Neogale vison (American mink): 122905942
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Entry
122905942 CDS
T08764
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122905942 (TNRC6C)
03036 Chromosome and associated proteins [BR:
nvs03036
]
122905942 (TNRC6C)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122905942 (TNRC6C)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Gene silencing
piRNA pathway
122905942 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
Motif
Other DBs
NCBI-GeneID:
122905942
NCBI-ProteinID:
XP_044103273
LinkDB
All DBs
Position
5:complement(3729235..3824149)
Genome browser
AA seq
1722 aa
AA seq
DB search
MATGSAQGTFTGHTKKTNGNNGTNGALVQSPSNQSALGAGGASGNGNGARVWGVATGSSS
GPAHCSLSGGDGKMDNMIGDGRSQNCWGASNSNAGINLNLNPNANPAAWPVLGHEGTVAT
GNPSSICSPVSAIGQNTGNQNGNPTGTLGAWGNLLPQESTEPQTSTSQNVSFSVQPQNLN
TDGPNNTNPMNSSPNPVNAMQTNGLPNWGMAVGVGAIVPPHLHGLPGANGPSVSQGSGSG
GEGISSSVWGLSPGNPAPGSGNSGFGQGNGDTVNSALSAKQNGSSSAVQKEGNGGSAWDS
GPPAGPGLLAWGRGSGNSSGVSHIHSGAWGHPSRSTSNGVNGEWGKPPNQHSNSDVNGKG
SAGWDSPSGSSQNPAMQPGSEHMNSWAKAATSGTTASEGSSDGSGSHNEGSSGREGAEGR
RRDKGMIDQGHIQLPRNDLDPRVLSNTGWGQTPVKQNTAWEFEESPRSERKNDNGTEAWG
CAATQPSNSGGKSDGSIVNSTNTSSVSGWASAPPAAGPASTGWGDGSSKAPSGPGVWGDS
ISSTAVSNAAAATKGGHAWSGTVNQEDKSPTWGEPPKPKSQNWGDGQKSNPAWSAGGGDW
ADSSSVLGHLGDGKKNGSGWDADGNRSGSGWNDAPRSGPSGWGNGTNTKGNPGTNWGESL
KPGPQQNWAGKPQDNNVSNWGGAASVKQTGTGWIGGPVPVTQKDGSEATGWEEPSPPSIR
RKMEIDDGTSAWGDPSNYNNKTVNMWDRNNPGLQSSATAAAAAATATASSSADVAETPPP
HPAGAQLSRSPLLGPVSAGWGEMPNVHSKAESSWGEPSSPSALVDNGTAAWGKPPSSGSG
WGDPPAEPPVTFGRASAPAAAPALCKPASKSMQEGWGSGGDDMNLGASQWEDEEGGVWNN
AASQESAASCSSWGSAPKKGLPKGMKTSGKQDEAWIMSRLMKQLTDMGFPREPAEEALKS
NNMNLDQAMSALLEKKVDVDKRGLGVTDYNGVVTKALGCRPPVSKDSSGDRPTFLDKDGG
LVEEPTTSPFLPSPSLKLPLSNSALPNQALGGIASGLGMQNLNSSRQIPSGNLGMFGSSG
AAQARTMQQPPQPPVQPLSSSQPSLRAQVPPFLSPQVQAQLLQFAAKNIGLNPALLTSPI
NPQHMTMLNQLYQLQLAYQRLQIQQQMLQAQRNVSGPMRQQEQQVARTITNLQQQIQQHQ
RQLAQALLVKPPPPPHLPLHPSAGKSAMDSFPPHSQAPGLPDLQTKEPQASPSTFAPYPL
AGLTPNMNVNSMDMTGGLSVKDPSQSQSRLPQWTHPNPMDNLPGAASPLDQNPSKHGAIP
GGLSIGPPAKSSIDDSYGRYDLIPNSESPASPPVAVPHSWSRAKSDSDKISNGSSINWPP
EFHPGVPWKGLQNIDPENDPDVTPGSVPTGPTINTTIQDVNRYLLKSAGSSPPSSQSAAL
PSSSAWPLSASGYGRSFSSMAPAPSIAGKLSDIKSTWSSGPASHTQASLSHELWKVPRST
AAPTRPPPGLANPKPSSTWGASPLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGS
TLRTLCLQHGPLVTFHLNLTQGNAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEE
VNRFLAQGQALPPTSSWQSSTGTGQTRLGASGSSHGLVRSDAGHWSAPCLAGKGSSDLLW
GGVPQYSSSLWGPPSSDDGRVIGSPTPLNTLLPGDLLSGESI
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atggctacggggagtgcccagggcaccttcactggacataccaagaagacaaatggcaat
aatggcaccaacggtgcactcgtccaaagcccttctaatcagagtgcccttggagcaggg
