Neogale vison (American mink): 122907138
Help
Entry
122907138 CDS
T08764
Symbol
PCDH9
Name
(RefSeq) protocadherin-9 isoform X1
KO
K16498
protocadherin delta 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122907138 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
nvs01009
]
122907138 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
nvs04515
]
122907138 (PCDH9)
Protein phosphatases and associated proteins [BR:
nvs01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122907138 (PCDH9)
Cell adhesion molecules [BR:
nvs04515
]
Cadherins
Protocadherins
122907138 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RCR
Big_9
V_ATPase_I
EphA2_TM
MAP17
DUF6249
7tm_3
DUF6377
Motif
Other DBs
NCBI-GeneID:
122907138
NCBI-ProteinID:
XP_044105785
UniProt:
A0A8C7ARH0
LinkDB
All DBs
Position
5:complement(127052598..127948055)
Genome browser
AA seq
1237 aa
AA seq
DB search
MDLRDFYLLAALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSSTGEIFTTSNRIDREKLCAGASYAEENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNGVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RLFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFNQPVIELSVSE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNDNFVLDPYSGVIKSNVSFDREQQSSYTFDVKATDGGQPPRSSTAK
VTINVMDVNDNSPVVISPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPAPTDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGPAPPTTFKPNSPDLAKHYKSASPQPAFHLKPDTPVSVKK
HHVIQELPLDNTFVGGCDTLSKRSSTSSDHFSASECSSQGGFKTKGPLHTRQCNSHSKSD
NIPVTPQKCPSSAGFHIQENEESHYESQRRVTFHLPDGSQESCSDSGLGDHEPVGSGTLI
SHPLPLVQPQDEFYDQASPDKRTEADGNSDPNSDGPLGPRGLAEATEMCTQECLVLGHSD
NCWMPPGLGPYQHPKSPLSTFAPQKEWVKKDKLVNGHTLTRSWKEDSNRNQFNDRKQYGS
NEGHFNNGSHMTDIPLANLKSYKQAGGTIESPKEHQL
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttacctgttggctgctctgattgcctgtttaaggctggattcc
gcaatagctcaagaacttatttacactattagagaggaattgcctgaaaatgtgcccata
ggaaacataccaaaggatctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtttctaaagctggggatgcccctttggtgaaagtatccagt
agcactggggagattttcacaacctccaatagaatagacagagaaaaactctgtgctgga
gcctcttatgctgaggagaatgagtgtttctttgaacttgaggtagtgatcctccccaat
gattttttcaggctgatcaaaataaaaataattgtcaaggataccaatgataatgccccc
atgtttccatctcctgtcatcaatatttccattccagaaaacactttgatcaacagccgc
tttccaattccatcagccacagatcctgacacaggcttcaatggtgttcagcattatgaa
ttgttaaatgggcagagtgtttttggactggatatcgtggaaactccggagggagagaag
tggccacaattgattgttcagcaaaacttggacagagaacagaaagatacctatgtgatg
aaaatcaaagtagaggatggaggcactccacagaaatccagcacagccatactgcaggtc
acagtaagtgatgtaaatgacaacaggccagtgtttaaagagggtcaggtggaggtgcac
attccagagaacgctccggtaggcacctctgtaattcagctccatgccactgatgcagat
ataggcagtaatgctgaaatacggtacatttttggtgcccaggtcgcccctgcaaccaaa
agactctttgctttaaataatactactgggctgataacagttcagaggtccttagatcga
gaggagacggccattcacaaagtgacagtgctggctagcgatggcagctccacaccggct
cgagcaacggttaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacattataagtcccatcaatggcacagtgtatttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacacagatgtgaatggcaaagtgatc
tgttttattgagagagaggtcccatttcatttgaaggcggtgtacgacaaccaatatttg
ttagagacctcctctttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcctctgattccgggaagcccagtttaaatcagactgccctggtaagggttaagcttgag
gacgaaaatgacaacccaccaattttcaaccagcctgtaattgagctgtcagtttctgaa
aacaaccgacgtgggttatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcggacattgtttatcagcttgggccgaatgcctccttctttgatctggaccgaaag
acaggagttttgacagcctccagagtctttgacagagaagaacaagaacgtttcattttt
acagtaactgccagggacaatgggacccctcccctccaaagccaagcggctgtgatagtt
actgttctggacgagaatgacaatagccccaagtttactcataatcattttcaatttttt
gtgtctgagaatctgccaaagtatagtactgtgggggtaatcacagtgacagatgcagat
gctggggagaataaagctgtgactctttccattctaaatgacaatgataattttgtgttg
gatccctattctggagtcataaagtcaaatgtctcctttgatagagagcagcaaagttcc
tacactttcgatgtcaaagccactgacggaggacaaccaccccgctcctctactgcaaaa
gtcactatcaatgtcatggatgtcaatgacaatagcccagttgtcatttctccaccttcc
aacacttcttttaagttggtgcccctctcggccattcctggctctgtggtagcagaagtt
ttcgccgtggatattgacacggggatgaacgccgaactcaagtatacaattgtgagtggg
aacaacaaaggcttgtttcggattgatccagtaacaggtaacattactctggaagagaaa
ccggcgcctactgacgtgggcttgcaccgtttggtggtcaacataagtgacctgggatac
ccaaagtctttgcacacactcgtgcttgtttttctctacgttaacgacactgctgggaat
gcctcctatatctatgacttgattcgcaggactatggagaccccactggacaggaacata
ggggacagtagccagccctatcaaaacgaggactatctcaccatcatgatcgccattgtt
gcaggtgccatggtggtcatagtcgtgatctttgtcactgtcctggtgcgctgtcgccat
gcatccaggtttaaagcagcccagaggagcaagcagggtgctgagtggatgtccccgaac
caggagaacaaacaaaacaagaaaaagaaaaggaagaaaagaaagtctcccaagagctct
cttttgaactttgttacaatcgaagagtccaaacccgatgatgcagtgcacgaacctatc
aacgggaccataagtctgccagctgagctggaggagcaaagcataggaaggtttgactgg
ggcccggcccctcccaccaccttcaagcctaacagccctgacctggcaaagcactacaaa
tctgcttctccacagcctgctttccatcttaaaccagacactccagtctccgtgaaaaag
catcatgtgattcaggaactccctttggacaacacctttgtcgggggttgtgacaccctt
tcgaaacgctcttccactagttcagatcacttcagtgcctcagagtgcagttcccaagga
ggcttcaagacaaagggccccttacacaccagacagtgtaactcacacagcaaaagtgac
aatattcctgtcactcctcagaaatgtcccagctctgcgggtttccacattcaggagaat
gaagaaagccattacgagtcgcagcgccgggttacgtttcacctccccgatggctcccag
gaaagctgcagtgacagtggtctaggagaccacgagccggtgggtagtggcaccctgatc
tcacaccctcttcctctggttcagccacaggacgaattctacgaccaggcctctccggac
aagaggaccgaagcagatggcaactctgaccccaactctgatgggcctttgggtccccga
ggattagctgaagctacagagatgtgcactcaagagtgcttggttttgggtcactctgat
aattgctggatgcctcctggcttgggtccatatcaacaccctaaatctcctctctcaacc
tttgcaccccagaaagaatgggtcaagaaggacaagcttgtgaatgggcacacccttacc
agatcctggaaagaagatagcaacaggaaccagttcaatgaccgtaagcagtatggctcc
aatgaaggccatttcaacaatggcagccacatgacagacattcctctggcaaatctgaag
tcttataagcaagcgggaggtactattgagagtccgaaggagcaccaactctaa
DBGET
integrated database retrieval system
