Neogale vison (American mink): 122907047
Help
Entry
122907047 CDS
T08764
Symbol
THSD1
Name
(RefSeq) thrombospondin type-1 domain-containing protein 1 isoform X1
KO
K24433
thrombospondin type-1 domain-containing protein 1
Organism
nvs
Neogale vison (American mink)
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
nvs04990
]
122907047 (THSD1)
Domain-containing proteins not elsewhere classified [BR:
nvs04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
122907047 (THSD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THSD1_D2
THSD1_N
THSD1_D3
TSP_1
TSP1_spondin
TSP1_ADAMTS
TSP1_CCN
Motif
Other DBs
NCBI-GeneID:
122907047
NCBI-ProteinID:
XP_044105579
LinkDB
All DBs
Position
5:complement(104305847..104333284)
Genome browser
AA seq
850 aa
AA seq
DB search
MKQMLKDFSNLLLVVLCDYVLGEAEHLLLEKPGHVALSNNTVSVDFQRFGGANGTLRNVS
VLLLEASTNQTVTAKYLLTNQSQGTLEFECFYFKEAGDYWFTMAPEAAHNGTQVGHWEQR
AFLKVEWPVFHIDLNRTSKAAEGTFQVGLFTHQPLCSFPADQPDILVDVIFTNSLPEART
SPGQPLEIRTSKRTELSQRQWLQFGCAPVGPEAYVTVVLKLFGRDSVITSTGPIDLAQKF
GYKLVMAPELTCESGVEVTVLPPPCIFVQGVITVFKEAPRRPGERTIQLAENSLTLGERR
TIFNCTLFDMGRNKYCFDFGVPSRSHFSTKERECMLIQRNIETWGLWQPWSQCSTTCGDG
VRERRRVCLTSFPSRPGCPGMSSETSLCSLEECAALQPSSASPLQPQGPGKSNNVVTVTG
ISLCLFIIVATVLITLWRKFGRAPKCSTPARHSSIHSPSFRKNSDEENICELSEQRGSFS
DGGDGPAGGPGDAGIPLTYRRGGPLTAEDDASGSESVQSNAQKIIPPLFSYRLAQQQLKE
MKKKGLTETTKVYHVSQSPLTDTAIDAATGPPLDLEGPEEAAANKFRLKSPFVEQPVAAR
PPSRLDLPVCAASCAVSPSQTVIRKSALRHAGGRGALPERSHPRGSHFRRTASFHEARQA
RPFRERSMSTLTPRQAPAYGSRTRTWDQAEERSRPQSRGAAPSPEKPDHFHGAGATRSPL
SPPPKSYSLGQPARKPDLGDCQAGFTASGERTEPHRARRGPSPSHRSVSRKQSSPTAPKE
SYQRVRPLSPSQCRKDKCQSFPAQPEFAFYDNTSFGLTEAEQRMLDLPGYFGSNEEDETT
STLSVEKLVI
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaatgttgaaagacttttcaaatctattgttggtggtactctgtgactatgtt
cttggagaagctgagcatctcctgttggaaaagccaggccatgtagcgctaagcaacaac
acggtgtctgtggatttccagcgtttcggtggtgccaacgggacactgcgcaatgtgtct
gtcctgttgctggaggccagcaccaatcagacggtgaccgccaaatacctcctgaccaac
cagtcccagggcacactggagtttgaatgcttctacttcaaggaggctggagactactgg
ttcacgatggctccggaggcggcccacaatggcactcaagtcggccactgggagcaaaga
gcctttctcaaggtcgaatggcccgtctttcacattgacttgaataggacgtccaaggcg
gcggaaggcaccttccaggtgggccttttcacccatcagccactgtgctccttccctgcg
gaccagcctgacatcttggtggacgtcatctttaccaacagtctgcctgaggcaagaaca
agtccaggtcagccgctggagatcagaaccagcaagaggacagaactctctcaacgtcag
tggcttcagtttggctgtgcgcccgtggggccggaagcctacgtcacggtggtgctgaag
ctgtttggccgagactcggtcattacctccacaggacccattgacctggcccagaaattt
ggatacaaattggtgatggcaccagaactcacgtgtgagtccggggtggaggtgacagtc
ttgcccccaccgtgcatcttcgtccaaggagtgatcacggtcttcaaggaggcccccaga
cgccctggggaaaggaccattcagctagctgaaaacagcctgactttgggagagaggaga
accatattcaactgcactttgtttgacatggggaggaataaatactgctttgactttggc
gttccaagcagaagccatttttccacaaaggagagggagtgcatgctaattcagagaaac
atagaaacttggggactgtggcagccgtggagccagtgtagtaccacgtgtggggatggt
gtcagagagcgacgccgtgtgtgcctgacttccttcccctcccgacctggctgccctgga
atgtcctcggagacctccctgtgttccctggaggagtgtgctgctctccagccatccagc
gcgtctcctcttcagccccagggccccgggaagtccaacaacgtcgtgacggtcacgggc
atttccctgtgcttgttcatcatcgtcgccacggtgctcatcacgctgtggcggaagttc
ggccgcgcccccaaatgcagcaccccggctcgccacagctccatccactcccccagcttc
cggaagaactcggacgaggagaacatctgcgagctgagcgagcagcgcgggagcttctcg
gacgggggcgacgggccggcggggggccccggggacgcgggcatccccctgacctacagg
cgcggcgggccgctgaccgcggaggacgacgcctcgggcagtgagagcgtgcagtccaac
gcgcagaagatcatcccgccgctgttcagctaccgcctcgcccagcagcagctcaaggag
atgaagaagaagggcctgacggaaaccaccaaggtgtaccacgtgtctcagagtcccctg
accgacacggccatcgacgcggccaccggcccccctttggacctggagggccccgaggag
gccgcggccaacaagttccggctcaaatccccgtttgtggagcagccggtggcggccagg
cccccctccaggctggacctcccggtctgtgccgccagctgcgcggtcagccccagccag
accgtgatccgcaagtcggccctgaggcacgcgggtggcagaggggcgctgcccgagagg
agccaccccaggggctcccacttcaggaggaccgcgagcttccacgaagccaggcaggcc
cggccgttccgggagcggagcatgtccaccctgaccccccggcaggccccggcctacggt
tccaggacgcggacctgggaccaggcggaggagcgatctcggcctcagagtcgaggagct
gccccgtcccctgagaaaccggaccatttccacggggcaggtgcaaccagaagtccatta
agtcctccccctaaatcctacagcctggggcagcccgcgaggaaaccagacctgggggat
tgccaggcaggattcacagccagcggtgagagaacggagccgcacagagcccggaggggc
ccgtcccccagtcacaggagtgtctcgaggaagcagtcttctcccacggcccccaaagag
agctaccagagggtgagacctctgagcccttctcagtgtaggaaagacaagtgtcagagc
ttcccagcccagcctgagttcgccttctatgacaatacgtcattcggcctcaccgaggca
gagcagaggatgctggacctcccaggctattttgggtcgaatgaagaggatgaaaccaca
agtacactcagcgtggagaagctggtcatctag
DBGET
integrated database retrieval system
