Neogale vison (American mink): 122906855
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Entry
122906855 CDS
T08764
Symbol
RAI1
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nvs03000
]
122906855 (RAI1)
Transcription factors [BR:
nvs03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
122906855 (RAI1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
122906855
NCBI-ProteinID:
XP_044105224
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All DBs
Position
5:69866346..69984672
Genome browser
AA seq
1901 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPGQAGLSCDRQRLLAKDYYNPQPYPAYE
GGASAPAGSARGSKGLASQPSLQGRPAFSGYSVPDSSPYPGRYSGEESLQAWGAPQPPPP
QPQPLPGGVGKYDDSLMKKAAVPPGRQYPEQGAQLPFRTHSLHVQPQLPQPQQPLAYPKL
QRQKLQNDMASPLPFPQGGHFPQHSQSFPPSSTYSSGGQGTQGGGGGGGGQGAHSYKSCT
APSAPPHDRPLAANASLAPGQRVQNLHAYQSGRMGYEQQKQQQQQQQQQQAALQSRHHAQ
ETLHYQNLAKYQHYGQQGAGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTP
SPLMPNLESFPYNQQALGTGAFPAGITDHSHFMPLLNPSPTDATGTVDTQPGNCKAPPKD
KLPENLLSDLSLQSLTALTSQVENISNTVQQLLLSKATVPQKKGGKNLVSRTPEQHRSQH
CSPEGSGYSAEPAGTPLSEPLSSTPQSTHAEPPEADYLSGSEDPLERSFLYCNQARGSPA
RVNSNSKAKPESVSTCSVTSPDDMSTKSDDSFQSLHGSLPLDSFSKFVAGERDCPRLLLS
ALAQEDLASEILGLQEAIGEKAEKTWAEAPGLAKDASKPPPFSLENHSACLDSVAKNAWP
RPGEPEALPESLQLDKGGSAKDFSPGLFEDPSVAFAAPDPKKTTGPLSFSTKATLGAATS
DPAAAAFDCFPDASTASSADGANPFAWPEENLGDACPRWGLHPSELTKGLEQGGKASDGV
GKENAHEASACPGFQEEAPPGEKAILPRDSTQEEAGGVKEEVGGLLQCPEVGKADRWLED
SRHCCSAADFGDLPLLPPPGRKEDLEAEEEYSSLCELLGSPEQRPGLPDPLSPKAPLLCT
KEEVEEVLDSKTGWGSPCHLSGDSVILLGPTVGAESKVQSWFESSLSHMKPGEEGPDGVL
APGDTATLAPEASLAQKPSKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAP
VLPKDLLLPESCTGPPQGQMEGAGAPGRGASEGLPRMCTRSFTALSEPRTPGPPGLTTTP
APPDKLGGKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPSTPG
KDQRSMILRSRTKTQEAFHSKRRRPSESRLPSCRATKKLLANNHLPAPFKVSGSPQKEGR
ASQRARVAKPGAGSKLSDRPLHALKRKSAFLAPVPTKKRNLVLRSGSAGEVKEEGAEDPS
PLFKRMASPKKAKPAKGNGEPAVKPLPPETPDTCLKLASRAAFQGAMKTKVLPPRKGRGL
KLEAIVQKITSPSLKKFACKVPGAPPGNPLSPSLPEKDRGLKSAGGSPVGAGEGLLNVGP
GQKLPAAPGADPLCRNPTNRSLKGKLLNSKKLSSTDCFKTEAFTSPEALLPGGTALAPKK
RSRKGRAGALGLPKGPLEKRPHLGPALLLTPQDRANGTQGGSEDSSGGAGKKPKTEDLGL
ASQSPEGRPCQPQTRAQKQPGHTNYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRRQQQVL
PLDPAEPEIRLKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTICTVVNSPGEEPKPHRK
PSSSASSSSSSCSFSLDATGASLATLPGGSVLQPRPSLPLSSTMHLGPVVSKALSTSCLV
CCLCQNPANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGACEEASLPLERTLKDLECA
ATAAAGKPLRPEGPADPAKQGSLRTSTRGLSRRLQSCYCCDGRGDGGEEAAPTDKSRKHE
CSKEPPAEPGGDTQEHWVHEACAVWTGGIYLVAGKLFGLQEAMKVAVDMTCSSCQEAGAT
IGCGHKGCSHTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5706 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcacaggagacatctcgcctggagaattacagacagccaggccaggccgggctgagctgc
gaccggcagcggctgctggccaaggactattataacccgcagccctacccagcctacgag
ggtggcgccagtgcacccgccggctccgcgcggggtagcaagggcctggcctcccagccg
