Neogale vison (American mink): 122906446
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Entry
122906446 CDS
T08764
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03015
mRNA surveillance pathway
nvs05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122906446 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
122906446 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nvs03019
]
122906446 (HBS1L)
Messenger RNA biogenesis [BR:
nvs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
122906446 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
AAA_29
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
122906446
NCBI-ProteinID:
XP_044104318
LinkDB
All DBs
Position
1:66501835..66586701
Genome browser
AA seq
685 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDRPSLGEPVEEYDYD
DLKESSNSLLNHQLSGIDQARLYSCLDHMREVLGDTVPDDTLIEAVLKNKFDVQKALAMV
LEQDRMQNWKVKSEGAISTGKIAKGKSLDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTEENGHSFHTPQKGHLSEGTGIAASDVLDTVSKPVLPSHTIQTSEEQSSTPTPVKKSG
KLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSNELTKWYKGLCLLEQIDSFKP
PQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEIPITKGFP
VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcagttt
atttactcgcggcgtgacagaccttcccttggtgagcctgtagaagaatacgattacgac
gatctgaaagagtcctccaattctcttttgaaccatcagctgagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtgcttggagacactgtgccagatgac
actttgattgaagccgttctgaagaacaagtttgatgtgcagaaggctttggcaatggtt
ctggaacaagatagaatgcagaattggaaggtcaagagtgagggagcaatatctacaggg
aagatagcaaaaggaaaatcattagactcccagtcatctcgaagtgaatctgaaattgtg
ccaaaagttgctaaaatgactgtgtctggaaagaagcaaactatgggattcgaagtgcct
ggagtaactgaagaaaatggtcatagtttccacacacctcaaaaaggacatcttagtgaa
ggaactggcattgctgcttctgatgttcttgacactgtttctaaaccagttcttccatcc
cacaccattcaaacatcagaagagcagagctcaacaccaacgccggtgaaaaagtctggc
aagctgaggcagcagatagatgtcaaagcggaactggagaagcggcaaggagggaagcag
ctcctcaacttggtggtcattggtcatgttgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaa
agggaaaggggagtaacaatggatgttggtatgacgaagtttgagaccacaaccaaagtt
attacgttaatggatgctccaggccataaggatttcattccaaatatgattacaggagca
gcccaggcagatgtagccattttagttgtagacgccagcaggggagagtttgaagctggg
tttgagactgggggacaaacacgagaacatggcctcttggttcgctctcttggagtcacc
cagcttgcggttgcagtcaataagatggatcaggttaattggcaacaagaaaggtttcaa
gagattactggaaagcttgggcactttcttaagcaagcaggttttaaggaaagtgatgta
gcttttatccctacgagtggtctcagtggtgaaaatctaatcacaagatctcaatcaaat
gaactcacaaaatggtataaaggactttgtttattagaacaaattgattctttcaagcct
cctcagcgatctattgataagccttttagattatgtgtgtctgatgttttcaaagatcaa
ggatctggattttgtgtaactggtaaaattgaagctggttatatccagactggtgaccga
ctactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcacgatgaa
cccgtcgactgggcggcagcaggtgatcatgttagtcttacgttggttggcatggatatc
atcaagatcaatgttggctgcatattttgtggccccaaagaacccattaaagcttgtact
cgtttcagagctcgaatcctcatctttaatattgaaattcctatcactaaaggattccct
gtgctgttacactaccagactgtcagtgaacctgccgttattaaacgactgattagtgtc
ttaaacaaaagcacaggtgaagtcacaaagaagaagccaaaactgttgactaaaggccag
aatgccttggtggagctgcagacacaacgcccggtggctctggagctgtacaaagacttc
aaggagctgggcaggttcatgctgcgctatagcggctcgaccattgctgcaggcgtggtc
acggagataaaagaatga
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