Neogale vison (American mink): 122906473
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Entry
122906473 CDS
T08764
Symbol
DDX52
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nvs03009
]
122906473 (DDX52)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122906473 (DDX52)
Ribosome biogenesis [BR:
nvs03009
]
Eukaryotic type
90S particles
Helicases
122906473 (DDX52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
AAA_19
Cas3-like_C_2
FKBP_N
Motif
Other DBs
NCBI-GeneID:
122906473
NCBI-ProteinID:
XP_044104371
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Position
5:34018426..34040417
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AA seq
599 aa
AA seq
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MDAHDLFRRLGVGAKFDVKRFSADAARFQVGKRKHDFDSSEILQGLDFFGNKKSVPGECG
LSRTHQELQDEEKKEESLTEKKREQNKKKRKMMLSETTSQEEVSTIQWISSVEAKIEDKK
IKREKKLTSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSRLLQNI
LDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPTNKGFRALII
SPTRELANQIHRELVKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDILVTTPNRLIYLL
KQDPPGIDLTSVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVRRAMFSATFAYDV
EQWCKLNLDNVIMVSIGARNSAVETVEQELLFVGSETGKLLAMRELVKKGFNPPVLVFVQ
SIERAKELFHELIYEGINVDVIHADRTQQQRDNTVHSFRAGKIWVLICTALLARGIDFKG
VNLVINYDFPTSSVEYIHRIGRTGRAGHKGKAVTFFTEDDKPLLRSVANVIQQAGCPVPE
YIKGFQKLLSKQKKKMIKKPLERESISTTPKYFLEKAKNKRKKVPGQNSKKKVALEDKS
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggacgctcacgatctcttccgccggctcggcgtgggggccaagttcgacgtgaaacgt
ttctctgcggacgccgcgcgattccaggtaggaaaaaggaaacatgattttgattcttca
gagattctgcagggactggacttctttggaaacaagaagtctgtcccaggtgagtgtgga
ttatcaagaactcaccaggagcttcaagatgaagagaaaaaagaagagagtctaactgaa
aagaagagggaacagaacaagaaaaagaggaaaatgatgttatcagaaactacttctcaa
gaagaagtttctactatacagtggatatcatctgtggaagcaaagattgaagataaaaaa
attaaaagagaaaagaagctaacttcaggaaagttggagaatctcagaaaagaaaagata
aacttcttccggaataaacataaaattcacgtccagggaactgatcttcctgacccaatt
gctacctttcagcaacttgaccaagaatataaaattagttctcgactgcttcagaacatt
ctggatgcaggcttccagatgcctacaccaatccaaatgcaagccattccagttatgttg
catggtcgagaacttctggcttctgctcctaccggatctggaaagactttggcgtttagc
atccccattttgatgcaactaaaacaacccacaaataaaggctttagagctctgattata
tcaccaacacgagaacttgccaaccagattcacagagagttagtaaaaatctcagaggga
acaggattcaggatacatatgatccacaaagcagcagtggcagccaagaaatttggacct
aaatcatctaagaagttcgatattcttgtgactactccaaatcgactaatctatttatta
aagcaagatcctccaggaatagatttaacaagtgtagagtggctggtagtagatgaatca
gacaaactgtttgaagatggcaaaactgggttcagagaccagctggcttccattttcctg
gcctgcacatcccataaggtcagaagagctatgttcagtgcaactttcgcatatgatgtt
gagcagtggtgcaaactcaacctggacaatgtcattatggtatccattggagcaaggaat
tctgcagtagaaactgtagaacaagagcttctctttgttgggtctgagactgggaaactt
ctggccatgagagaacttgttaaaaagggtttcaatccacctgttcttgtttttgttcag
tccatcgaaagggctaaagaactttttcatgagctcatatatgaaggtattaatgtagat
gttattcatgcagacagaacacagcaacagagagataacacagtccacagcttccgagct
ggaaaaatctgggttcttatttgtacagccttgctggcccgtgggattgattttaaaggt
gtgaacttggtgatcaactatgattttccaaccagctcagtggaatacatccacaggata
ggtcgaactggaagagcggggcataaaggaaaagctgttacatttttcactgaagatgat
aaaccattattaagaagtgttgccaatgttatacagcaggctggatgtcctgtgccagaa
tacataaaaggtttccagaaactactaagcaaacaaaagaaaaagatgattaagaagcca
ttggaaagggagagcattagtacaactccaaaatatttcttagaaaaggctaagaataaa
cggaaaaaggtccctggtcagaacagcaagaagaaagtagctcttgaagacaaaagttaa
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