ggcgccagcggtaatggaaatggagccagagtgtggggcgtagccacaggctccagctcc
ggcccggctcactgctctctcagcggtggggatggaaaaatggacaacatgatcggagat
gggagaagtcagaattgctggggtgcttccaactccaacgcaggcattaatcttaacctt
aaccctaatgccaacccagccgcctggcctgtacttggacatgaaggaactgtggcgaca
ggcaacccttccagtatttgcagtccggtcagtgccataggtcaaaatacgggcaaccag
aacgggaacccaacaggcactttaggtgcttggggaaacttgctgccgcaagagagcaca
gaaccacaaacatccacttctcagaatgtgtctttcagcgtacaacctcagaaccttaac
actgatggaccaaataacactaaccccatgaactcttcaccaaaccctgtcaatgcaatg
cagaccaacggactgccaaactggggcatggctgtgggtgtgggggccatcgtcccgccc
cacctgcacggccttccgggtgctaacggaccatccgtttctcaaggcagcgggagcggt
ggtgaaggaatcagcagttcggtgtggggactgtccccaggtaaccctgccccaggaagt
ggcaattctgggttcggtcaggggaatggagacactgtgaactcagcattgagtgctaaa
caaaatggatccagcagtgctgtgcagaaggaaggaaacggaggaagcgcctgggactcc
ggccctcctgccggtcctgggctcctcgcctggggacggggcagtggcaacagcagcggc
gtcagtcatatccattcgggagcttggggccaccccagccggagcacctctaacggtgtg
aatggggaatggggcaagcccccaaaccagcattccaacagcgacgtcaatgggaaaggg
tcagcagggtgggacagtccgagtggtagcagccagaatcctgccatgcagcccggcagt
gagcacatgaactcttgggccaaagcggcgacttctggaacgacagccagtgaaggaagt
agcgacggctctggcagtcacaatgaaggaagctctgggagggaaggagcagaaggccga
aggcgagataaagggatgatagaccaagggcacatccaattgccaaggaacgatcttgac
ccaagagttctgtctaatactggttggggacagactccagtaaagcaaaacactgcctgg
gaatttgaagagtcccctaggtctgagagaaaaaatgacaatgggacagaggcctggggc
tgtgccgctactcagccttcaaactcaggggggaagagtgacgggtccatcgtgaacagt
acaaatacctcttcagtgtccgggtgggccagcgcgccgccggctgctgggccagcaagc
acaggctggggagacggcagcagcaaagcgccaagtggcccaggggtttggggggactcg
ataagctctactgctgtcagtaatgctgctgccgccaccaagggtggccatgcttggagt
gggaccgtaaatcaggaggacaagtcgcccacctggggggagcctccgaaacccaaatct
cagaactggggagatggacaaaaatctaatccggcctggagtgcaggagggggagactgg
gccgattcgtcttctgtcctcggacacttgggggatgggaagaaaaatggctctggctgg
gatgctgacggtaaccggtcaggctctggctggaacgatgctcccaggtctgggcccagt
ggctggggtaacggcacaaacacaaaggggaacccagggacaaactggggagagtcttta
aaacctggcccccagcagaactgggcaggcaaaccccaagacaacaatgtgagtaactgg
ggaggagccgcttccgtgaaacagactggaaccgggtggatcggggggccggtccctgtc
acacagaaggacggcagtgaggccacgggctgggaggaaccttctccgccatccattcga
cgcaaaatggaaatcgatgatggtacctcagcttggggtgacccgagcaactacaacaac
aaaactgtaaacatgtgggatagaaacaacccaggcctgcagagcagtgccacggccgcc
gccgccgcagccaccgccaccgcgagcagcagcgcggatgtggccgagacgccgccgccg
cacccggccggcgcccagctcagtcggtcgccgctgctcggcccagtctcagcgggctgg
ggagagatgcctaacgtccactcaaaggccgagagctcctggggagagccgtcctccccg
tctgccctggttgacaacggcactgcagcgtggggcaagccgcccagcagcggcagtgga
tggggggacccccctgcggagccgccagtgacgttcgggagagccagcgcccccgctgcc
gccccagccctgtgcaaaccagcttcaaaatctatgcaagaaggctggggcagtggtggg
gacgacatgaaccttggcgccagtcagtgggaagacgaagaagggggcgtgtggaataat
