Neogale vison (American mink): 122906286
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Entry
122906286 CDS
T08764
Symbol
CASC3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03013
Nucleocytoplasmic transport
nvs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122906286 (CASC3)
03015 mRNA surveillance pathway
122906286 (CASC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122906286 (CASC3)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
122906286 (CASC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
122906286
NCBI-ProteinID:
XP_044103982
UniProt:
A0A8C7A8V5
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Position
5:complement(22042294..22063219)
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AA seq
701 aa
AA seq
DB search
MADRRRQRASQDTEDEESGASGSDSGGSPARGGGSCSGSAGGGGSGSLPSQRGGRAGALH
LRRVESGGAKSAEESECESEDGIEGDAVLSDYESAEDSEGEEGEYSEEENSKVELKSEAN
DAANSSAKEEKGEEKPDTKGTVTGERQSGDGQESTEPVENKVGKKGPKHLDDDEDRKNPA
YIPRKGLFFEHDLRGQTQEEEVRPKGRQRKLWKDEGRWEHDKFREDEQAPKSRQELIALY
GYDIRSAHDPDDIKPRRIRKPRFGSPPQRDPNWIVERPNKSHRHQGPGGTLPPRTFINRN
AAGTGRMSTPRNYSRSGGFKEGRAGFRPMEAGGQHGGRSGETVKHEGSYRSRRLEQTPAR
DPSPEADAQVLGSPEKEEATSEIPAAAPDTVPPAPDRPVEKKSYSRARRTRIKAGDAVKI
AEEVPPPPEGLNPAPQVPETTPPPPAKTGNWEAPVDSTTSGLEQDVAQLNITEQNWSPGQ
PSFLQPRELRGMPNHIHMGAGPQFNRMEEMGVQGGRAKRYSSQRQRPVPEPPAPPVHISI
MEGHYYDPLQFQGPIYTHGDSPAPLPPQGMIVQPEMHLPHPGLHPHQTAAPLPNPGLYPP
PVSMSPGQPPPQQLLAPTYFSAPGVMNFGNPSYPYAPGALPPPPPPHLYPNTQAPSQVYG
GVTYYNPAQQQVQPKPSPPRRTPQPVTIKPPPPEVVSRGSS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcggcggcggcagcgggcttcgcaggacacggaggacgaggagtctggtgct
tcgggctcggacagcggcggctccccggcgcggggcggcgggagctgcagcggtagtgct
ggaggcggtggcagcggctctctgccttcccagcgcggaggccgagcgggggcccttcat
ctgcggcgggtggagagcgggggcgccaagagcgctgaggagtcggaatgtgagagtgaa
gatggcatcgagggcgatgctgtgctgtcggattatgaaagtgcagaagactctgaaggt
gaagaaggggaatatagtgaagaggaaaactccaaagtggagctgaaatcagaagccaat
gatgccgctaattcttcagcaaaagaagagaaaggagaggaaaagcccgacactaaaggc
actgtgactggagagaggcagagcggggatggacaggagagcacagaacctgtggagaac
aaagtgggtaaaaagggccctaagcatttggatgatgatgaagaccggaagaacccagca
tacataccccggaaagggcttttctttgagcatgatcttcgaggacaaacacaggaggag
gaagtcagacccaaggggcgtcagcgaaagctctggaaggatgagggtcgctgggaacat
gacaagttccgggaagatgaacaagctccaaagtcccgacaggagctcattgccctttat
ggctatgatatccgctcagctcacgatcccgatgacatcaaaccccgaagaatccggaag
cctaggtttgggagtcctccgcaaagagatccaaactggattgttgagcgaccaaacaag
tcccatcgccatcagggtcctgggggcaccctaccaccaaggacatttatcaataggaat
gctgcagggactggccgaatgtctactcccaggaattactctcgatctgggggcttcaag
gaaggccgtgctggttttaggcctatggaggctggtgggcagcatggtggtcggtctggt
gagactgttaaacatgaaggcagttaccgatcacggcgcctagagcagactcctgcgcgg
gacccatctccagaagctgatgctcaggtgcttggcagtcccgagaaggaagaggcgacc
tcagagataccagctgctgctccggacactgtaccaccagcccctgacaggcctgttgag
aagaaatcctactccagggcaagaagaaccagaatcaaagctggagatgcagtcaagatt
gcagaagaggtgccccctccacccgaagggctaaacccagcacctcaagtcccagaaacg
acccctcctccacctgctaagactggaaactgggaggctccagtggattcaacaacaagt
ggacttgagcaagacgtggcacaactaaatataacagaacagaattggagtcccgggcag
ccttcattcctgcaaccacgtgagcttcgtggtatgcccaaccacatacatatgggagca
ggacctcagtttaaccggatggaagaaatgggtgtccagggtgggcgagccaaacgctat
tcatctcagcggcaaagacctgtgccagagccccctgctcctcctgtgcacatcagtatc
atggagggacattactatgatccattgcagttccagggaccaatctatacccatggtgac
agccctgccccactgcctccccagggcatgattgtgcagccagaaatgcaccttccccac
ccaggtttacatccccaccagactgcggcacctctgcccaatccaggcctctatccccca
ccagtgtccatgtctccagggcagccaccacctcagcagttgcttgctcctacttacttt
tctgctccaggcgtcatgaactttggtaatcccagttacccttatgctccaggggcactg
cctcccccaccgccacctcatctgtatcctaatacgcaggccccatcacaggtatatgga
ggagtgacatactataaccccgcccagcagcaggtgcagccaaagccctccccaccacgg
aggactcctcagccagtcaccatcaagcccccaccacctgaggttgtaagcaggggttcc
agttaa
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