Neogale vison (American mink): 122907241
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Entry
122907241 CDS
T08764
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04151
PI3K-Akt signaling pathway
nvs04382
Cornified envelope formation
nvs04510
Focal adhesion
nvs04512
ECM-receptor interaction
nvs04518
Integrin signaling
nvs04820
Cytoskeleton in muscle cells
nvs04926
Relaxin signaling pathway
nvs04933
AGE-RAGE signaling pathway in diabetic complications
nvs04974
Protein digestion and absorption
nvs05146
Amoebiasis
nvs05165
Human papillomavirus infection
nvs05200
Pathways in cancer
nvs05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
122907241 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122907241 (COL4A2)
04518 Integrin signaling
122907241 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122907241 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
122907241 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
122907241 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
122907241 (COL4A2)
09158 Development and regeneration
04382 Cornified envelope formation
122907241 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
122907241 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
122907241 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
122907241 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
122907241 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
122907241 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122907241 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
nvs00536
]
122907241 (COL4A2)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
122907241 (COL4A2)
Glycosaminoglycan binding proteins [BR:
nvs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122907241 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
122907241
NCBI-ProteinID:
XP_044106028
LinkDB
All DBs
Position
5:164658028..164813564
Genome browser
AA seq
1711 aa
AA seq
DB search
MDRHQCSASSPALRRWLLLGAVTVGLLAQSVLAGVKKFDVPCGGRDCSGGCQCYPEKGGR
GQPGPVGPQGYTGPPGLQGFPGLQGRKGDKGERGSPGITGPKGDVGARGVSGFPGADGIP
GHPGQGGPRGPPGYDGCNGTRGDVGQQGPAGSPGFHGPPGPQGPKGQKGEPYALSSVERD
RYRGEPGEPGLVGFQGPPGRPGPIGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKG
EKGDIGVPGPNGIVWDFHPAVGPTKESFHPEQYKGEKGSAGEPGVKGVSMKGEEGVMGFS
GPRGTAGFDGEKGFPGQKGSRGPAGYQGPSGPPGPKGEAGDRGPPGPPAYFPHPSLTKGA
RGDPGFPGTHGEPGSRGEPGDPGPPGLPGTSVTDEDGKRGLPGEMGPKGFIGDPGVPALY
PGPPGTDGRPGLQGPPGPAGPPGPDGFLFGLKGTEGKVGYPGPSGFPGARGQKGWKGDAG
DCKCAEGDQFVKGLPGFPGPKGLPGINGEPGRKGSQGDPGQHGIPGFPGFKGAPGHVGPP
GPKGLKGDSRAVTTKGERGHPGVPGVPGLKGDDGVPGRDGLDGFPGLPGPPGDGIKGPPG
DSGYPGAPGTKGAAGDRGPQGLGLPGPKGERGFPGDAGLPGPPGFPGPPGPPGPPGQIDC
DTGVKRPIGGDGQETVQPGCVGGPKGSPGLPGPPGPTGAKGLQGTPGLSGADGAPGLKGL
PGDPGREGFPGPPGFVGPRGSKGTAGLPGADGLPGPSGLPGPIGPPGDRGLPGEVLGAQP
GPRGDAGVPGQPGLRGPPGERGPPGFRGSQGMPGMPGLKGQPGFPGPSGQPGLPGPPGQH
GFPGAPGREGPLGQPGTPGHGGLPGDRGDPGDTGVPGPVGMKGLSGDRGDPGLLGERGPR
GSPGFKGMSGMPGVPGQKGGRGSPGMDGFQGMVGLKGRPGLPGHKGEAGFYGIPGLKGLA
GEPGVKGSRGDPGPPGPPPIIQPGMKDIKGEKGDEGPMGLKGYLGLKGVPGMPGVPGLSG
