Neogale vison (American mink): 122907010
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Entry
122907010 CDS
T08764
Symbol
PDS5B
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B isoform X1
KO
K11267
sister chromatid cohesion protein PDS5
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122907010 (PDS5B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nvs03036
]
122907010 (PDS5B)
03400 DNA repair and recombination proteins [BR:
nvs03400
]
122907010 (PDS5B)
Chromosome and associated proteins [BR:
nvs03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
122907010 (PDS5B)
DNA repair and recombination proteins [BR:
nvs03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
122907010 (PDS5B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
EnP1_C
Motif
Other DBs
NCBI-GeneID:
122907010
NCBI-ProteinID:
XP_044105502
LinkDB
All DBs
Position
5:96651848..96848640
Genome browser
AA seq
1449 aa
AA seq
DB search
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQISWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELDKPRSRKKTPVTDSEEKLGMDDLTKLVQEQKPKGSQRGRKRGHTASESD
EQQWPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEAAMKTSKKGTKKKSG
PSAPEEEEEEERQSGNTEQKSKSKQHRTSRRAQQSRAESPESSAVESTQSTPQKGRGRPS
KTPSPSQPKKNVRVGRSKQAATKENDSSEEVDVFQSSSPVNDDIPQEETEEEEVSTVNVR
RRSSKRERR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atggctcattcaaagacaagaaccaatgatggaaaaattacttatcctcctggtgtcaag
gaaatctcagataaaatatctaaagaggagatggtgagacggttaaagatggttgtgaaa
actttcatggatatggaccaggactctgaagaagaaaaggagctatatttaaacctagct
ttacatcttgcttcagattttttcctcaagcatcctgacaaagatgttcgcttactggta
gcctgctgccttgctgatattttcaggatttatgctcctgaagctccttacacgtcccct
gataaactaaaggatatatttatgtttataacaaggcagttaaaggggctggaagataca
aagagcccacagttcaataggtatttttacttacttgagaacattgcttgggtcaagtca
tataacatatgctttgagttggaagatagcaatgaaatttttacccagttatacagaaca
ttattttcagttataaacaatggtcacaatcagaaagttcatatgcacatggtagacctc
atgagttctattatttgtgaaggtgatacagtatctcaggagcttttggatacagttttg
gtaaatctggtacctgcccataagaatttaaacaagcaagcatatgatttggcaaaggct
ttactgaagaggacagctcaagctattgaaccatatattaccaatttttttaatcaggtt
ctgatgcttggaaaaacatctatcagcgatttgtcagagcatgtctttgacttaattttg
gagctctataatattgatagtcatttgctgctctctgttttaccccaacttgaatttaaa
ctaaagagcaatgataatgaagaacgcctacaagttgttaaactattggcaaaaatgttt
ggtgcgaaggattcagaattggcttctcaaaacaaaccactttggcagtgttacttgggc
aggtttaatgacatccatgtaccaatccgcttggaatgtgtgaagtttgctagtcattgt
ctcatgaaccatcctgatttagcaaaggacttaacagaatatcttaaagtgaggtcacat
gaccctgaagaagctattagacatgatgttattgtgtccatagttacagctgctaaaaag
gatattcttctggtcaacgatcacttacttaattttgtgagagagagaacattagacaaa
cggtggagagtgcgcaaagaagccatgatgggacttgcccaaatttataagaagtatgct
ttacaatcagcagctggaaaagatgctgcaaaacagatttcatggatcaaagacaaattg
ctacatatatattatcaaaatagtattgatgatcgattgcttgttgaacgcatctttgcc
caatacatggttccccacaatttggaaactacagaacggatgaagtgtttatattacttg
tatgccacactggatttaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctccgacatcaagtaaaggatttgcttgacttaattaagcaacccaaaacagatgcc
