Neogale vison (American mink): 122906064
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Entry
122906064 CDS
T08764
Symbol
HELZ
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122906064 (HELZ)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
122906064 (HELZ)
3'-5' decay
Other 3'-5' decay factors
122906064 (HELZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
zf-CCCH
UvrD-helicase
AAA_30
ResIII
PhoH
PAM2
zf_CCCH_4
Mov-10_helical
zf-CCCH_4
AAA_22
AAA_7
Bac_DnaA
AAA_16
Mg_chelatase
AAA_5
Motif
Other DBs
NCBI-GeneID:
122906064
NCBI-ProteinID:
XP_044103524
LinkDB
All DBs
Position
5:complement(13216938..13379771)
Genome browser
AA seq
1945 aa
AA seq
DB search
MEDRRAEKSCEQACESLKRQDYEMTLKHCTEALLSLGQYSMADFPGPCPLEIESIKIESL
LYRIASFLQLKNYGQADEDCRHVLGEGLAKGDGAFQAVLCCMQLKGKLQLVSSILAKSLT
GESLNGMVTKDLTRLKTLLTETETATSNVLSGYHVEDLEGGSCNGWHFRPPPRGITSSEE
YTLCKRFLEQGICRYGAQCTSAHSQEELAEWQKRYASRLIKLKQQNENKQLSGSYMETLI
EKWMNSLSPEKVLSECIEGVKVEHNPDLSVTVNTKKSHQTWTFALTCKPARMLYRVALLY
DAHRPHFSIIAISAGDSTTQVSQEVPENCQEWIGGKMAQNGLDHYVYKVGIAFNTEIFGT
FRQTIVFDFGLEPVLMQRVMIDAASTEDLEYLMHAKQQLVTTAKRWDSSSKTIIDFEPNE
TTDLEKSLLIRYQIPLSADQLFTQSVLDKSLTKTNYQSRLHDLLYIEEIAQYKEVSKFNL
KVQLQILASFMLTGVSGGAKYAQNGQLFGRFKLTETLSEDTLAGRLVMTKVNAVYLLPVP
KEKLVQTQGTKEKVYEATIEEKTKEYIFLRISRECCEELNLRPDYDTQVELQFQLNRLPL
CEMHYALDRIKDNGVLFPDTTMTPTIPWSPNRQWDEQLDPRLNAKQKEAVLAITTPLSIQ
LPPVLIIGPYGTGKTFTLAQAVKHILQQQETSRILICTHSNSAADLYIKDYLHPYVEAGN
PQARPLRVYFRNRWVKTVHPVVHQYCLISSAHSTFQMPQKEDILKHRVVVVTLNTSQYLC
QLDLEPGFFTHILLDEAAQAMECETIMPLALATKNTRIVLAGDHMQLSPFVYSEFARERN
LHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIINYTSELFYEGKLMASGKQPAHKDFYP
LTFFTARGEDVQEKNSTAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQ
VFRIRAELRKKRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDS
TEDLDYGFLSNYKLLNTAITRAQSLVAVVGDPIALCSIGRCRKFWERFIALCHENNSLHG
ITFEQIKAQLEALELKKTYVLNPLAPEFIPRALRLQHSGNTNKLQQSPPKGKNLHHTQND
HFQNDGIVQPNPSVLIGNPIRAYTPPPPLGPHPNLGKSPSPVQRIDPHTGTSILYVPAVY
GGNVVMSVPLPVPWTGYQGRFAVDPRILTHQAAMAYNMNLLQTHGRGSPIPYGLGHHPPV
SIGQPQNQHPEKEQHEPSRNGKSDTNNPGPEINKIRTPEKKPTESKQIDLESNPQNRSPE
SRPGVVYPNTKFHRKDNLNPRHINLPLPAPHAQYAIPSRHFHPLPQLPRPPFPIPQQHAL
LNQQQSNLPEQPNQMPPQPNQVVPPPNPLNQLTPQPPPQLSPAYQAGPNSAFFNSAVSHR
PQSPPAEAVIPEQQPPPMLQEGHGPLRAIAQPGPLLPSHLSNFTDENPPGLPVGEALDRM
HGSVALETLRQQQVRFQQWNEHQAYLGQGSIPYPHHHRPHPHLQHLPQTPIGLHQPPVRA
EWKLPGSAEDEAETTDTRFQDLIRELSNRDQSETRELAEMPPPQSRLLQYRQIQTRSPPA
VPSPPSSTDHSSHFSNFNDNSRDIEVANNPAFPQRLPPQIFSSPFSLPSEHLAPPPLKYL
APDGAWTFANLQQNHLMGPGFPYGLPPLPHRPPQNPFVQIQNHQHAIGQEPFHPLSSRTV
SSSSLPSLEEYEPRGPGRPLYQRRISSSSVQPCSEEVSTPQDSLAQCKELQDHNNQSSFN
FSSPESWVNTTSSTPYQNIPCNGSSRTAQPRELIVPPKTVKPPEDQLKSENLEVSSSFNY
NVLQHLGQFPPLMPNKQIVESANSSSQQSSGGSKPAMSYASALRAPPKPRPQPEQAKKSS
DPLSLFQELSLGSSSGSNGFYSYFK
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atggaagacagaagagctgagaagtcatgtgaacaagcgtgtgaatcacttaagaggcag
gactatgaaatgaccctcaagcactgcacagaggccctcctttctcttggccagtactcc
atggccgacttcccagggccatgtccactggagatagaaagcatcaaaattgagagtctt
