Neogale vison (American mink): 122906925
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Entry
122906925 CDS
T08764
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122906925 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122906925 (SPATA13)
Membrane trafficking [BR:
nvs04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122906925 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
PH
SH3_9
SH3_2
DUF6377
Motif
Other DBs
NCBI-GeneID:
122906925
NCBI-ProteinID:
XP_044105357
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All DBs
Position
5:complement(86582793..86732678)
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AA seq
1215 aa
AA seq
DB search
MTTAQNGHGRLAAIPCSVSDPKDPKMVTYPACQNGGCSSSYCGEAEAQEARLSPAKLMRL
FSVSRKRTGTNPERPRSMVLMGNSSTWNALASFRKMGSFKKLKSSVLQGIQNREGSDVPR
EDPPERDPGKPISNGAAMGMQPSRCPNSGPVSDAPKAGPGGVSDCSDLEEADDAFQRSTH
RSRSIRRAYGLGRISLLDGPGSQNHVRPLAPGAQEPTVCEILVKDSENNSIIYRKSKSTD
NLNFLKKSSFKRKSTSNLMDLKGAQEKPAPRRTLSSSSADPEKFGGSERRTKRWKSPLRA
KDFDRVLRFVSSATDAAWRKESPRSGAPSPGEASQRLQVHSQLHDAYSRRVSTSAEREWR
RCAGAHAGSGCGSPGALSPRVDVDTAVFPLEAPGSWAPESARPCAASASSSPVAQDSEER
RAGGQFTFEPEQPLVPPRPTTPKPPSPHSPGAGSAACPNSLSVLSLSSVDSEERAEGPVT
SRDSVQATCDKGSEDSAGSHPPLSPHLASGAEERREEVVTEESWRRDSSRDEERTESQRI
TRRKWGSGRRARPRPLSDYGQLANRSLSIPEDSIAVDPQKEDTVEGDHLPNMASTDSTDQ
SDTADQSAAVGCPKGSWRRRPISVIGGVSFYGNSPTEEIESLLTQPAARPPVPAHRVLPY
KAVSARFRPFTFSQSTPIGLDRVGRRRQMRASNVSSDGGTESTALVDDNGSEEDYSYEDL
CQANPRYLQPGGEQLAINELISDGSVVCAEALWDHVTMDDQELGFKAGDVIQVLEASNKD
WWWGRNEDKEAWFPASFVRLRVNQEELSENSSSTQGEEQEEDAGKNRHKHLESKHQMRTN
VIQEIMNTERVYIKHLKDICEGYIRQCRKHTGMFTVAQLATIFGNIEDIYKFQRKFLKDL
EKQYNKEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPGACAELSNLMKQGRYRHFFEACRL
LQQMIDIAIDGFLLTPVQKICKYPLQLAELLKYTTPEHSDYNNIKAAYEAMKNVACLINE
RKRRLESIDKIARWQVSIVGWEGLDILDRSSELIHSGELTKVTRHGKSQQRTFFLFDHQL
VSCKKDLLRRDVLYYRGRTDMDDVELVDLEDGRDKDWNLSVKNAFKLVSKSTDEVHLFCA
RKQEDKVRWLQACEDERRRVREDREMGMEISENQKKLAMLNAQKAGHGKSKEPVGRQLKW
PWPWVKSNLLDFHRT
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagcccagaatggccacgggcgacttgctgcaatcccgtgttctgtctctgat
cccaaagaccccaaaatggtgacttacccggcgtgtcagaatggaggatgcagcagcagc
tactgcggggaggcagaagcccaggaggctagactcagccctgctaagctcatgcgcctc
ttctccgtgagcaggaagaggactggcaccaacccggagaggccccgctccatggtcttg
atgggaaattcctctacctggaatgcccttgcctcctttcggaaaatgggatctttcaaa
aaattgaagtcctccgtccttcaaggaattcagaaccgagaggggtcagatgtgccaagg
gaagaccctccagaacgtgacccggggaaacccatctcaaacggtgctgcaatgggaatg
caacccagcaggtgccccaactcgggaccagtaagtgatgccccgaaggcagggccgggg
ggcgtgtcggactgctccgacctggaggaggccgacgatgccttccagaggagcacccat
cggtcccgaagcatccgccgtgcctatggcctgggccgcatcagcctcctggatggtcca
gggtcccagaaccatgtccgtccgctggcccccggcgcccaggagcccaccgtgtgtgag
atcctcgtgaaagactccgagaacaacagcatcatctacaggaaaagcaagagcacggat
aacttgaactttctgaagaagagctccttcaagcggaagtccacgtcaaatctcatggac
ctcaagggggcacaggaaaagcccgcgccccgacggacgctaagcagttcatcggccgac
ccggagaagttcggtggctccgagaggaggacgaagcgttggaagagcccgctgcgggcc