tccctgcagggccggccggccttctcaggctatagtgtgccggacagcagcccatacccc
ggccgctactctggcgaggagagcctgcaggcctggggggcccctcagccgccgcccccg
cagccgcagcccctgccagggggtgtgggcaaatatgacgacagcttgatgaaaaaggca
gcggtgcccccgggcaggcagtacccagagcaaggtgcccagctgcccttccggactcac
tctctgcacgtccagccgcagctgccgcagccccaacagcccctggcataccccaaactc
caaaggcagaaactgcagaatgacatggcctcacccctgcccttcccccagggtggccat
ttcccccagcactcacagtctttccccccttcctccacctactcctccgggggccagggc
acgcaggggggcgggggcggcgggggcgggcagggggcccactcctacaagagctgcacc
gcgccgtccgcgccgccccacgacaggccactggccgccaatgccagcctggccccgggg
cagcgggtccagaaccttcacgcctaccagtctggccgcatgggctacgagcagcagaag
cagcagcagcagcagcaacagcagcagcaggcggccctccagagccggcaccatgcccag
gaaaccctccattaccaaaaccttgccaagtaccaacactatgggcagcagggcgcgggc
tactgccagccggacgcggccgtgcggactccggagcagtactaccagaccttcagccct
agctccagccactcgcctgcacgctccgtgggccgctcaccctcctacagctccacccca
tcgccgctgatgccaaacctggagagcttcccctacaaccagcaggcgctcggcaccggc
gccttccccgcgggcatcacggaccacagccacttcatgcccctgctcaacccctccccg
actgatgccaccggcacggtggacacccagcctggcaactgcaaggcgccgcccaaggac
aagctgccggagaacctgctgtcggacctcagcctgcagagcctcacggccttgacctcc
caggtggagaacatctccaacacggtccagcagctgctgctctctaaggccaccgtgccg
cagaagaagggcggcaagaacctggtgtccaggaccccagagcagcaccggagccagcac
tgcagccccgagggcagcggctactcggccgagccagcaggcacgccgctatccgagccg
ctgagcagcacgccgcagtccacgcacgctgagccacctgaggccgactacctgagcggc
tccgaggacccgctggagcgcagcttcctctactgcaaccaagcccgtggcagccccgcc
agggtcaacagcaactcgaaggccaagcctgagtcggtgtccacctgctcggtgacctcg
cccgacgacatgtccaccaagtccgatgactccttccagagcctacatggcagcctgccg
ctcgacagcttctccaagttcgtggcgggcgagcgggactgcccgcggctgctgctcagc
gccctggcgcaggaggacctggcctccgagatcctcgggctgcaggaggccatcggcgag
aaggctgagaagacctgggccgaggcgcccggcctggccaaggacgccagcaagcctcct
cccttctcgctggagaaccacagcgcctgcctggactctgtggccaagaacgcgtggcca
cggccaggggagccagaggccctgcccgagtccttgcagctggacaagggtggcagcgcc
aaggacttcagcccggggctgttcgaagacccttctgtggccttcgccgccccggacccc
aagaagacgaccggtcccctctcctttagcaccaaggccacgcttggggccgccacatcg
gaccctgctgcggccgcctttgactgcttcccggacgcgagcaccgctagctcagcagac
ggcgccaacccctttgcctggcctgaagagaacctgggggatgcttgtccccggtggggc
ctgcaccccagcgagctcaccaagggcctggagcagggcgggaaggcctctgacggcgtg
ggcaaggagaatgcccacgaggcttcggcctgcccaggcttccaggaggaggcgccgcct
ggggagaaggccatcttgcctagggactccacgcaggaggaggcgggcggggtgaaggag
gaggtgggcgggctgctgcagtgccccgaggtgggcaaggccgaccgctggctagaggac
agtcggcactgctgctcggccgccgactttggggacctgcccctgctgccgccacccggc
aggaaggaggacctggaggcggaggaggagtactcctccctgtgcgagctcctgggcagc
cccgagcagaggcccggcctgccggacccgctgtcgccgaaggcccccctgctgtgcacc
aaggaggaggtggaggaggtgctggactccaaaaccggttggggctccccgtgccacctg
tccggcgactctgtcattttgctgggccccactgtgggtgccgagtccaaggtccagagc
tggtttgagtcctccctgtcgcacatgaagccgggtgaagagggccccgacggggtgctg
gcgcccggtgacaccgccaccctggccccagaggcctccctggcccagaagcccagcaag
ccggccgtgcctgaggcacccattgctaaaaaagagcccgtgccacgcggcaaaagctta
