaaattcaagaatgaagaagttcaat
caactcatgaaaagagtgatggagaagttacacagttttgttattccagatgtgttggaa
gaggatgaggatgattcagagagtgagccagaaggacaggacattgatgagctctatcag
tttgtgaagcaaacacatcagcaagaagcactgtccattcaagtggatgtccagcatcct
gcattgattcctgtgttgagaccataccagagagaggctgtcaattggatgctacgacaa
gagcgtttcagaagcgctcctactagtgaaaatgccctgcacttcttatggcgtgagatt
gttacatctgagggtttgaaactctactacaatccatatacaggctgcatcatccgtgat
tacccaaatgctgggccacagttgcttggtggcatcttagcagatgagatgggtcttgga
aagacagtggaggttttggctctgattctgacacatactcgacaggatgtcaaacaagat
gctctcactcttccggagggaaaagtggtgaattatttcattccatcacattattctgga
ggaaaagtaaaaaacacagaaacccagaatatggaatttgaaccaaaagaaaaagttcag
tgcccacctacacgtgtgatgatcctgacagctgtgaaagaaatgaatggaaagaaagga
gtttccatcctttccatctataagtatgtcagttctatatatagatatgatgttcagcgg
aacaggagtcttctgaaacggatgctgaaatgtttaatttttgaaggtcttgtgaaacag
atcaaaggccatggtttttctggaacttttacattggggaagaattacaaggaagaggat
atatgtgataaaacaaaaaaacaggcagtagggagtccaaggaaaattcagaaagaatcc
agaaaatcagggaacaaagacacagattctgaatacttaccatcaaacacatctgatgat
gatgatgatccttactattattactataaggctcggaaaaatcgtagtaaattcaggaaa
aagcctgttccatccacaaaaaagggaaaaggtcagcctaacatcagtctcagttcacaa
gatcagtgtccagctaccagtgactctggaattactgatgttaccacatctaaaagtaca
tgtatctttgaaggaaagcaagaacatgcagcaggagaccgagctgaatcacctgctgat
ggtgatatgccacagtctactgtgatgagtccctgtaattcctctgattatcgctttgag
tgcatatgtggtgaacttgaccaagtagaccgtaaacctcgtgttcagtgcctgaagtgc
cacctatggcagcatgcaaaatgtgtgaattatgaagagaagaatttgaagattaaacct
ttttactgcccccactgccttgttgcaatggagccagtatcaacaagagcaactttgatc
atctcgcctagttctatctgtcatcagtgggtggatgaaatcaacaggcatgtgaggtca
tcatctcttcgagtcttggtataccaaggagtgaagaaagacggttttttacaacctcat
tttttggctgaacaggatatagttatcattacctacgatgtccttcgttcagaactaaac
tatgtagatatcccacacagcaacagtgaggatgggcgtcgcctacggaaccagaagcgc
tatatggccattcccagcccccttgtagctgtggagtggtggaggatctgccttgatgaa
gcccagatggttgaatgccctgctgtaaaagcagcagaaatggctcagcgcttgagtggg
attaatcgctggtgcatcagtggcactccagtgcagagaggactagaggatctttttggg
ttggtggtctttcttggtattgaaccttactgtgtcaaacactggtgggttcgacttctt
tatcgcccttactgcaagaagaatcctcagctcctctacagctttattgccgagatactc
tggagatctgcaaagaaagatgtgattgaccaaatccagatacctcctcagacagaagaa
atccactggcttcacttttctccagtggaaaggcatttctatcaccgtcagcatgaagta
tgctgccaggatgctgtagtaaaactcaggaagatttctgactgggcactgaagctcagc
agcctggaccgaaggacggttacctctatcctgtatccactgctgaggctcaggcaggcc
tgctgccacccacaggcggttcgtggggaattcttgccactccaaaaaagcactatgaca
atggaagagctgctgacatctctgcagaagaaatgtggaactgaatgtgaagaagcacat
cggcagctagtttgtgctctcaatggcttagcaggcatccacatcattaaaggtgagtat
gccttggcagcagagctgtacagagaagtgttgcgttcatctgaggaacacaaaggaaaa
ctcaaaacggattcactccagagacttcatgctacccataacttgatggaactgttggta
gccaaacacccaggaatacctcctaccttacgagatggcagacttgaggaagaggccaaa
cagctgcgagagcattatatgagcaagtgtaacacagaagtggctgaagcccagcaggct
ctgcaacccgtgcagcagaccatacgggagctccagaggaagatttattctaattctcct
tggtggctgaatgtgatccacagagcaatagaatttgctattgatgaggaacttgttcag
cgagtgcgaaatgaaataacgagcaactacaagcaacaaattgacaagctttctatgtca
gagaagttccatgactgcagaggtcttcagttcttacttacaacacaaatggaggagcta
aataaattccagaagttagtaagagaagctgtaaaaaacctggaggggcctccatctcgt
aatgttattgaatcagcaacaatctgccacctccgaccaaccagacttcctctcaactgc
tgtgtcttttgtaaggctgatgaattgttcacagagtatgaatcaaagctgttttcccac
actgtcaaaggccagactgcaatatttgaggagatgatagaagatgaagaagggctggtg
gatgatcgaatacccaccactagccggggtctgtgggcagtaagtgagacagagcgatct
atgaaagcattgctgtcatttgcaaagtcacacagatttgatgttgaattcattgatgaa
ggaagtacttcaatggacctttttgaagcatggaagaaagaatataagttgcttcatgag
tattggatggctctgaggaatcgtgtgtctgctattgatgaacttgcaatggctacagaa
cgattaagagtacgtcatcctaaggagccaaagcctaatccacctgttcttcatatcatt
gaaccacatgaggtagaacaaaatcgcataaaactactaaatgataaagctgttgcgact
tcacagcttcagaaaaagcttgggcagcttctttacctaacaaacttggagaagtctcaa
gataaaacatcaggaggcattaatccagaaccttgtccaatctgtgctcggcagctggga
aaacagtgggcagtactgacctgtggacactgtttctgtaacgagtgcatttcaattatt
attgagcagtacagcgtggggtctcatagaagctccattaagtgtgccatctgccgccag
accacatctcacaaagaaatctcatatgtcttcacctccgagaaagccagccaggaagaa
gatatccctgtgaagggtagccattctacaaaagtggaagctgtggtcagaactctgatg
agaatccagcttagagacccgggcgctaaagcactcgtcttctcaacgtggcaagatgta
ttagacattatttcaaaagccctcactgataacaacatggaatttgctcagatcagtcgt
gttaagacatttcaggaaaacctttcagcatttaaacatgatcctcaaatcaatattttg
ctgctgcccctgcacacaggttctaatggattaactatcattgaagcaactcatgttctc
ttggtggagcccatactgaaccctgcccatgagcttcaggccattgggagggtgcaccga
attggacaaacaaaacctaccattgtacacagattcctaattaaggcaacaatagaagaa
agaatgcaagcaatgctgaaaactgctgagaagagtcacacaaactcatcggtgaagcat
ccagaggcctccgtcttaactttggctgatctggcagacctttttaccaaagaaactgaa
gaacttgaatga
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integrated database retrieval system
