Neogale vison (American mink): 122906347
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Entry
122906347 CDS
T08764
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122906347 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvs03041
]
122906347 (PRPF8)
Spliceosome [BR:
nvs03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122906347 (PRPF8)
Complex C
U5 SnRNP specific factors
122906347 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
122906347
NCBI-ProteinID:
XP_044104111
UniProt:
A0A8C7ASF9
LinkDB
All DBs
Position
5:25706630..25742630
Genome browser
AA seq
2335 aa
AA seq
DB search
MAGVFPYRGPGNPVPGPLAPLPDYMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKED
MPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLY
HITGAISFVNEIPWVIEPVYISQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYAD
NILDVEPLEAIQLELDPEEDAPVLDWFYDHQPLRDSRKYVNGSTYQRWQFTLPMMSTLYR
LANQLLTDLVDDNYFYLFDLKAFFTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDIN
KIIIRQPIRTEYKIAFPYLYNNLPHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPIS
HRHSVKSQEPLPDDDEEFELPEFVEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRR
ALDIPLVKNWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATK
FFQSTKLDWVEVGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRF
GNAFHLCREVLRLTKLVVDSHVQYRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMR
QIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAAGWRVWLFFMRGITPLLERWLGNLLARQF
EGRHSKGVAKTVTKQRVESHFDLELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCW
KANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLT
RLYLKAEQERQHNYLKDGPYITAEEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLI
LALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMD
LYSHLVPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGIN
NLQDVWETSEGECNVMLESRFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYK
DMNHTNSYGIIRGLQFASFIVQYYGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATE
AAHPIRLFCRYIDRIHIFFRFTADEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARM
RLMKHDVNLGRAVFWDIKNRLPRSVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKC
RTSYEEFTHKDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIV
NKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPK
ELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFI
DSQRVWAEYALKRQEAIAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRT
DFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEG
LFWEKASGFEESMKWKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGI
FMHGKIPTLKISLIQIFRAHLWQKIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSY
KMNSSCADILLFASYKWNVSRPSLLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYA
RAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPAL
YVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTT
KPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQ
IIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLY
DDWLKTISSYTAFSRLILILRALHVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVE
VQLKDLILADYGKKNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLT
ATQTRTVNKHGDEIITSTTSNYETQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKET
GYTYILPKNVLKKFICISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLP
GQLPQHEYLKEMEPLGWIHTQPNESPQLSPQDVTTHAKIMADNPSWDGEKTIIITCSFTP
GSCTLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWN
YNFMGVRHDPNMKYELQLANPKEFYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
7008 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtatttccttaccgagggccgggtaacccggtgcccggccctctagcgcca
ttgccagattacatgtcggaggagaagctgcaagagaaagcccgaaaatggcagcaatta