aaggactttgaccgcgtcctgaggtttgtgagcagcgccacggacgcggcctggaggaaa
gagagccccaggagcggggcgccctcgccgggcgaggcgagccagaggctgcaggtgcac
agccagctgcacgacgcttactcccgccgtgtgtccaccagcgccgagcgcgagtggagg
aggtgcgcgggcgcacacgccggctccggctgcggctcgcccggggccctgagcccccgg
gtggacgtggacaccgccgtctttcctctggaagccccaggctcctgggcgccggagagt
gcccgtccttgcgccgccagcgcctcgtcgagtccggttgcccaggactccgaggaacgc
cgagccggcggccagtttacgttcgaacccgagcagccgctcgtccctccaaggcccacc
acgcccaagccccctagcccccacagcccaggcgcgggaagtgccgcgtgtcccaacagc
ctcagcgtgctgtccctcagttcagtggacagtgaagaaagggcagaggggcctgtgacc
tcccgggattctgtgcaagccacgtgtgacaaaggcagtgaggacagcgccggcagccac
cctccgctgagcccccacctggcgtcgggtgcagaagaaaggagggaggaggttgtgaca
gaggaatcctggaggcgggactcatcccgggatgaagaaaggaccgagtctcagaggatc
accaggaggaaatggggttctgggagaagagcaaggcctcgacctctttccgactatggc
cagctggccaaccggagtctgtccattcctgaagactcaattgctgtagacccccagaaa
gaggacactgtggagggagaccacctgcccaacatggcctccacggactctacagaccag
agcgacactgcagaccagagcgctgctgtgggctgccccaaaggaagctggagaagacgc
cccatctctgtgataggcggcgtcagcttctatgggaacagcccgacagaggaaatcgag
agtcttctaacccaaccagcagccaggcctcccgtgccagcccaccgggtgctgccctac
aaggcggtttcggcccgtttccggcccttcaccttctcccagagcacccccattgggctg
gaccgcgtgggacgccggcggcagatgcgagcttccaatgtctcttcagatggaggtact
gagtccacggccttagtggatgacaacggcagtgaggaagactatagctatgaagacctg
tgtcaggccaaccccagatacctacagccaggcggggagcagctggccatcaacgagctg
atcagcgatggcagtgtggtctgtgcagaagccttatgggaccacgtgaccatggatgac
caggaactgggcttcaaggcaggagatgtcatccaggtcctggaagcctctaacaaggac
tggtggtggggccggaatgaggacaaggaggcctggttccccgcaagctttgtcagattg
cgtgtcaatcaggaggagctgtcggagaattccagcagcacccagggcgaggagcaggag
gaagatgccggcaagaaccgccacaaacacttggagagcaagcaccagatgaggaccaat
gtcatccaggagatcatgaacaccgagcgcgtgtacatcaagcacctcaaggacatctgt
gagggctatattcgacagtgtcgcaagcacaccggaatgttcactgttgcacaactagcc
accatttttggaaacattgaagatatttacaaattccaaagaaagttcctgaaagacctt
gagaagcagtacaataaagaggaacctcatttaagtgaaataggatcctgctttcttcaa
catcaagagggcttcgccatctattccgagtactgtaacaaccacccgggcgcctgcgcg
gagctgtccaacctgatgaagcagggcaggtaccgacacttcttcgaagcttgccgtctg
ctccagcagatgatcgacatcgccatcgacggcttcctcctcacgccagtgcagaagatc
tgcaagtaccctctgcagctggccgagctgctcaagtacaccacgcccgagcacagtgat
tacaacaacataaaggcagcctatgaagccatgaagaacgtggcgtgtctgatcaatgag
cgcaagcgcaggctggaaagcatagacaagatagcgcggtggcaggtgtccatcgtaggc
tgggaggggctggatatcctagaccgcagctctgagctgatccactccggggagctgacc
aaggtcaccaggcacggcaagagccagcagcggacgttcttcctgttcgaccaccagctg
gtgtcctgcaagaaggacctgctgcgcagggacgtgctctactatagaggccgcacagac
atggatgacgtggagctagtggacctggaggacggccgggacaaggactggaacctcagc
gtgaagaacgccttcaagctcgtcagcaaaagcacggacgaggtgcatctgttctgtgcc
agaaagcaagaggacaaggtgcggtggctgcaggcctgcgaggacgagaggcggcgcgta
cgggaggaccgcgagatgggaatggaaatttcagaaaatcaaaagaaactcgccatgtta
aatgctcaaaaggcgggacatggaaagtcaaaagagcctgttggaagacagttgaaatgg
ccttggccttgggtcaaaagcaaccttctcgattttcatcgtacctaa
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