agtgtcaaggcaatattttcaaaagtgatggttattacaagaaatttgccagatcctggt
aaggctcaggatttcatgaagaagttcacacaagtgttggaagatgatgagaaaataaga
aaacagttagaagtactcgttagtccaacatgctcctgcaagcaggctgaaggctgtgtg
cgtgaaataactaagaagttgggcaaccccaaacagcctacaaatcctttcctggagatg
atcaagtttctcttggagaggatagcacctgtacacatagatactgaatctatcagtgct
cttattaagcaagtgaataaatcaatagatggaacagcagatgatgaagatgagggtgtt
ccaactgatcaagccatcagggcaggtcttgaactgcttaaggtactttcatttacacat
cccatctcatttcattctgctgaaacatttgaatctctcctggcttgtctgaaaatggat
gatgaaaaagtagcagaagctgcactccaaatttttaaaaacacaggaagcaaaattgaa
gaagatttcccacatatcagatcagctttgcttcctgttttacatcacaaatctaaaaaa
ggacctccccgccaagccaaatacgctattcattgtatccatgcaatattttctagtaaa
gagacccagtttgcacagatatttgagcctctgcataagagcctagatccaagcaacctg
gaacatctcataacaccgttggttactattgggcatattgctctccttgcacctgatcaa
tttgctgctcctttgaagtccttggtagctactttcattgtgaaagatcttctcatgaat
gatcggctcccaggaaaaaagacaactaaactttgggttccagatgaagaagtttctcct
gagacaatggtcaaaattcaggctattaaaatgatggttcgatggcttcttggaatgaaa
aataatcacagtaaatcaggaacatctaccttaagattgctaactacaatattgcatagt
gatggagacttgacagaacagggaaaaattagtaaaccagatatgtcacgtctgagactt
gctgctgggagtgctattgtgaaactggcacaagaaccttgttatcatgaaatcatcaca
ttagaacagtatcagctctgcgcattagctatcaatgatgaatgctatcaagtaagacaa
gtgtttgctcagaaacttcacaaaggcctttcccgattaaggcttccacttgagtatatg
gcaatctgtgcactttgtgcaaaagatcctgtaaaagagagaagagctcatgctaggcaa
tgtctggtaaaaaatataaatgtgagacgcgagtatctgaagcaacatgcagctgttagt
gaaaaattactgtctcttctaccagaatatgttgtcccatatacaattcatcttttggca
catgacccagattatgtcaaagtacaggatattgaacaacttaaagatgttaaagaatgt
ctttggttcgttctagaaatactaatggctaaaaacgaaaataacagtcatgcatttatc
agaaagatggtagaaaatattaaacaaacaaaagatgcccaaggaccagatgatgcaaaa
atgaatgaaaaactgtacactgtgtgtgatgttgccatgaatatcatcatgtcaaaaagc
accacatacagtttggaatctcctaaagatccagtactaccagctcgttttttcacccaa
cctgacaagaatttcagtaacaccaaaaattatctgcctccagaaatgaaatcgtttttc
actcctggaaaacctaaaacaaccaatgttctaggagctgttaataagccactttcatca
gcaggcaagcagtctcagacaaagtcatctcgaatggaaactgtaagcaatgcaagcagc
agctcaaatccaagctctcctggaagaataaaagggaggcttgatagctctgaaatggat
cacagtgaaaatgaagattacacaatgtcctcacctttgccaggaaaaaaaagtgacaag
agagacgactctgatcttgtaaggtctgaattggacaaacctagaagccggaaaaaaaca
cctgtcacagattcagaagagaaattaggtatggatgacctcactaagttggtacaggaa
cagaaacctaaaggtagtcagcgtggacggaagagaggccacacggcttcagaatcagat
gaacagcagtggcctgaggaaaagaggctcaaagaagatatattagaaaatgaggatgaa
cagaatagtccaccaaagaaaggtaaaagaggtcgaccacctaaacctcttggtggaggg
acaccaaaagaagaagcagcaatgaaaacttctaaaaaaggaaccaaaaaaaaatctgga
ccttcagcaccagaagaagaggaagaagaagaaagacaaagtggaaatacagaacagaag
tcaaagagcaaacagcaccgaacatcaaggagagcacaacagagcagagcagaatctcct
gaaagtagtgcagttgaatccacacaatccacaccacaaaaaggacgaggaagaccatca
aaaacgccatcaccatcacaaccaaaaaaaaatgtccgtgtaggacgctccaaacaagca
gctactaaagaaaatgattcaagtgaagaagtagatgtgtttcagagtagctctcctgtc
aatgatgatattccacaggaagaaacagaggaagaagaagtttctacagtaaatgtacgg
cggcgaagttctaaaagagaaaggcgatga
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