Neogale vison (American mink): 122908217
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Entry
122908217 CDS
T08764
Symbol
LSS
Name
(RefSeq) lanosterol synthase isoform X1
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
nvs
Neogale vison (American mink)
Pathway
nvs00100
Steroid biosynthesis
nvs01100
Metabolic pathways
Module
nvs_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
122908217 (LSS)
Enzymes [BR:
nvs01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
122908217 (LSS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Motif
Other DBs
NCBI-GeneID:
122908217
NCBI-ProteinID:
XP_044106694
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All DBs
Position
6:424559..451484
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AA seq
733 aa
AA seq
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MTEGTCLRRRGGPHKTEPATDLRRWRLRSERGRQTWTYLAREEEPGRGPTALEAHALGLD
PESHFQALPKADTARAAALNGVAFYVGLQAEDGHWAGDYGGPLFLLPGLLITCYVAQIPL
PAGCREEMERYLRSVQLPDGGWGLHVEGESTVFGTALNYVSLRILGVGPDDPDLVRARNL
LHKKGGALLIPSWGKFWLAVLNVYSWEGLNTLFPEMWLFPDWVPAHPSTLWCHCRQVYLP
MSYCYAIRLSAKEDPLIQSLRQELYVEDYAGIDWPAHRSSVAPEELYTPHSRLLRVVYAF
LNLYERHHSTSLRRRAVQKLYEHIAADDRFSRCLSIGPISKTINMLVRWYVDGPASSIFR
EHISRIPDYLWLGLDGMKMQGTNGSQVWDTSFAIQALLEAGAQHRPEFSSPLRQAHEFLR
LSQVPDNPPDYQKYYRQMSKGGFPFSTLDCGWIVADCTAEALKSILLLQEKCPFVTKHVT
RERLCDAVAVLLNMRNSDGGFATYETKRGGHLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALKLFHERFPDHRAKEVRETLEQGLEFCRQKQRADGSWEGSWGVCFTYGTWFGLEAFACM
GQTYRSGAVCAAVSQACDFLLSRQMADGGWGEDFESCEQRRYVQSATSQTHNTCWALMGL
MAVRHPCVEALERGISCLLRKQLPSGDWPQENIAGVFNKSCAINYTSYRNVFPIWALGRF
SRLYPESVLAGQP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggagggcacgtgcctgcgtcgccgcggcggcccccacaagacggagccggcgacc
gacctccgccgctggcgcctgcgcagcgagcgcggccggcagacgtggacgtacctggcg
cgggaggaggagccgggccgcgggcccaccgcgctggaggcgcacgcgctggggctggac
cccgagagtcacttccaggccttgcccaaagcggacaccgcccgggcggcggctctgaac
ggggtcgcgttctacgtggggctgcaggccgaggacgggcactgggccggggactacggc
ggcccgctcttcctcctgccgggcctcctgatcacctgctatgtggcccagatccctttg
cccgcgggctgtagagaggagatggagcggtacctgcggtcagtgcagctccccgacggc
ggctggggcctgcacgtggagggcgagtccacggtgttcgggactgcactcaactatgtg
tctctgagaatcctgggtgtcgggcctgatgatcccgacttggtacgagcccggaacctt
cttcacaagaaaggtggtgctctgctcatcccttcctgggggaagttctggttggctgtc
ctgaacgtttacagctgggaaggtctcaacactctgttcccggagatgtggctgtttcct
gactgggtccccgcgcacccctccacgctctggtgccattgccgacaggtctacctgccc
atgagctactgctacgccatccggctgagcgcgaaggaggacccgctgatccagagcctc
cgccaggagctctacgtggaggactacgcgggcatcgactggccggcgcacaggagcagc
gtggcccccgaggagctgtacacgccgcacagccggctgctccgtgtggtgtacgcattc
ctcaacctgtacgagcgccaccacagcacgagcctgcggcggcgggccgtgcagaagctg
tacgagcacatcgcggcagacgaccgcttctccaggtgcctcagcattggcccgatctcg
aaaaccatcaacatgctcgtgcgctggtatgtggacgggccggcctcttccatcttccgg
gagcacatctccaggattcctgattacctctggctgggtctcgatggcatgaaaatgcag
ggcaccaatggctcgcaggtgtgggacacctcatttgccatccaggctctgctggaggcg
ggggcacagcacaggcccgagttttcgtctcccctgcggcaggcgcacgagtttctccga
ctctcacaggtcccagacaaccctcctgactaccagaagtactaccgccagatgagcaag
gggggcttccctttcagcacgctggattgtggctggattgttgccgactgcaccgctgag
gccttgaagtccatcctcctcctgcaggaaaagtgtccctttgtcaccaagcacgtcacg
cgtgagcggctctgtgacgctgttgctgtgttgctgaacatgaggaattctgatggaggg
tttgccacctatgagactaagcgtggggggcacttgctggagctgctgaacccctcggag
gtctttggggacatcatgattgactacacctacgtggagtgcacctcggccgtgatgcag
gcactgaagcttttccatgagcgcttcccggaccacagggccaaggaggtcagggagacg
ctcgagcagggcctggagttctgtcggcagaagcagcgggccgatggctcctgggaaggc
tcctggggggtttgcttcacctacggcacctggtttgggctagaagctttcgcctgcatg
gggcagacttaccgcagcggggctgtgtgcgcggcggtctcccaggcctgcgacttcctg
ctctccaggcagatggcggatggcggctggggggaggacttcgagtcctgtgagcagcgt
cgctacgtgcagagcgccacgtcccagacccataacacgtgctgggccctgatggggctg
atggccgtcaggcacccctgcgtggaggccctggagagaggaatcagctgtctgcttcgg
aagcagctccccagtggcgactggccccaggagaacatcgccggcgtcttcaacaagtcc
tgtgccatcaactacacgagctacaggaacgtcttccccatctgggcccttggccgcttc
tcccgcctgtaccccgagagtgtcctcgctggccagccttga
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