Neogale vison (American mink): 122907539
Help
Entry
122907539 CDS
T08764
Symbol
GRIN2C
Name
(RefSeq) glutamate receptor ionotropic, NMDA 2C isoform X1
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04020
Calcium signaling pathway
nvs04024
cAMP signaling pathway
nvs04080
Neuroactive ligand-receptor interaction
nvs04082
Neuroactive ligand signaling
nvs04713
Circadian entrainment
nvs04720
Long-term potentiation
nvs04724
Glutamatergic synapse
nvs05010
Alzheimer disease
nvs05014
Amyotrophic lateral sclerosis
nvs05017
Spinocerebellar ataxia
nvs05020
Prion disease
nvs05022
Pathways of neurodegeneration - multiple diseases
nvs05030
Cocaine addiction
nvs05031
Amphetamine addiction
nvs05033
Nicotine addiction
nvs05034
Alcoholism
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122907539 (GRIN2C)
04024 cAMP signaling pathway
122907539 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122907539 (GRIN2C)
04082 Neuroactive ligand signaling
122907539 (GRIN2C)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
122907539 (GRIN2C)
04720 Long-term potentiation
122907539 (GRIN2C)
09159 Environmental adaptation
04713 Circadian entrainment
122907539 (GRIN2C)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
122907539 (GRIN2C)
05014 Amyotrophic lateral sclerosis
122907539 (GRIN2C)
05017 Spinocerebellar ataxia
122907539 (GRIN2C)
05020 Prion disease
122907539 (GRIN2C)
05022 Pathways of neurodegeneration - multiple diseases
122907539 (GRIN2C)
09165 Substance dependence
05030 Cocaine addiction
122907539 (GRIN2C)
05031 Amphetamine addiction
122907539 (GRIN2C)
05033 Nicotine addiction
122907539 (GRIN2C)
05034 Alcoholism
122907539 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvs04040
]
122907539 (GRIN2C)
Ion channels [BR:
nvs04040
]
Ligand-gated channels
Glutamate (ionotropic)
122907539 (GRIN2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
NMDAR2_C
WIR1
AliA_AliB
Motif
Other DBs
NCBI-GeneID:
122907539
NCBI-ProteinID:
XP_044106279
LinkDB
All DBs
Position
5:6217249..6228726
Genome browser
AA seq
1200 aa
AA seq
DB search
MGGALGPALLLTSLLGAWAGLGPGQGEQAVTVAVVFGSSGPPHAQVRTRLTSQSFMDLPL
EIQPLTVGVNNTNPSSLLTQICGLLGAARVHGIVFEDNVGTEAVAQILDFISSQTHVPIL
SISGGSAVVLTPKEPGSAFLQLGVSLEQQLQVLFKVLEEYDWSAFAVITSLHPGHALFLE
GVRAAADASYLSWRLLDVLTLELGPGGQRAHIQRLLRQVDAPVLVAYCSREEAEVLFAEA
AQAGLVGPGHVWLVPSLALGSTDAPPAVFPVGLISVVTESWRLSLRQKVRDGVAILALGA
HSYQRQHGALPSPAGDCRGHPGPVSPAREAFYRHLLNVTWEGRDFSFSPGGYLVQPTMVV
IALNRHRLWEMVGRWDHGVLHMKYPVWPRYSASLQPVVDSRHVTVATLEERPFVIVESPD
PGTGGCVPNTVPCRRQNNQTFSSGDTAPYTKLCCKGFCIDILKKLAKVVKFSYDLYLVTN
GKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNG
TVSPSAFLEPYSPSVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTSGKKSGGPSFTIG
KSVWLLWALVFNNSVPIENPRGTTSKIMVLVWAFFAVIFLASYTANLAAFMIQEQYIDTV
SGLSDKKFQRPQDQYPPFRFGTVPNGSTERNIRSNYRDMHTHMVKFNQRSVEDALTSLKM
GKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQF
LGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVY
WKLRHSVPSTPRLDFLLAFSRGIYSCFSGVQSLASPTRPPSPDLTAGSAQASVLKMLQAA
RDMVTTAGVSSSLDRAARTIESWGSGRRAPPPPACPGPRPPTPGPSPEPSPTGWGQGGGG
RAAPGRRAPQPPGRPPTPRPSLPDVSWVSGWAAREARRQLPAGRCGRLLSGSERRALPER
PLSPQRCHYSSFPRADRSGRPFLPLFPERGYRPRHASLPSSVAEAFAWPRSLPAGCGHPA
CAHLAQAPAMRLPSYREACQEGVWARVPAWPHRQHACLHAHAHLPLCWGALCSPLPPCAS
HSPWLTGAWGPPGHRGRTLGLSTGYRDSAGLEEVSRVACGTHGFPGPCTWRRISSLESEV
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcgctctggggccggccctgctgctcacctcactcctcggggcctgggcaggg
ctgggcccggggcagggtgagcaagccgtgacagtggccgtggtgttcggcagctcgggg
ccaccacacgcccaagttcgcacccgcctcacctcccagagcttcatggacctgcctctg
