Neogale vison (American mink): 122906869
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Entry
122906869 CDS
T08764
Symbol
TOP3A
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03440
Homologous recombination
nvs03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122906869 (TOP3A)
03460 Fanconi anemia pathway
122906869 (TOP3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nvs03032
]
122906869 (TOP3A)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122906869 (TOP3A)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122906869 (TOP3A)
DNA replication proteins [BR:
nvs03032
]
Eukaryotic type
DNA Topoisomerases
122906869 (TOP3A)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
122906869 (TOP3A)
FA (Fanconi anemia) pathway
122906869 (TOP3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Zn_ribbon_Top1
Toprim
zf-C2H2_10
Zn_ribbon_GRF_2
Zn_ribbon_recom
Lar_restr_allev
Motif
Other DBs
NCBI-GeneID:
122906869
NCBI-ProteinID:
XP_044105264
LinkDB
All DBs
Position
5:complement(70385731..70411819)
Genome browser
AA seq
994 aa
AA seq
DB search
MIFPVARCALRWLERPGARTLSRAAMAVAFRGMRKILCVAEKNDAAKGIADLLSNGRMRR
REGFSKFNKIYEFDYHLYGQNVTMIMTSVSGHLLAHDFQMQFRKWQSCNPLVLFEAEIEK
YCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCRAVKPSLPVLRARFSE
ITPRAVRAACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEIFHKIKVTHDHKDGVVEFNWKRHRLFNHTACLVLY
QLCMEDPRATVVEVRSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNVFPKDLNLTALVEQQIPDPRWGAFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTGSLQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLVILARNYLDV
YPYDHWSDKTLPVYERGARFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTADKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKK
DKWVVLRQQVQKYKQVFIEAVAKAKKLDEALAQYFGEGAEVAQEEAIYPSMPEPIKKCPQ
CNKDMVLKTKKNGGFYLSCMGFPECRSAVWFPDSVLEASRDASVCPVCQPHPVYRLKLKF
KRGSLPPTMPLEFVGCIGGCDETLREILDLRFSRGPPRASQSASQPSNYLQASQSLNRMD
STPWMPPPPATAAGGSNSVTCNCGQEAVLLTVRKEGPNQGRQFYKCSGGGCSFFLWANSS
PPEARGPPSSTSRPPGGSMGRPPATGDRRGRSGRPGDDSGGGGGGGSMSCLCSQPAVTRT
VQKDGPNKGRQFHTCAKPREQQCGFFQWVDENMAPGTFRALSWPGSRGGTQGPEARSKRA
RAGSTDSGSMPKKPRKCSLCHQPGHTRPSCPQNR
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgatcttcccggtcgcccgttgcgcgctccgctggctggaacggccgggagcccggacc
ttgtcccgcgctgccatggcggtggccttccgaggcatgcggaaaattctctgtgtggcc
gagaagaacgacgcggccaaggggatagccgacctgctgtccaacggtcgcatgaggcgg
agggaaggattttcaaaattcaacaagatctatgaatttgattatcatctatatggccag
aacgttaccatgataatgacttcagtttctggacatttgctggctcatgatttccagatg
cagtttcgcaaatggcagagctgcaatcccctggtcctctttgaagcagaaattgaaaag
tattgcccggagaattttgtagacatcaagaaaactctggaacgagagactcggcagtgc
caggccctggtgatctggaccgactgtgatagagaaggtgaaaacatcgggtttgaaatt
atccacgtgtgcagggctgtgaagcccagtctgccggtgctgagagcccgtttctcagag
atcaccccccgagccgtccgggcggcctgtgaaaacctgacggagcccgatcagagagtg
agcgatgccgtggacgtgagacaggagctggacctgagaatcggagccgccttcactagg
ttccagaccctgaggcttcagaggatttttcccgaggtgttggcagagcagctaatcagt
tacggcagctgccagttcccaaccctggggtttgtggtggagagattcaaagccattcag
gcttttgtgccggaaatcttccacaaaattaaagtaactcatgaccataaagatggagtc
gtagaattcaactggaaaaggcatcgtctctttaaccacacggcttgtcttgtcctctac
cagctgtgcatggaggatcccagggcaaccgtggtggaggtcaggtctaaggcaaagagc
aagtggaggcctcaagctttggatactgtggaacttgagaagctggcttctcgaaagttg
agaataaatgctaaagaaaccatgaggattgccgaaaagctctacactcaagggtacatt
agctatcctcgcactgaaacaaatgttttccccaaagacttgaacttgaccgcgctggtg
gagcagcagatcccagatccacgctggggcgcctttgcccagagcattctggagcggggt
ggccccactccacgcaatgggaacaagtctgatcaagctcaccctcccatccaccccacc
aaatataccggcagcctacagggagatgagcagcgactgtatgagttcatagtgcgccat
ttcctggcctgctgctcccaggatgctcagggccaggagaccactgtggagatcgacatc
gcacaggaacgcttcgtggctcatggccttgtgattttggcccgcaactatctggacgtg
tacccatatgaccactggagtgacaagaccctccctgtctacgagagaggcgcccgcttc
cagcccagcactgtggagatggtggacggggagaccagcccaccccagctgctcaccgaa
gccgacctcatcgccctcatggagaagcacggcattgggactgatgccactcacgcggag
cacatcgagacaatcaaggcccggatgtacgttgggctcacggcggacaagcggtttctc
ccggggcatctgggcatggggctcgtggaaggttatgactccatgggctatgagatgtcc
aagcctgacctccgggccgagctggaagctgacctgaagctgatctgtgaaggcaagaag
gacaagtgggtggttctaaggcagcaagtccagaaatacaagcaggttttcattgaagcg
gtggccaaagctaagaaattggatgaggcgttagcccagtactttggggaaggggccgag
gtggcccaggaggaagccatctacccaagcatgccggagcccatcaagaagtgtccacag
tgcaacaaggacatggtcctcaagaccaagaagaacggcgggttctacctcagctgcatg
ggcttcccagaatgccggtcagccgtgtggttccctgactctgtgctggaggccagcagg
gacgcgagcgtgtgtccagtgtgtcagccgcacccggtttacaggttgaagttgaagttc
aaacgcggcagccttcccccgaccatgcccctggagtttgtcggctgcattggcggatgc
gacgagacgctgcgggagatcttggacctgaggttctcacggggccctcccagagcttcc
cagtcagccagccagccctcgaactacctgcaggctagccagtccctaaacagaatggac
agcaccccctggatgccaccaccacctgctaccgccgcggggggcagcaactcggtgacc
tgcaactgcggccaggaggccgtcctgctcacagtgcgaaaggagggccccaaccagggc
cgccagttctacaagtgcagtggtggtggctgcagcttcttcctatgggccaacagcagc
ccccccgaagccagggggcctccctcctccacctcaagaccccctggtggctcaatgggc
cgcccgcctgccacaggggaccgccggggcaggtctggccgacccggggatgacagtggt
ggtggcggcgggggggggagcatgtcgtgcctatgcagccagcccgccgtcacccggact
gtgcagaaggacggccccaacaagggccgccagttccacacgtgtgccaagcccagggag
cagcagtgcggcttctttcagtgggtggatgaaaacatggctccagggactttcagagcc
ctgagctggccaggaagcagaggaggaacccaggggccagaggccagaagcaaaagagcc
cgggccggttccacagactcagggtccatgcccaagaaaccccggaaatgcagcctttgc
caccagcctggacatacccgtccctcctgtccccagaacagatga
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