Neogale vison (American mink): 122906549
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Entry
122906549 CDS
T08764
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04064
NF-kappa B signaling pathway
nvs04622
RIG-I-like receptor signaling pathway
nvs05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
122906549 (TRIM25)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122906549 (TRIM25)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
122906549 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nvs04121
]
122906549 (TRIM25)
Enzymes [BR:
nvs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122906549 (TRIM25)
Ubiquitin system [BR:
nvs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122906549 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-B_box
C5HCH
MnmE_helical
NigD_N-like
LAMB1
Motif
Other DBs
NCBI-GeneID:
122906549
NCBI-ProteinID:
XP_044104557
LinkDB
All DBs
Position
5:39748479..39769285
Genome browser
AA seq
653 aa
AA seq
DB search
MAELVPLAEELSCSICLEPFKEPVTTPCGHNFCGLCLDETWAVQGSPYLCPQCRASYHAR
PQLRKNTVLCAVVEQFLQAEEARATPPPPDDWKLPTRAAAPSPAGPVACDHCLKEVAVKT
CLVCMASFCREHLQPHLDSPAFRDHQLQPPVQDLMRRKCPRHNRLRELFCPQHDECICHI
CLVEHKACSPVPLSQASADLETKLKHKLTVIYSQINGASRALEDVRARQHDVREATNRRM
EQLRQEYMEIKALIDAAEATSTRKIKEEEKRVNTKFDNIYQILLKKRSEIQNLKEAVELV
LTKGDEFEFLEKGLKLQGVSTKPVYVPKVELNQELIRGVCQGTSDLKDELKRSIRQSQDK
KPEEPTSSGNPGEHGPAPTHKPTHSAKKAPKEEKKPKKPPPASAFKMPTFGASATKMPTF
GAQGEFVDPEGIGKAPTAQPNAAAVKAKVLETFLAKSRPELLEYAVKFSLDYNTAHNKVA
LSENYTVASVAESPLNYQPHPKRFMYCSQVLGLHCYKKGIHYWEVELQKNNFCGVGVCYG
SMPRQGPESRLGRNSASWCVEWFNTKISAWHNNVEKTLPSTKATRVGVLLNCDHGFVIFF
AVSDKVHLMYKFKVDFTEALYPAFWVFSAGAMLSICSYKESAAAACSSPGDVA
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggagctggtccccctggccgaggagctgtcgtgctccatctgcctggagcctttc
aaggagccggtcaccacgccctgcggccacaacttctgcggcttgtgcctggacgagacg
tgggccgtccagggctcgccgtatctgtgcccgcagtgccgcgccagctaccacgcgcga
ccgcagctgcgcaagaacaccgtgctgtgcgcggtggtggagcagttcctgcaggccgag
gaggcccgggcgacgcccccgccccccgacgactggaagctgcccacccgcgccgccgcg
cccagcccggcgggcccggtggcctgcgaccactgcctgaaggaggtcgccgtcaagacg
tgcctggtgtgcatggcctccttctgccgggagcacctgcagccgcacctggacagcccc
gccttccgggaccaccagctgcagcccccagtccaggacctgatgcgtcgcaagtgcccc
cggcacaaccggctgcgggaattattctgcccccagcacgacgagtgcatctgccacatc
tgcctagtggagcacaaggcctgctcgcctgtgcccctgagccaggccagcgccgacctg
gagaccaagctgaagcataagctgaccgtcatctacagtcagatcaacggggcctcgagg
gctctggaggacgtgagagcccggcagcacgatgtgcgggaggctacgaatcggaggatg
gagcagctgagacaggagtacatggaaatcaaggcgctcatcgacgctgcagaggccacc
tccactcggaagataaaggaggaggagaagagagtcaataccaagtttgacaacatctac
cagatccttctcaagaagaggagtgagatccagaatctgaaggaggcggttgaacttgtc
ctgaccaagggggacgagttcgagtttctggagaaagggctaaagctgcaaggagtgtcc
acaaagccggtctacgtccccaaagtggagctaaatcaggagctgataaggggcgtctgt
cagggcacctcagacctcaaagacgagctgaagcggtctatcaggcagtcccaggacaag
aagcccgaggagcccaccagctcagggaaccctggagagcatggcccagcacccacgcac
aaacccacccactctgcgaaaaaggcccctaaagaagaaaagaaacccaagaaacctccc
cccgcctcagccttcaagatgcccacctttggagcctcggccaccaagatgcccaccttc
ggagcccagggagagttcgtggatccggagggtataggcaaagcccccactgcacagccc
aacgcggcggccgtcaaggccaaggtgctggagaccttcttagccaagtccaggcctgag
ctcctggagtatgcggttaaattcagcctggactacaacacggcccacaacaaggtggcg
ctgtcggagaactacacggtcgcctctgtggctgaatcacccctgaactaccagccgcat
cccaagaggttcatgtactgctctcaggtgctgggcctgcactgctacaagaaagggatc
cactactgggaggtggagctgcagaagaacaacttctgcggggtgggcgtctgctacggc
agcatgccgcgccagggtcccgagagccggctgggccgcaacagcgcctcgtggtgcgtg
gagtggttcaacaccaagatctctgcgtggcacaacaacgtggagaaaacgctgccctcc
accaaggccacgcgggtcggcgtgctgctcaactgtgaccatggctttgtcatcttcttt
gccgtctccgacaaggtccacctgatgtataagttcaaagtggacttcacggaagcgctg
tacccggccttctgggtgttctctgctggtgccatgctctccatctgctcctacaaggag
tctgcagccgctgcgtgctcttccccaggtgatgtggcgtga
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integrated database retrieval system
