Neogale vison (American mink): 122905881
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Entry
122905881 CDS
T08764
Symbol
ALYREF
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
nvs03015
mRNA surveillance pathway
nvs03040
Spliceosome
nvs05014
Amyotrophic lateral sclerosis
nvs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122905881 (ALYREF)
09122 Translation
03013 Nucleocytoplasmic transport
122905881 (ALYREF)
03015 mRNA surveillance pathway
122905881 (ALYREF)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122905881 (ALYREF)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
122905881 (ALYREF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122905881 (ALYREF)
03041 Spliceosome [BR:
nvs03041
]
122905881 (ALYREF)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122905881 (ALYREF)
TREX complex
122905881 (ALYREF)
Spliceosome [BR:
nvs03041
]
Complex C
Other components
EJC/TREX
122905881 (ALYREF)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
122905881 (ALYREF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
F07F6_N
Motif
Other DBs
NCBI-GeneID:
122905881
NCBI-ProteinID:
XP_044103141
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All DBs
Position
5:1141502..1145282
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AA seq
257 aa
AA seq
DB search
MADKMDMSLDDIIKLNRSQRGGRGGGRGRGRAGSQGGRGGGAQAAARVSRGGGPIRNRPA
IARGAAGGGGRNRPAPYSRPKQLPDKWQHDLFDSGFGGGAGVETGGKLLVSNLDFGVSDA
DIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQYNGVPLDGRPMNIQL
VTSQIDTQRRPAQSVNRGGMTRNRGSGGFGGGGGTRRGTRGGSRGRGRGTGRSSKQQLSA
EELDAQLDAYNARMDTS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggccgacaaaatggacatgtctctggacgacatcattaagctgaaccggagccagcga
ggtggccgcggcggaggccggggccgcggcagggccggctcccagggcggccgtggcggc
ggggcgcaggccgccgcgcgagtgagccgaggcggcgggcccatccggaaccggccggcc
atcgcccgcggcgcggcgggcggcggcggcaggaaccggccggcgccctacagcaggccc
aaacagcttccggacaagtggcagcatgacctgttcgacagcggcttcgggggcggcgcg
ggcgtcgagactggggggaaactgctggtgtccaacctggatttcggagtgtccgacgct
gacattcaggagctcttcgctgaattcgggaccctgaagaaggcggctgtgcactatgac
cgctccgggcgcagtttaggaaccgccgacgtgcactttgaacggaaggcagacgccctg
aaagctatgaagcaatacaacggggtccccctggatggccgccccatgaacatccagctc
gtcacgtcacagatcgacacgcagcggagacccgcacagagtgtgaacagaggcgggatg
accagaaaccgcggctccgggggttttggtggcggcggcggcacccggagaggcacccgc
ggaggaagccggggcaggggcagaggcactggccggagttcaaagcagcagctttctgca
gaggagctggacgcccagctggacgcttataacgcgagaatggacaccagctaa
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