gctgcttcccaagaaagcgctgcctcctgcagttcctgggggagcgcccccaaaaaagga
ctcccaaagggcatgaaaacgtctggcaagcaggatgaggcctggatcatgagccggctg
atgaaacaactcacagacatgggcttcccgagagagccggctgaagaggccttgaagagc
aacaacatgaatctcgaccaggccatgagcgccctgctggaaaagaaggtggacgtggac
aagcgtggactgggagtgaccgactacaatggagtggtcaccaaagcccttggctgccgc
ccaccagtctccaaagactcttccggggaccgccccacctttctcgacaaggacggcggc
ctagtggaagagcccacgacttcaccgtttttgccttcaccaagcctgaagctccccctt
tcaaacagtgcactccctaatcaggccctgggtgggattgcctcagggctgggcatgcaa
aacttgaattcttctagacagatcccgagtggcaatctgggcatgttcggcagtagcgga
gcagcacaagccaggaccatgcaacagccgccgcagccccccgtgcagcctctgagctcc
tcccagcccagcctccgtgctcaagtgcctccgtttctatcccctcaggttcaagcacag
cttttgcagtttgcagcaaaaaacattggtctcaaccctgcactattgacctcgccaatc
aatcctcagcatatgacgatgttgaaccagctctatcagctgcagctggcgtaccaacgt
ttacaaatccagcagcagatgctacaggctcagcgtaatgtttccggacccatgagacaa
caggagcagcaagtcgcgcgcacaatcacgaacctgcagcagcagatccagcagcaccag
cgccagctggcccaggccctgctcgtgaagccgccgccgccgccgcacctgcctctgcac
ccctctgcaggcaaatcggccatggacagcttccccccgcactcccaggcccccggcctg
cctgacctgcagaccaaagagccgcaggcttcacccagcaccttcgctccttaccctctc
gctggactgaccccaaacatgaatgtcaacagcatggacatgactggtggtttgtcggta
aaggacccgtctcagtcccagtcacgcctccctcagtggacacaccccaacccgatggac
aacttacccggtgctgcttctcccctcgatcagaaccccagcaagcatggtgctatccct
ggaggtctaagcatcgggcctccagcgaagtcctccattgatgactcctatggccggtac
gacttaatcccgaacagtgagtcaccagccagccctcctgtagctgtcccccatagctgg
tcgcgtgccaaatctgacagtgacaaaatctccaacggctccagcatcaactggccccca
gaattccatcctggagttccatggaaaggacttcagaatatagaccccgagaacgacccc
gatgtcactcctggaagtgtccccaccgggcccactatcaataccaccatccaggacgtc
aaccgctacctcctcaagagtgcggggtcctccccaccgtcatctcagagtgccgcgctg
ccttcctcgagtgcctggccgctcagtgcctccggctacggtcgctctttcagcagcatg
gcgcccgcgcccagcattgcaggtaaactgtcagacatcaaatcgacgtggtcctccggc
cctgcctcccacacacaagcctctctgtctcacgagctgtggaaggtgcccagaagcact
gctgcccccacaaggccacctccagggttagccaatcccaagccttcctccacctgggga
gccagtcccctcggctggaccagctcttactcctcgggttctgcctggagcaccgacacc
tcaggacggacaagcagctggctcgttctccgcaacctcacgccccagatcgacggctcc
accctgcggacgctgtgtctgcagcacgggcctctcgtcaccttccacctgaacctgact
caaggcaacgccgtggtccgctacagctccaaggaggaagccgccaaggcccagaagtcc
ctgcacatgtgtgttctgggaaacactaccatcttggccgagtttgccggcgaagaagag
gtgaaccgtttcttagcccaaggccaagcgctgccacccacctccagctggcagtccagc
acggggaccggccagacgcggctgggcgcctcgggcagctcccacggcctggtgcgcagt
gacgctggccactggagtgccccgtgtctggccggcaaaggaagcagtgacctgctgtgg
ggcggggtcccccagtactccagcagcctgtggggcccacccagcagtgacgacggccgg
gtcatcggaagccccaccccgctgaacactctgcttcccggcgaccttctcagtggggaa
tccatctag
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integrated database retrieval system
