Neogale vison (American mink): 122907261
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Entry
122907261 CDS
T08764
Symbol
LAMP1
Name
(RefSeq) lysosome-associated membrane glycoprotein 1 isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
nvs
Neogale vison (American mink)
Pathway
nvs03272
Virion - Hepatitis viruses
nvs03273
Virion - Lassa virus and SFTS virus
nvs04140
Autophagy - animal
nvs04142
Lysosome biogenesis
nvs04145
Phagocytosis
nvs05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
122907261 (LAMP1)
03272 Virion - Hepatitis viruses
122907261 (LAMP1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122907261 (LAMP1)
04142 Lysosome biogenesis
122907261 (LAMP1)
04140 Autophagy - animal
122907261 (LAMP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
122907261 (LAMP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nvs04131
]
122907261 (LAMP1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nvs04147
]
122907261 (LAMP1)
04090 CD molecules [BR:
nvs04090
]
122907261 (LAMP1)
Membrane trafficking [BR:
nvs04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
122907261 (LAMP1)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
122907261 (LAMP1)
Other autophagy associated proteins
RNautophagy/DNautophagy
122907261 (LAMP1)
Exosome [BR:
nvs04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
122907261 (LAMP1)
CD molecules [BR:
nvs04090
]
Proteins
122907261 (LAMP1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
TSKS
VAS1_LD
DDE_Tnp_IS1595
Motif
Other DBs
NCBI-GeneID:
122907261
NCBI-ProteinID:
XP_044106094
LinkDB
All DBs
Position
5:166513251..166530794
Genome browser
AA seq
413 aa
AA seq
DB search
MAALGGARRRSLLLLLLAGLVHGAAAMFVVKDASGTACIMANFSAAFTASYDTGSGPKNV
TFDLPSDAAVSNSSSCGGERASDPSLRIAFGRGHALALNFTRNATRYSVRLMTFIYNLSD
TQIFPNASSKDTQTVESATDIRADINTKYRCVSTDQVHMHNVTVTLRDATIQAYLANSSF
SKEETRCEQDGPFPTTAPPPPPQPSPSPTPESPSVYKYNVSGVNGTCLLASMGLQLNVTY
RKEDNTTVTRVFGINPNKTTAGGSCGPQLVTLELRSDSVSLLAFQFGMNASTSRYFLQGI
QLNMTLPDAREPTFKASNSSLRALQASIGNSYKCNAEERVQVTDAFSVNIFKVWVQAFQV
QGDKFGSVEECQLDENSMLIPIAVGGALAGLVLIVLIAYLIGRKRSHAGYQTI
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctcggcggcgctcggcggcggtctctgctcctgctgctgctcgcaggcctc
gtacatggcgcagcagcgatgtttgtggtgaaggatgccagcgggacagcctgcatcatg
gccaacttctccgctgccttcacggccagctatgacaccgggagcgggcctaagaacgta
accttcgacctgccgtctgatgcagccgtatcaaatagcagctcctgcggcggagagcgc
gcgtcggaccccagtctcaggatcgcttttggaagaggacatgcactggccctcaatttc
acaagaaatgcaacacgttacagtgttcggctgatgacttttatttataacttatctgac
acacagattttccccaatgcaagctccaaggatacccagactgtggaatctgccactgac
atccgggcggacataaataccaagtacaggtgtgtgagcaccgaccaggtccacatgcac
aacgtcaccgtcacactccgcgacgccaccatccaagcgtatcttgccaacagcagcttc
agcaaggaagagacgcgctgtgagcaagacgggcctttcccaacaacggcgccgccaccg
cctccccagccttcgccatccccaacgcccgagagcccctccgtgtacaagtacaacgtg
agcggcgtcaacgggacctgcctgctggccagcatgggcctgcagctgaacgtcacctac
aggaaggaggacaacacgaccgtgacaagagtgttcggcatcaaccccaataagaccacc
gccggggggagctgcggcccccagctggtgaccctggagctgcgcagcgacagcgtctcc
ctcctggccttccagtttgggatgaacgcgagtacaagccggtatttcctgcaaggaatc
cagctgaatatgactcttcctgacgccagagagcccacctttaaggcctccaacagctct
ctgagggcccttcaggcctccatcgggaactcgtacaagtgtaacgctgaggagcgtgtg
caggtcacggacgccttttccgtcaacatcttcaaagtgtgggtccaggcattccaggtg
caaggtgacaagtttgggtctgtggaggagtgccagctggacgagaacagcatgctgatc
cccatcgccgtggggggcgccctggccgggctggtcctcatcgtcctcatcgcctacctc
attggcaggaagaggagccacgccggataccagaccatctag
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