ctttatagaattgcctcatttttgcaactgaaaaactatgggcaagctgatgaagattgt
aggcatgtgctgggagaaggcctggccaagggagatggggcctttcaggcagtgctctgc
tgtatgcagctgaaaggaaagcttcaactggtatccagcattcttgccaagtcactgaca
ggagagtccctgaatgggatggtaacaaaagatttgacaagactaaaaacacttctcaca
gaaacagagacagccactagtaacgtcctgtctggatatcacgtggaagacttggaaggg
ggatcttgtaatggttggcatttccgcccaccacctaggggaatcacaagcagcgaggaa
tatactttgtgtaaaagatttttagagcaaggaatctgtaggtatggtgcgcagtgtact
tcagcacattcccaggaagaactagcagaatggcagaaaagatatgcttcacgcttgata
aaattgaaacagcaaaatgagaataaacagctctcaggcagttacatggaaaccttgata
gaaaagtggatgaattcattatctcctgagaaagtgcttagtgaatgtatagaaggagta
aaagtagagcataatcctgatctgtcggtcactgtcaacaccaaaaagtctcaccagaca
tggacctttgctcttacttgtaagcctgcaagaatgctgtatcgtgtagcattgctttat
gatgctcatcgtcctcattttagtatcattgcaatatctgccggagatagtactacccag
gtatcacaagaagtcccagaaaactgtcaagaatggataggaggaaagatggcccaaaat
ggattagatcattacgtgtataaagtcgggatagcatttaacacagaaatatttggaact
tttcgccaaaccatagttttcgactttggattggaaccagtactcatgcaaagagtaatg
attgatgcagcttctacagaagatcttgaatacctgatgcatgcaaaacaacagctagta
accacagctaagcgttgggattcttcttctaagactattatagatttcgaacccaatgaa
actactgatttggagaagagccttcttatcagataccaaattcctctctctgctgaccag
ctgttcacccagtccgttttagacaaatcgttgaccaagaccaactatcagtcacggctg
catgaccttctttatattgaggagatagcccagtataaagaagtcagcaagttcaacctt
aaagtgcagttgcagattctagcaagtttcatgctcactggagtttctggaggtgcaaag
tatgctcagaatggacaactttttggtcgctttaagcttactgaaacactttctgaagat
actttggctggacggctggtgatgaccaaagtcaatgctgtttatttattaccagtccct
aaagagaagttagtacagacccagggaaccaaagagaaggtttatgaagctactattgaa
gaaaaaacaaaagaatatatatttttaaggatatccagggaatgctgtgaagaacttaat
cttcggcctgattatgacacacaggttgaacttcagtttcaattaaatcgattacccctc
tgtgaaatgcattatgcgctagacaggatcaaggacaatggggttttgtttccagacacc
actatgactccaaccataccttggagtcctaacagacaatgggatgagcagttggatcct
cggctaaatgcaaaacagaaagaggctgtcctggccattacaactccactttcaatacag
ctgcctcctgttctcatcattggaccctatgggacaggcaaaacattcactctagctcag
gctgtcaagcacatactccagcagcaggagacgagcaggatcctcatttgcacccattct
aatagtgctgctgacctctacataaaggattatttacatccatatgtagaagcaggcaat
ccccaggcaagacctctcagggtatatttcagaaatcgctgggtaaagactgtccaccca
gttgtgcatcagtactgtttgatctcaagcgcacattccacctttcagatgccacagaaa
gaagatattcttaaacaccgagtggttgttgttacattgaatacttcccagtacctctgt
cagttggaccttgaacctgggttttttacacacattctattagatgaagctgcccaggcc
atggagtgtgaaaccattatgcctctagcattagcaactaaaaacactcggattgtcttg
gctggtgaccacatgcagctcagtccttttgtttacagcgagtttgccagggagagaaac
cttcatgtttcattacttgatcgactctatgagcattaccctgctgagtttccatgtagg
atcctcctctgtgagaactaccgctcccatgaagctatcatcaattacacctctgagctc
ttctatgagggcaaattgatggccagtggaaagcaaccagcacacaaggatttctaccca
ctaactttctttacagcacgaggggaagatgtacaagaaaaaaatagcacagctttttat
aataatgcagaggtattcgaagtggtggaacgtgtggaagagttgagaaggaagtggcca
gtagcgtgggggaagttggatgacggcagtattggtgtggtcactccgtatgctgatcaa
gtgttcaggatacgtgctgaacttcgaaaaaagagattatccgatgttaatgtagaaagg
gtgctaaatgttcaaggaaaacagttcagagttttgtttcttagcacagtgcgtacaagg
