Neogale vison (American mink): 122906054
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Entry
122906054 CDS
T08764
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04136
Autophagy - other
nvs04140
Autophagy - animal
nvs05010
Alzheimer disease
nvs05014
Amyotrophic lateral sclerosis
nvs05016
Huntington disease
nvs05017
Spinocerebellar ataxia
nvs05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122906054 (WIPI1)
04136 Autophagy - other
122906054 (WIPI1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122906054 (WIPI1)
05014 Amyotrophic lateral sclerosis
122906054 (WIPI1)
05016 Huntington disease
122906054 (WIPI1)
05017 Spinocerebellar ataxia
122906054 (WIPI1)
05022 Pathways of neurodegeneration - multiple diseases
122906054 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122906054 (WIPI1)
03029 Mitochondrial biogenesis [BR:
nvs03029
]
122906054 (WIPI1)
Membrane trafficking [BR:
nvs04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122906054 (WIPI1)
Mitochondrial biogenesis [BR:
nvs03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122906054 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
WD40_Prp19
WD40
Beta-prop_WDR19_1st
WDR55
Beta-prop_NWD2_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
ANAPC4_WD40
Beta-prop_HPS5
EIF3I
Beta-prop_RSE1_2nd
Beta-prop_IFT140_1st
DUF5711
Beta-prop_WDR35_TULP_N
BCAS3_WD40
Motif
Other DBs
NCBI-GeneID:
122906054
NCBI-ProteinID:
XP_044103506
LinkDB
All DBs
Position
5:11470478..11503141
Genome browser
AA seq
446 aa
AA seq
DB search
MEAEAADGPPGGAEAALSCFSFNQDCTSLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDV
YIVERLFSSSLVVVVSRTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLLVCLEEA
IYIHNIKDMKLLKTILDIPANPTGLCALSINHSNSYVAYPGSLTTGEIVLYDGHSLKTVC
TIAAHEGTLAAITFNASGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVTISSLVF
SMDSQFLCASSNTETVHIFKLEHLTNSRPEEPSTWTGYMGKMFMAASNYLPTQVSDMMNQ
DRAFATGRLNFSGQRNICSLSTIQKLPRLLVASSNGHLYIYNLDPQDGGECVLIKTHSLI
SSGTTEENKENDLRPSLPQSYAATVARPSASTASTVPGYSEDGGALRGEVIPEHEFATGP
VCLDDENEFPPIILCRGSQKGKTKQS
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgaggcggcggacggccccccgggcggggccgaggcggcgctcagctgcttc
tccttcaaccaggactgcacatccctagcgattggaaccaaagctggctataagctgttc
tccttgagttctgtggagcaactggaccaagtccatggaagcaacgagatcccggatgtc
tacatcgtggagcgcctgttctccagcagcctggtcgtggtggtcagccgcacgaagccg
cggcagatgaacgtctatcacttcaagaaaggcacggagatctgtaactacagctactcc
agcaacatcttgtccatacggctgaaccggcagaggctgctggtgtgcctggaggaggcc
atttacattcacaacatcaaggacatgaagctgttgaagaccatcttggatattcctgca
aacccaacaggtctgtgtgccctctctatcaaccattccaattcgtatgtggcctaccct
ggaagcctgactacaggcgagattgtgctttacgatggacactccctgaaaacagtctgc
acgattgctgcccacgaggggacgctggccgccatcaccttcaatgcctcgggctccaaa
ctagcgagcgcctctgaaaagggcacggtcatccgggtgttctccgtaccagacgggcaa
aagctctacgagtttcggagaggcatgaaaaggtacgtgaccatcagctcgctcgtgttc
agcatggactctcagttcctctgtgcctccagcaacaccgagaccgtgcacatcttcaag
ctggagcacctcactaacagccgaccagaagaaccttcgacctggactggctacatgggg
aaaatgttcatggctgcttccaactacctccccacccaggtgtcagacatgatgaaccag
gacagggccttcgccaccggacgtctgaacttctctgggcagaggaacatctgctccctc
tccacgatccagaaactgccgaggctgctggttgcatcgtctaatggacacctttacatc
tacaacttggaccctcaggacggaggagaatgtgtcttaatcaagacccacagcttgatt
agctcaggaacaacggaagaaaataaagaaaatgacctcagaccttcattacctcagtct
tacgcagcaactgtagccagaccaagcgcctcgacggcctccacggtgccaggttattct
gaggacggcggagccctccgaggagaggttattcccgaacatgagtttgccaccggacca
gtgtgtcttgatgacgagaatgaattcccccctataatcttgtgccgtggaagtcagaag
ggcaaaacgaagcagtcttga
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