IPGLPGKPGHIKGVKGDTGVPGVPGLPGFPGVPGPPGIIGFPGFTGSRGDKGAPGRAGLY
GEVGPTGDFGDIGDTINLPGRPGLKGEQGVAGAPGLKGFFGEKGTVGEVGFPGITGMPGV
QGPPGAKGQTGFPGLTGLQGPQGEPGRAGRPGDKGDFGWPGVPGSPGFPGIQGVSGLHGL
PGTKGFPGSPGADTHGDPGFPGPAGDRGDPGEPNTRPGPFGAPGQKGERGDPGERGPIGS
PGRQGFPGVTPPSNVSGLPGDKGAPGIFGLEGYRGPPGPPGPAALPGSKGDEGNPGAPGN
PGTKGWGGDPGPQGRPGVFGLPGEKGPRGDPGFMGNTGATGSVGDRGPKGPKGDRGLPGA
PGSVGAPGIAGIPQRIAIQPGPVGPQGRRGPPGAQGEMGPQGPPGEPGFRGAPGKAGPQG
RGGVSAVPGFRGDQGPMGQQGPVGQEGEPGRPGTPGLPGMPGRSVSIGYLLVKHSQTDRE
PMCPVGMNKLWGGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRN
DKSYWLSTTAPLPMMPVAEDDIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWI
GYSFLMHTAAGDEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPE
PSFQGAPSADTLKAGLIRTHISRCQVCMKNL
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
atggacagacaccagtgctcggcgtccagccctgccctgcggcggtggctgctgctgggg
gctgtgaccgtggggctcctggcccagagcgtcctggcgggcgtgaagaagtttgacgtg
ccgtgtggagggagagactgcagcgggggctgccagtgctaccccgagaagggaggacgg
ggccagcccgggccagtgggcccccaggggtacaccgggcccccaggcctgcaggggttc
ccaggactgcagggccgcaaaggtgacaagggcgagcgggggtcacccgggatcacagga
ccgaaaggagatgtgggagcgagaggcgtttctggattccctggagccgatggaattccc
ggacaccccggccaaggcggcccccgagggccacccggctatgacggctgcaacgggacc
agaggagacgtgggccagcagggacccgccggctccccgggcttccacggccctcccggg
ccccaaggacccaaaggacagaaaggcgagccctatgccctgtccagcgtggagcgcgac
agatacaggggggaacccggagagcctggcttggttggcttccagggcccccccggccgg
cctgggcctataggacagatgggtccagttggagctccaggaagaccgggcccgcctgga
ccccctggaccaaaaggacagccaggcaacagaggacttggcttttatggagaaaagggt
gaaaagggcgacatcggcgtgccgggccccaacgggattgtgtgggatttccacccggcc
gtcggacccacgaaggagtcgttccacccggaacagtataagggtgaaaaggggagcgct
ggggagccgggagtaaaaggcgtctccatgaagggagaagaaggagtcatgggcttctca
ggcccgcggggcacggccggcttcgacggcgagaaaggtttcccgggacagaaggggagc
agaggaccggccggttatcaaggccccagcggacccccaggacccaagggagaagcgggc
gaccgcggcccccccggccccccggcctacttccctcacccctccctcactaaaggtgcc
cgaggtgacccaggattcccagggacccatggggaaccaggaagccggggcgaaccagga
gacccgggccccccgggcctccccggcacatcagtcacagatgaagatgggaagagagga
ttaccaggtgaaatgggtcccaaaggcttcataggagaccccggcgtccccgcgctgtac
cccggccctccgggcactgatggaaggccaggactccagggacccccagggcctgccgga
ccgccaggaccagatggtttccttttcggccttaaaggaacagaagggaaggtgggctac
cctgggccttctggcttccctggggctcgcggacagaaaggatggaaaggggacgccggg
gactgtaagtgcgcggagggcgatcagttcgtgaaggggctcccggggttcccaggaccc
aagggcctacccggcatcaatggagagccaggaaggaaagggagccaaggagaccctggc
cagcacggcatccccgggttccccgggttcaagggcgcacctggccacgtaggacctccc
gggcccaaagggctgaagggcgactcccgagcagtcaccaccaaaggtgagcggggacat
ccgggggtcccaggcgtgccggggctgaaaggggacgacggggtccccgggcgcgacggg
ctggacggattcccaggcctcccaggccctccgggtgatggcatcaaaggccccccagga
gactcaggttacccaggagcaccgggcacgaagggcgctgcaggagacaggggcccccaa
ggactgggcctccccggccccaaaggcgagcgtggtttccccggagacgccggactaccc
ggaccaccaggctttcccggtccccctggcccccccggtccccctggacaaatagactgt
gacacaggtgtgaaaaggcccatcggaggcgacggacaggagacggtgcagccaggttgc
gtcggaggccccaaggggtcgccaggcctgccgggacccccaggccccacaggggccaag
ggcctccaagggacaccaggactctcgggagcagacggagcaccagggctcaagggtctc
cccggagacccgggccgtgaaggattcccaggacccccagggttcgtggggccccgagga
