Neogale vison (American mink): 122906074
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Entry
122906074 CDS
T08764
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03040
Spliceosome
nvs05202
Transcriptional misregulation in cancer
nvs05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122906074 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
122906074 (DDX5)
05205 Proteoglycans in cancer
122906074 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122906074 (DDX5)
03009 Ribosome biogenesis [BR:
nvs03009
]
122906074 (DDX5)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122906074 (DDX5)
Spliceosome [BR:
nvs03041
]
Complex A
U1 snRNP components
U1 related factors
122906074 (DDX5)
Complex B
122906074 (DDX5)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
Pre-60S particles
Helicases
122906074 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
122906074
NCBI-ProteinID:
XP_044103558
UniProt:
A0A8C7A9H7
LinkDB
All DBs
Position
5:14287159..14293816
Genome browser
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgcggccgggatcgagggtttggtgcacctcgg
tttgggggaagtagggcagggcccctgtctggaaagaaatttggaaaccctggggagaaa
ctagttaaaaagaagtggaatctcgatgagctgcccaaatttgagaagaatttttatcaa
gaacaccctgatttggctaggcgcacagcacaagaggtggagacatacagaaggagtaag
gaaattacggttagaggtcacaactgcccaaagccagttctgaatttttatgaagcaaac
ttccctgcaaatgtcatggatgtaattgcaagacagaattttactgaacccactgctatt
caggctcagggatggcccgttgctctaagtggattggatatggttggagtagcacagact
ggatctgggaaaacattgtcttatttgctgcctgctatcgtccacatcaatcatcagcca
ttcctagagagaggtgatgggcctatttgtttggtgctggcaccaactcgggaactggcc
caacaggtacagcaagtagctgctgaatactgtagagcgtgtcgattgaagtccacttgc
atctatggtggtgctcccaagggaccacagattcgtgatttggagagaggtgtggaaatt
tgtattgcaacacctggaagactgattgacttcttagagtgtgggaaaaccaatctgaga
agaactacctaccttgttcttgatgaagcagatagaatgcttgatatgggctttgaaccc
caaataaggaagattgtggatcaaataagacctgataggcaaaccctaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagattttctgaaggactacattcatata
aacattggggcactagaactgagtgcaaaccacaacattcttcagattgtggatgtatgt
catgatgtagaaaaggatgaaaaacttattcgtctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaagatgtgatgagcttactagaaaa
atgaggagagatgggtggcccgccatgggtatccatggtgacaagagtcaacaggagcgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatctctgtgctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgtcgggacagatactctgcgggc
aaaaggggtggatttaatacttttagagacagggaaaattatgacagaggttactctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaacggttacgatagcactcagcaatatggaagtaac
gttccaaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgcagct
gcgcctatgattggttatccaatgccaacaggatattctcaataa
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