gagatccagccactcaccgtgggcgtcaacaacaccaaccccagcagcctcctcacccag
atctgcgggctcctcggggcggcgcgcgtccacggcattgtctttgaggacaacgtgggc
accgaggccgtggcgcagatcctggacttcatctcctcccagacccatgtgcctatcctc
agcatcagtgggggctcggctgtggtcctcacccccaaggagccgggctccgccttcctg
cagctgggcgtgtccctggagcagcagctgcaggtgctgttcaaggtgctggaggagtac
gactggagcgcgttcgccgtgatcaccagcctgcacccggggcacgcgctcttcctggag
ggggtgcgcgccgcggccgacgccagctacctgagctggcggctgctggacgtgctcacg
ctggagctgggcccgggcgggcagcgcgcgcacatccagcgcctgctgcgccaggtcgac
gccccggtgctggtggcctactgctcgcgcgaggaggccgaggtgctcttcgcggaggcg
gcgcaggccggtctggtggggcccggacacgtgtggctggtgcccagcctggcgctgggc
agcaccgacgcgccccccgccgtcttccccgtgggcctcatcagcgttgtcaccgagagc
tggcgcctcagcctccgccagaaggtccgcgacggcgtggccatcctggccctgggcgcc
cacagctaccagcggcagcatggtgccctgccctccccggctggggactgccgtggccac
cccgggcccgtcagccctgcccgggaggccttctacaggcacctactgaatgtcacctgg
gagggccgagacttctccttcagcccgggtgggtacctcgtccagcccaccatggttgtg
atcgccctcaaccgccaccgcctctgggagatggtggggcgctgggaccacggcgtcctc
cacatgaagtacccggtgtggcctcgctatagcgcgtctctccagcctgttgtggacagc
cggcacgtgacagtggccacgctggaagagcggccctttgtcattgtggagagccctgac
cccggcacgggcggctgtgtgcccaacaccgtgccttgccgcaggcagaacaaccaaacc
ttcagcagcggtgacacagccccctacaccaagctttgctgtaagggtttctgcattgac
atcctcaagaagctggccaaggtggtcaagttctcctatgacctgtacctggtgaccaat
ggcaagcatggcaagagggttcggggcgtgtggaacggcatgatcggggaggtgtactac
aagcgggcagacatggccatcggctccctcaccatcaacgaggagcgctccgagatcgtg
gacttctctgtgcccttcgtggagacgggcatcagcgtgatggtggcccgcagcaatggc
accgtctccccgtcggccttcctggagccctacagcccttccgtgtgggtgatgatgttc
gttatgtgtctcactgtggtggccatcacggtcttcatgtttgagtacttcagcccggtc
agctacaaccagaacctcaccagtggcaagaagtctgggggcccatccttcaccatcggc
aagtctgtgtggctgctgtgggcgctggtcttcaacaactcggtgcccatcgagaacccc
cgaggcaccaccagcaagatcatggtcctagtctgggccttctttgctgtcatcttcctc
gccagctacaccgccaaccttgctgccttcatgatccaggagcaatacattgacactgtg
tccggcctcagtgataagaagtttcagcggcctcaagatcagtacccacccttccgcttt
ggcacggtgcccaatggcagcacggaacggaacatccgcagcaactaccgagacatgcac
acccacatggtcaagttcaaccagcggtcggtggaagacgccctcaccagcctcaagatg
gggaagctggacgccttcatctatgatgctgctgtcctcaactacatggcgggcaaggac
gagggctgcaagctggtcaccattggctctggcaaggtctttgctaccactggctacggc
atcgccatgcagaaggactcccactggaaacgggccatagacttggcgctcctgcagttc
ttgggggatggggagacccagaagctggagacagtgtggctctcagggatctgccagaac
gagaagaacgaggtgatgagcagtaagctggacatcgacaacatggctggcgtcttctac
atgctgctggtggccatggggctggccctgctggtctttgcctgggagcacctggtctac
tggaaactgcgccactcagtgcccagcacgcctcggctggacttcctgctggccttcagc
aggggcatctacagctgcttcagcggggtgcagagcctggccagccccacgcggcccccc
agcccggacctgaccgccggctcggcccaggccagcgtgctcaagatgctgcaggcggca
cgcgacatggtgaccacggcgggcgtgagcagctccctggaccgcgccgcgcgcaccatc
gagagttggggaagcggccgccgcgcgcccccgccgcccgcttgccccggcccgcggccg
cccacccccggcccgtcccccgagcccagccccacgggctggggacagggaggcgggggc
cgcgccgcgccggggcgcagagccccgcagcccccgggccgccccccgacgcccaggccg
tcgctgcccgacgtctcctgggtgtcgggctgggccgctcgggaggcgcggcggcagttg
ccggcagggcgctgcgggcggctcctctcgggctccgagcggcgcgcgctcccagagcgc
cccctgtctccgcagcgctgccactacagctccttccctcgagccgaccggtccgggcgc
cccttcctcccgctcttcccggagcggggctaccgcccgcgccacgcttccctgcccagc
tctgtggcggaggccttcgcctggcccaggtctctgcccgcggggtgcggccacccggcc
tgcgcgcacttggcgcaggcgccggcgatgcggctgccgtcctaccgggaggcctgccag
gagggcgtgtgggccagggtccccgcctggcctcacagacagcacgcctgcctgcacgcc
cacgcccacctgccgctttgctggggggccttgtgctcccctttgcccccctgtgccagc
cacagcccctggctcactggggcctgggggcctccggggcacaggggcaggaccctgggg
ctgagcacaggctacagggacagtgcggggctggaagaggtcagcagggtggcctgtggg
acacacggcttccctggaccttgtacctggaggcggatctccagcttagagtcagaagtg
tga
DBGET
integrated database retrieval system