tccaaaggtacagcgggccttcctggtgcggacggtctcccgggtccctccggtctgccg
ggccccatcgggcccccaggggacaggggcctgcccggagaagttctgggagcccaacct
gggccccgaggagatgctggggtgcctggacagcctggcctgagaggccctccgggagag
aggggcccacctggattcaggggaagccagggaatgccgggaatgccaggcctgaagggc
cagccaggcttcccaggaccgtcgggccagccaggcctgcccgggccgccaggacagcac
ggcttcccaggagctccaggccgggaggggcccttggggcagccaggcacccctggtcac
ggaggtttgcctggagacagaggggacccaggggacacaggtgtccctggccccgtgggc
atgaagggtctctccggcgatagaggtgaccctggtttgctgggggagagaggcccccga
ggaagtcctgggttcaaaggaatgagcggaatgcctggtgtccccggacagaaaggcggg
agaggttcgcccgggatggacggtttccaaggcatggtcgggctcaaaggaagacccggg
cttccgggacacaaaggagaggccggattttatggaattccgggactgaagggcctggca
ggggagccgggtgtgaaaggcagccgtggagaccccggacccccagggccacctcccatc
atccagccaggaatgaaggacatcaaaggggagaaaggcgatgaggggcccatggggctg
aaagggtacctgggcctgaaaggtgttcccggaatgccgggcgtccccgggctgtcaggc
atccccgggttgccagggaagccgggccacatcaaaggagtcaaaggagacactggcgtc
cctggagtgccgggtttaccaggattccccggcgtgcccggcccccccggcatcatcggt
tttcccgggttcacaggaagtcggggcgacaagggagctccggggagagcgggcctgtat
ggcgaggtcggccccaccggtgacttcggtgacatcggagacaccatcaatctgccagga
aggcctgggctgaagggggagcagggcgtggccggagccccagggctgaagggcttcttc
ggggagaaaggaacagtgggcgaagtcggctttcccgggataacaggcatgcccggcgtc
caaggccctcccggagccaaagggcaaacaggctttccaggactgacaggcctgcagggg
ccccagggagagccagggcgggcaggacggcccggcgacaaaggagacttcggctggccg
ggggttccaggctccccaggttttcctggcatccaaggcgtcagcggcttgcacggcctg
ccaggcaccaaaggcttcccaggatccccaggtgcggacacccacggcgaccccggcttc
cctggtcctgccggggacaggggtgacccaggagagcccaacacccgcccaggccctttc
ggagccccaggacagaaaggggagcgaggagacccaggggaacgaggccccatcgggagc
cccggacgtcaggggttcccaggcgtcaccccaccgtccaacgtgtctggcttacctggt
gacaaaggggcgccgggcatatttggcctggaaggttaccgagggccccccgggccgcct
gggcctgctgctcttcctggaagcaaaggagacgaggggaacccaggagctccgggaaac
cccgggaccaaaggatggggcggcgaccccgggccccagggccggcctggcgtgttcggt
ctcccgggagagaaagggcccagaggggacccaggattcatgggaaacacaggagccacc
gggagtgtaggcgaccgaggccctaagggacccaagggagaccgaggactcccaggtgcc
cccggttccgtgggagcccctgggattgcaggaattccccagaggattgccatccagccg
gggccagtgggtccacagggaaggagaggccccccgggggcgcagggcgagatggggccc
cagggccccccaggagaaccaggtttccgcggggctcccgggaaggcagggccccagggg
agaggcggtgtgtctgctgtgcccggattccgaggagaccaggggcccatgggacagcag
gggccggtgggccaggaaggggagccgggccgcccagggacccccggcctgccaggcatg
ccgggccgcagcgtcagcatcgggtacctgctggtgaagcacagccagacggaccgcgag
cccatgtgccccgtgggcatgaacaagctgtggggcgggtacagcctgctgtacttcgag
ggccaggagaaagcccacaaccaggacctggggctggcaggctcctgcctggcgcggttc
agcaccatgcccttcctgtattgcaacccgggtgacgtgtgctactacgccagccggaat
gacaagtcctactggctgtccaccaccgccccgctgcccatgatgcccgtggctgaggat
gacatcaagccctacatcagccgctgctccgtgtgtgaggccccagctgtcgccatagca
gtgcacagccaagacgtctccatcccccactgcccagctggatggcggagtctgtggatt
ggatactccttcctcatgcacacggccgcgggcgacgagggcggtggccagtcgctggtg
tcgccgggcagctgcctggaggacttccgcgccacgcccttcattgagtgcaacgggggc
cgcgggacctgccactactacgccaacaagtacagcttctggctcaccaccatccccgag
cccagcttccagggcgcgccgtccgccgacaccctcaaggccgggctcatccgcacccac
atcagccgctgccaggtgtgcatgaagaacctgtga
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