cggagccggcgggtgcaccgggggttgccggaggctgaggactccccatgccgggcgccc
gtgctgcctaaggacctcttactcccagaatcctgcaccggccccccacagggacagatg
gaaggagcgggagccccgggccggggggcctcggaagggctcccgaggatgtgcacacgc
tccttcacggccctgagtgagccccgcacgcctggacccccaggcctgaccaccaccccc
gcccccccggataaactagggggcaagcagcgagccgccttcaagtccggcaagcgggtg
ggtaagccgtcacccaaggcagcctccagccccagtaacccagctgccttgcccgtggcc
tcagacagcagccccatgggctccaagaccaaggagacagactcgcccagcaccccaggc
aaggaccagcgctccatgatcctgcggtcacgcacgaaaacccaggaggcgttccactcc
aagaggcggcggccctccgagagccgtctccccagctgccgggccaccaagaaactgctg
gctaacaaccacctgcctgccccattcaaggtctctggcagcccccagaaggagggcagg
gccagccagcgggcccgggtggccaagcctggagcaggcagcaagctctccgaccggcct
ctccatgcgctcaagaggaagtcggccttcctggcgcccgttcccaccaagaagcggaac
ctggttctgcggagcggcagcgcgggggaagtgaaggaggagggggctgaggacccctcc
cccctcttcaagaggatggcttcgcccaagaaggccaagcccgccaagggcaatggtgag
cctgccgtgaagcccctacccccggagacccccgacacctgcctgaagctcgcctcgcgg
gcggccttccagggggccatgaagaccaaggtgcttccgccccggaaaggcaggggcctc
aagttggaggccattgtgcagaagatcacgtcacccagcctgaagaagtttgcgtgcaaa
gtgccgggggcccctcccggaaaccccctgagcccttctctccctgagaaggaccgtggg
ctcaagagtgcggggggaagcccagttggggcaggagaaggtctcttaaatgtgggccct
gggcaaaagctcccggcagctccgggggccgacccgttatgcagaaatccgaccaacaga
tccttaaaaggcaaactcctaaacagtaagaaactgtcctcgactgactgtttcaaaact
gaggccttcacatccccagaggccctgctgcccggggggactgccctggcacctaagaag
agaagccggaaaggcagggctggagcccttggactccccaaaggtcccctggagaagcgg
ccccatctaggaccggctctgctcctgaccccccaagacagggccaatggcactcagggg
ggcagtgaggacagctctggtggtgcaggcaagaagccaaagacggaggacctgggcctg
gcctcccagtcccctgagggccggccctgccagccccagacaagggcacagaagcagccg
ggccacaccaactacagcagctattccaagcgaaagcgtctcactcggggccgggccaag
aacaccacctcctcaccctgtaaaggacgtgccaagcggcggcggcagcagcaggtgctg
cccctggaccccgccgagcctgaaatccgcctcaagtacatttcctcgtgcaagcggctt
cgagcagacagccgcaccccggccttctcgccctttgtgcgggtagagaagcgagacgcg
ttcaccaccatatgcactgtggtcaactcccctggggaggagcccaagccccacaggaag
ccttcctcctccgcctcctcttcctcatcctcatgctccttctccttggatgcgaccggg
gcctccttggccacgctccctggaggctctgtcctgcagccacggccctccctgcccctc
tcctccaccatgcatctggggcccgtggtctccaaggccctgagtacctcttgccttgtt
tgctgcctctgccaaaacccggccaacttcaaggacctcggggacctctgtgggccctac
taccccgaacactgcctccccaaaaagaagccaaaactcaaggagaaggtgcggccggag
ggcgcctgcgaggaggcctcactgccccttgagagaacactcaaagaccttgagtgcgca
gccacagcggccgctggaaaacccctgcggcccgagggccccgccgaccccgccaagcag
ggctcgctgcgcaccagcactcggggcctgtcccggcggctacagagttgctactgctgt
gacggtcggggggacggtggtgaggaggcggcccccaccgacaagagccgtaagcacgag
tgcagcaaggagccaccagccgagcctggtggggacacccaggaacactgggtgcacgag
gcctgcgccgtgtggacgggcgggatctacctggtagccgggaagctctttgggctacag
gaggccatgaaggtggccgtggacatgacctgttccagctgccaagaagccggggccacc
attgggtgcggtcacaaagggtgcagccatacctaccattacccgtgtgccagtgatgcg
ggttgcatattcatcgaagagaacttttctttgaagtgtcccaaacataagaggctgccg
ctgtaa
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