Neogale vison (American mink): 122906375
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Entry
122906375 CDS
T08764
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04082
Neuroactive ligand signaling
nvs04721
Synaptic vesicle cycle
nvs04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
122906375 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
122906375 (SLC6A4)
04721 Synaptic vesicle cycle
122906375 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nvs02000
]
122906375 (SLC6A4)
Transporters [BR:
nvs02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
122906375 (SLC6A4)
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Motif
Pfam:
SNF
5HT_transport_N
DUF8005
Motif
Other DBs
NCBI-GeneID:
122906375
NCBI-ProteinID:
XP_044104162
UniProt:
A0A8C7ANB6
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Position
5:27247303..27281064
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AA seq
630 aa
AA seq
DB search
METTPLNSQKELPACKDEDDCQENGVLQKGVPVPEDKVESGHISNGYSAVPSPGAGDDTQ
HALPAATTALVAEPHQGERETWGKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYAICIIAFYIASYYNTIM
AWALYYLISSFTDQLPWTSCTNSWNTGNCTNYFSGNNVTWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLTLCIMGIFAVIYFSIWKGVKMSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFNNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLGVVITCFFGSLAT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVYWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPLFLLFIICSFLMSPPQLRLFQYNYPQWSIILGYCIGTSSFICIPTYIAYRLIVT
PGTFKERIIKGITPETATEIPYGDIHLNAI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgcccttaaattcccagaaggagctgcccgcttgtaaggatgaagatgat
tgtcaggaaaatggagttctgcagaagggggtccccgttcctgaggacaaggtggagtct
ggccacatctccaatgggtactcggcggtgccgagccctggtgccggagacgacactcag
cacgcccttccggccgccaccaccgccctagtcgccgagcctcaccaaggggagcgggag
acctggggcaagaagatggatttcctcctgtcggttattggctatgcggtggacctgggc
aacgtctggcgttttccctacatctgctaccagaatggagggggggctttcctcctgccc
tacacgatcatggccattttcggggggatcccactgttctacatggagcttgcgctgggc
cagtaccaccgaaacggatgcatttccatatggaggaaaatctgcccgattttcaaaggg
atcggctatgccatctgcatcatcgccttctacatcgcctcctactacaacaccatcatg
gcctgggcgctctactacctcatctcctccttcaccgaccagctgccctggaccagctgc
accaactcctggaacacgggcaactgcaccaactatttctcggggaacaacgtcacctgg
acgctgcactcgacgtcccccgctgaagaattttacacgcgccatgtcctgcagatccat
cggtctaagggacttcaggacctgggtggcatcagctggcagctcaccctctgcatcatg
ggcatctttgctgtcatctacttcagcatctggaaaggtgtcaaaatgtctggcaaggtg
gtatgggtgacagccaccttcccttatatcatcctttcggtcctgctggtaaggggggcc
accctccccggagcctggaggggtgttctcttctacttgaaacccaactggcagaaactg
ctggagacgggagtgtgggtggatgctgccgctcagatcttcttctctcttggtcctggc
tttggggtcctgttggctttcgctagctacaacaagttcaacaacaactgttaccaagac
gccctggtgaccagcgtggtgaactgcatgacgagctttgtttccggatttgtcatcttc
acggtgctcgggtatatggccgagatgcggaacgaggatgtgtccgaggtggccaaagat
gcaggccccagcctcctcttcatcacgtatgcagaagccatagccaacatgccagcatcc
actttctttgccatcatcttcttcctgatgttaatcacgctgggcctggacagcaccttt
gcaggcttggagggggtgatcacagctgtgctcgacgagtttccacacatctgggccaag
cgccgggagtggtttgtgcttggtgttgtcattacgtgcttctttggctccctggccacc
ctgactttcggaggggcctacgtggtgaagctgctggaggagtatgccacgggccccgcg
gtgctcaccgttgtcctcatagaggctgtggctgtgtactggttttatggcatcactcag
ttctgcagtgacgtgaaggaaatgctcggcttcagccctgggtggttttggaggatctgc
tgggtcgccatcagccctctctttctcctgttcatcatctgcagttttttgatgagcccg
ccccagctccgacttttccagtataactaccctcagtggagtatcatcctgggttactgc
atagggacctcgtctttcatctgcatccccacatacatagcgtaccggctgatcgtcact
ccagggacatttaaagagcgtattattaaaggtatcactccagaaacagcgacagaaatt
ccctatggggacatccacttgaatgccatataa
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