catacttgtaaacacaaacagacaccgataaagaagaaagagcagctgctggaagattcc
acggaggatttagattatggttttctctctaactacaaacttctcaataccgccatcaca
agagcacaatccctggttgctgtggtgggcgatcccattgctctgtgctctattggaaga
tgcaggaaattttgggaacggtttattgccctgtgtcatgaaaataatagcctacacgga
atcacttttgaacagatcaaagctcagctagaggctttagaactcaagaagacgtatgtg
ttgaatccactggcacctgaatttatcccccgggctctacgactgcagcattcaggaaat
accaacaaactgcagcagtcaccccccaaggggaaaaacctccatcatacccagaatgat
catttccagaacgatggaattgttcagcccaatccttctgtacttattggcaatcctatt
agagcatatactcctccaccccctcttggacctcatccaaatttggggaaatctccaagc
cctgttcaaagaatagatcctcacactgggacaagtattctttacgtacctgctgtctat
ggagggaatgtagttatgtcggtgcctttacctgtaccatggacagggtaccagggcaga
tttgcagtcgatcctcggatccttacgcaccaggcagcaatggcctacaatatgaacctc
ttacagacacacggacgggggtctcccataccgtatggccttgggcaccacccacccgtc
agcatagggcagccgcaaaaccagcatccggagaaggagcaacatgagccaagtcgaaat
ggtaaaagtgatacaaataatcctggacctgaaattaataagattcgaacaccagagaaa
aagcctacagaatcaaaacagattgatttggaatccaatccacagaacagaagtcctgag
tcgcgtcctggtgtggtttatcccaataccaaatttcatcgcaaagataatctcaaccca
agacacataaatcttcctctcccggctccccatgcacagtatgccatccccagtcgtcat
tttcatccccttccccagctgcccagaccaccgtttccgattccacagcagcacgccctg
ttaaatcagcagcagagtaatttgcctgaacaaccaaatcagatgccaccccagccaaat
caggtagtcccgccgccgaatccgctgaaccagctgactccgcagccgccgcctcagctt
tctcctgcctatcaggcaggacccaacagcgctttctttaatagcgccgtgtctcaccgc
ccgcagtccccacccgcagaggctgtgatccccgagcagcagccgcctcccatgctgcag
gaaggccatggtcctctgcgagccatcgcacagcccggccccctccttccgtcacatctg
agtaacttcactgatgagaaccccccgggattgcctgtaggggaggctttagatcgtatg
cacgggagcgtagctctagaaacactaaggcagcagcaagtgcggttccagcagtggaac
gagcatcaggcctatctcggtcagggcagtattccgtacccgcaccatcaccgcccgcat
cctcacctccagcaccttcctcagacgcccattggattgcatcagcccccagtgagagca
gagtggaagctccctggcagtgccgaagatgaagcagaaaccacagacaccaggtttcaa
gacttaatcagagaactgtctaatcgtgatcaaagtgaaacacgggaactagctgaaatg
ccaccacctcaatcaagacttttgcaatatagacaaattcagactaggagcccaccagca
gtcccatctcccccatccagcacagaccacagtagccacttttctaactttaatgacaac
agcagagacattgaagtagccaacaacccagcatttccacagcgcctaccgccccagata
ttcagctcgcctttctcgttgccatctgaacaccttgcccctcctcccttgaaatacctg
gcacctgacggagcatggacttttgctaacttacaacagaatcacctaatggggccgggt
tttccctatggcctacctccattgccgcacaggccaccgcaaaacccttttgtacaaata
cagaatcatcaacatgctattggtcaagagccatttcacccattgtcatctcgaacagta
tcttcttcttcgctccctagcttagaagagtatgaacccagaggacctggtcggcccttg
taccaaagaagaatctcatctagctcagtccagccttgttctgaagaagtaagcactcct
caagacagtcttgctcagtgtaaagagcttcaggaccataataaccaatcttctttcaac
ttttcatccccggagtcctgggtaaacaccacctcatctaccccctatcagaacattccg
tgtaatggatccagcaggacagctcagcccagagagttgatcgttccacccaagaccgtc
aaaccccctgaggatcagctgaagtctgagaacctcgaggtgtccagttccttcaactat
aatgtgctgcagcatctcggccagttcccccctctcatgcccaacaagcagatcgtggag
tcggccaacagcagtagccagcagagctctgggggcagcaagcccgccatgtcttatgcc
agtgctttgcgggcccctcccaagcccaggccccagcccgagcaggccaagaagagtagc
gaccctctgtctctgttccaggaacttagcctggggagctcatcaggcagcaatggcttt
tactcctattttaaataa
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