caggccaagcgctatgcggaaaaacggaagtttggatttgtggatgctcagaaggaagac
atgcccccagaacatgttaggaagatcattcgagaccatggagacatgaccaacaggaag
tttcgccatgacaaaagggtctacttgggtgccctcaagtacatgccccatgcagtcctc
aaactcctggagaacatgcctatgccttgggagcagattcgggatgtgcctgtgctgtac
cacatcactggagccatttcttttgttaatgagattccctgggtcattgaacctgtctac
atctctcagtgggggtcaatgtggattatgatgcgtcgagaaaaaagagacaggaggcat
ttcaagaggatgcgtttccccccttttgatgatgaggagccacctttggactatgctgac
aacatcctagatgttgaaccactggaggccattcagctagagctggaccctgaggaggat
gcccctgtgttggactggttctatgaccaccagccattgagggacagccggaagtatgtg
aatggctctacttaccagcgctggcagttcacgctgcccatgatgtctacgctctaccgc
ctggccaatcagctcctgacagacttggtagatgataactacttctatctgtttgatctg
aaggccttctttacctccaaagcactcaatatggctattcctggaggccccaaatttgaa
cctcttgttcgagacatcaatctccaggatgaagattggaatgagttcaacgatattaac
aagatcatcatccggcagcctatccgcactgaatacaagattgcttttccttacctgtac
aacaaccttccacaccatgtccacctcacctggtaccacactcctaatgttgtgttcatc
aaaactgaggatcctgatctcccagctttctactttgatcctttgatcaacccaatttct
cacaggcactctgtcaagagccaggaaccgttgcctgatgatgatgaggagtttgagctc
ccagagtttgtggagcccttcctgaaagacacacccctctacacagacaatacagccaat
ggtattgctctgctctgggcccctcggcctttcaacttacgctctggtcgcacccgccgc
gccctggacatccctcttgtcaagaactggtatcgggagcattgtcctgccggacagcct
gtgaaagtgagagtttcctaccagaaactgctgaagtactatgtgctgaacgctctgaag
caccggcctcctaaagcccaaaagaagaggtacctgtttcgctccttcaaagccaccaaa
ttcttccagtccacgaagctggactgggtggaggtggggctgcaggtgtgccgccagggc
tacaacatgctcaaccttctcattcaccggaaaaacctcaactatctgcacctggattac
aacttcaatcttaaacctgtcaagaccctcaccaccaaggaaagaaagaaatctcgtttc
ggaaatgctttccatctgtgccgagaagttctgcgtttaaccaagctggtggtggatagt
cacgtgcagtatcgattgggcaatgtggatgccttccagctggcagatggcttgcagtat
atctttgctcacgtggggcagctgacgggcatgtaccggtacaaatacaagctgatgcgg
cagattcgcatgtgcaaggacctgaagcatctcatctattaccgcttcaacacgggccct
gtagggaagggccctggctgtggcttctgggctgctggctggcgggtctggctgtttttc
atgcgtggcatcacccctttgctggagcggtggctgggcaacctcctggcccgacagttc
gaaggtcgacactctaagggggtggcaaagactgttacaaagcagcgagtggagtcgcat
tttgaccttgagcttcgggcagctgtgatgcatgacattctggacatgatgcctgaggga
atcaaacagaataaggcccggacgatcctgcagcatctcagtgaagcctggcgctgctgg
aaagctaacattccctggaaggtacctgggctgccaacacctatagagaatatgatcctt
cgatatgtgaaggccaaggctgattggtggaccaacactgcccactacaaccgagaacgg
atccgccgtggagctactgtggacaagactgtttgcaaaaagaacctgggccgcctcact
cggctctatctgaaggcagaacaggagcgacagcacaactacctgaaggatgggccatat
atcacagcagaggaagcagtggcagtgtataccaccactgtgcattggttggagagccgg
aggttctcacccatcccattccccccactctcatacaagcatgacaccaagttgctcatc
ttggcgttggagcggctcaaggaagcttacagtgtgaagtctcggttaaaccagtctcag
agagaggagctaggtctgatcgagcaagcctatgacaacccccacgaggcattgtcccgc
atcaagcgtcacctcctcacacagagagcctttaaagaagtgggcattgagttcatggat
ctctacagccacctggtgcccgtatatgacgtggagccgctggagaagatcactgatgcc
tacctagaccagtacctttggtatgaagccgacaagcgccgccttttcccgccctggatc
aagcctgctgacacagaaccacctcctctgcttgtttacaagtggtgccaaggcatcaat
aatctgcaggatgtgtgggagacaagtgagggtgagtgcaatgtcatgctggaatcacgc
tttgagaagatgtatgaaaagatcgacttgaccctgcttaatagactgctgcgactcatt
gtagaccacaacatagctgattacatgacagccaagaacaacgttgtcatcaactataag
gacatgaaccatacaaattcctacgggatcattagaggcctgcagtttgcctcattcatc
gtgcaatactatggcttggtgatggatttgctggtgctaggactgcaccgggccagtgag
atggctgggccccctcagatgccaaatgacttcctcagtttccaggacatagccacggag
gctgcccaccccatccgtctcttctgtagatacatcgatcgtatccacattttctttagg
ttcacagcagatgaggctcgggacttgatccagcgttacctgacagagcatcctgacccc
aacaacgaaaatatcgttggctataataacaagaagtgctggccccgagatgcccgcatg
cgcctcatgaagcatgatgtcaacttgggtcgagcagtgttctgggacatcaagaaccgt
ctgccacggtcagtgactacagttcagtgggagaacagctttgtgtctgtgtacagtaag
gacaaccccaacctactgttcaacatgtgtggctttgagtgccgcatcttacctaaatgc
