Neogale vison (American mink): 122906348
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Entry
122906348 CDS
T08764
Symbol
SCARF1
Name
(RefSeq) scavenger receptor class F member 1 isoform X1
KO
K24318
scavenger receptor class F member 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122906348 (SCARF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122906348 (SCARF1)
Membrane trafficking [BR:
nvs04131
]
Endocytosis
Phagocytosis
Scavenger receptors
122906348 (SCARF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_2
EGF_Teneurin
EGF_PEAR1L
Motif
Other DBs
NCBI-GeneID:
122906348
NCBI-ProteinID:
XP_044104112
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All DBs
Position
5:25747171..25759060
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AA seq
867 aa
AA seq
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MAARPFTLVSSGKALEGSREGVGSCGGQTNPNPLAERAAMGLRLLLLLLLWTQGTQESKL
DPNGQHVCLASSPSADIQCCPGWRQKDQECTIPICEGLDACREDEVCVKPGLCRCKPGFF
GAQCNSRCPGQYWGPDCREICACHPHGQCEPATGVCHCQADRWGGRCEFACACGPHGRCD
PATGACRCEPGWWSSTCRRPCQCNPAAARCDQADGSCRCEPGWWGRRCSFRCACHGSPCA
QETGRCVCRPGWWGPECRQQCECVRGRCSAASGQCACPPGFRGARCELPCRAGSYGPHCR
DSCGHCKHKEPCSVDTGSCESCEPGWNGTQCHQPCPPGTFGESCGQLCPHCRLGEACQPD
TGHCQHCDPGWLGPRCEDPCPTGTYGEGCSSACHTCVQGTCDAVTGECICHAGYWGPSCN
TSCPPGFHGNNCSVPCECPEGPCNPVSGACQLGHHSQDAALIAGILVPLLLLLLGLIFCA
CCCWAARLDPKDRPASDGAAVSRMKLQVWGALSSLGSALPCGSFSSHKLPWVTVSHHDPE
IPFNHSFIEPPSAGWASDDSFSSDPESGEDESPAYCVPPQEGMVTVAHGEFVEASLAGGP
VPPPEDASTPFPIPRTSSLARAKRPSVSFAEGTKFAPQSRRSSGEISSPLRKPKRLSRGA
QLGPESQEAEESMDSEKAEMDETLPGAASPRDSATGRRRLPLGGRTVAERVEAIEGSVLE
GSGSVTTIYMLAGTPQLSEGPVRSVLRRFGSFQKGQAGPKVKSAIPKPPRRALSRNKGSP
GLASGSAKQSPSLAPNEELTRSLESVGTGPEEVARGLGDGTKNSGRALELTPDSGPQEQD
PQKLADEEEQEEPQYENVAPISGLPVP
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcagcccgccccttcacactggtttcctcaggaaaggccttggaaggaagcagggag
ggggttgggagctgtgggggccagactaacccaaaccctctggctgaacgggccgccatg
ggactgaggctgctgctactgttgctgctctggacacaggggacccaggagtccaagctg
gaccccaatgggcagcatgtctgcctggccagcagcccctctgctgatatccagtgctgc
ccaggctggaggcagaaagatcaagaatgcactatccccatctgtgaggggctagatgcc
tgccgggaagatgaagtctgtgtgaaaccaggcctctgtcgatgcaaacctggattcttc
ggggcccagtgcaactcccgctgccccggccagtactggggccccgactgccgtgagatc
tgtgcctgccacccacacggccagtgcgagccggccacgggcgtgtgccactgccaagcg
gaccgctggggcggccgttgcgagttcgcttgcgcctgcggcccgcacgggcgttgcgac
cccgcgacgggcgcgtgccgctgcgagcccggctggtggtcgtccacttgccgccgcccg
tgccagtgcaacccggcggcggcgcgctgcgatcaagccgacggctcctgccgctgtgag
ccgggctggtggggccgccgctgcagcttccgctgcgcctgccatggctccccgtgcgca
caggagaccggccgctgcgtctgccgcccgggctggtggggccccgagtgccggcagcag
tgcgagtgcgtgcgcggtcgctgcagcgccgcctccggccagtgcgcctgcccgccgggc
ttccgcggtgcccgctgcgagctgccctgccgcgccggcagctacgggcctcactgccgc
gacagctgcggccactgcaagcacaaggagccatgctctgtagacacaggcagctgtgag
tcctgcgagccgggctggaacggaacccagtgccaccagccctgcccacctggcactttt
ggcgagagctgtggacagctgtgcccccactgccggcttggggaggcctgtcagccagac
actgggcactgtcaacactgtgaccctgggtggctggggcccaggtgtgaagacccctgc
ccgactggcacctatggggagggctgtagctctgcctgccacacctgtgttcaggggacc
tgtgatgctgtgaccggggagtgtatctgccatgctggctactggggacccagctgcaac
acttcatgcccacctggtttccatggcaacaactgctctgttccctgtgaatgtccagag
ggaccctgcaaccctgtctctggggcctgccagctggggcaccacagtcaggatgcagcc
ctcatcgctggcatccttgtgcctctgctgctgcttctcctgggcctcattttctgtgcc
tgctgctgctgggctgcccggttggaccccaaggacaggccagcaagcgatggagctgct
gtgtccaggatgaagctgcaggtctggggggcgctgagcagcctgggctccgcactaccg
tgtggtagcttcagcagccacaagcttccctgggtgacagtctctcaccatgacccggag
atccccttcaaccacagcttcattgagccaccctcggccggctgggcctcagatgactcc
ttctcttctgatcccgagtccggagaagacgagagcccggcctactgtgtaccaccccaa
gaagggatggtcactgtggcccacggagagtttgtagaagccagcctggctggaggtccc
gtccctccccccgaggacgcctccaccccgtttcccatcccgcgcacttccagcctcgcc
cgggccaaacggccgtcagtctcctttgccgaaggcaccaagtttgccccacagagtcgc
cgaagctcaggggaaatctccagtcctctccgaaagcccaaaaggctctcccggggggcc
caattgggccctgaaagccaggaggctgaagagtccatggactcagagaaagcagaaatg
gatgaaacccttcctggtgctgccagccccagggattcagccactggccgccgccggcta
cctcttggtggccggacagtggctgagcgtgtagaagccattgagggcagtgtcctggag
ggctcaggctctgtgactacgatctacatgctggcagggacaccccagttatctgagggc
ccagtccggtctgttctccgccgttttggtagcttccagaaaggccaggcagggcccaag
gtcaagagtgccatccccaagcctccacgccgggcccttagtcgaaataagggcagccct
ggactagcctctggctctgccaagcagagccccagcctagcccccaatgaagagcttact
aggtccttagagtctgtaggaactgggccagaggaagtggccagggggctgggggatggt
accaagaattcaggaagggccctggagctgacccctgacagtggcccccaagaacaggat
ccccaaaagctggctgatgaggaagagcaggaggagccccagtatgagaacgttgcaccc
atctctgggctaccagtaccctga
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