cgcaccagctatgaggagttcacccacaaggatggggtctggaacctacagaatgaggtt
actaaggagcggacagctcagtgtttcttgcgtgtggatgatgagtcaatgcagcgcttc
cacaaccgtgtgcgtcaaattctgatggcctctggctccacgaccttcaccaagattgtg
aataagtggaacacagctcttataggccttatgacatactttcgggaggctgtggtgaac
acccaggagctcctggacttgctagtgaagtgtgagaacaagatccaaacacgtatcaag
attggcctcaactccaagatgcctagtcggttccctcctgttgtgttctatacccctaag
gagttgggtggactcggcatgctctcaatgggccatgtgctcatcccccagtctgacctc
aggtggtccaagcagacagatgtaggtatcacacactttcgttcaggaatgagccatgaa
gaagaccagctaattcccaacttgtatcgctacatacagccgtgggagagtgagttcatt
gattcccagcgggtctgggcggagtatgcactgaagagacaagaggccattgctcagaac
agacgactgaccttagaagatttagaagattcatgggatcgtggcattccccgaatcaac
accctcttccagaaggacaggcacacgttggcatatgataagggctggcgggttcgaact
gactttaagcagtaccaggtcttgaagcagaaccctttctggtggacacatcagcggcat
gatgggaagctctggaacctgaacaactaccgtacagacatgattcaggccttgggtggt
gtggaaggtattctggaacacacactcttcaagggcacttacttccctacgtgggaaggg
cttttctgggaaaaggccagtggttttgaggagtctatgaagtggaagaagctaactaat
gctcagcgatcaggattgaaccaaattcccaatcgtagattcaccctctggtggtcccca
accatcaaccgagccaacgtatatgtaggctttcaggtgcagctggacctgacgggtatc
ttcatgcatggcaagatccccacactgaagatctctcttatccagattttccgggctcac
ttatggcagaagatccatgagagcattgtgatggacttgtgtcaggtgttcgatcaggaa
ctggatgcactagaaattgagacagtgcaaaaggagacaattcacccacggaagtcctat
aaaatgaattcttcctgtgcagatatcctgctctttgcctcctataagtggaacgtgtct
cggccctcattgctagcagactctaaggatgtgatggatagtaccaccactcagaagtat
tggattgatatccagttgcgctggggggactatgattcccatgacattgaacgctacgcc
cgggccaagttcctggactacaccacagacaacatgagtatttacccttcgcccactggt
gtgctcattgccattgacctggcatacaatctgcacagtgcctacggaaactggttccca
ggcagcaagcctctcatacagcaggccatggccaagatcatgaaggcaaaccctgccttg
tacgtgttacgtgaacggatccgcaaggggctgcagctctattcatctgagcccactgag
ccctatctgtcctctcagaattatggtgagctcttctccaaccagatcatctggtttgtg
gatgacactaatgtctacagagtgactatccacaagacctttgaagggaacttgaccacc
aaacccatcaatggggccatcttcatcttcaatccacgcacagggcagctcttcctcaag
ataatccacacgtctgtgtgggctggacagaagcgtttggggcagttggctaaatggaag
acagctgaggaagtggctgccctcatccgatctctgccagtggaggagcagcccaagcag
atcattgtcaccaggaagggcatgctggacccattggaggtgcacttgctggactttccc
aatattgtgatcaagggatcagagctccagctacctttccaggcctgtctcaaggtggaa
aagtttggggacctcatccttaaagccactgaaccccagatggttctctttaatctctac
gatgactggctcaagactatctcatcctacacggctttttcccgtctcatcctgattctg
cgtgccctgcatgtgaacaatgaccgggcgaaggtgatcctgaagccagacaagactact
attacagaaccacaccacatctggcccactctgactgacgaggagtggatcaaagtggag
gtgcagctaaaagatctcatcttggctgattatggcaagaaaaacaatgtgaatgtggca
tcgctgacacaatcagaaattcgagacatcatcctgggtatggagatctcggcaccatca
cagcagcggcagcagatagcggagattgagaagcagaccaaggaacagtcacagctgaca
gcaacacagactcgtactgtcaacaagcatggcgatgagatcattacttctaccaccagc
aactatgagacccagactttctcctccaagactgaatggagggttagagccatctctgct
gccaaccttcacctgaggaccaatcatatttatgtttcatctgatgacatcaaggagacc
ggttatacctatatccttcccaaaaatgtgcttaagaagtttatctgcatatctgacctt
cgggcccagattgcaggatacctgtatggagtgagcccaccagataacccccaggtgaag
gagatccgctgcatcgtaatggtaccacagtggggcactcaccagaccgtgcacctgcct
ggccagctgccccagcatgagtacctcaaggagatggaacccttaggatggatccacact
cagcccaatgaatccccccagctgtcaccccaggatgtcactacccatgctaagatcatg
gctgacaacccatcttgggatggtgaaaagaccattattatcacctgcagcttcacacca
ggctcctgcacactgaccgcctataagctgacccccagtggctatgaatggggccgccag
aacacagacaagggcaacaatcccaagggctatctaccctcacattatgaaagggtccag
atgctgctgtcagaccgtttccttggcttttttatggttcctgcccagtcctcatggaac
tacaactttatgggtgtccggcatgatcccaacatgaagtatgagctgcagctggcaaat
cctaaagagttctaccacgaggtgcacaggccttcccacttcctcaacttcgcactcctg
caagagggcgaggtctactctgcagaccgagaggacctctatgcctag
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integrated database retrieval system
