Neogale vison (American mink): 122908564
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Entry
122908564 CDS
T08764
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
nvs
Neogale vison (American mink)
Pathway
nvs04360
Axon guidance
nvs04724
Glutamatergic synapse
nvs04726
Serotonergic synapse
nvs04929
GnRH secretion
nvs04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
nvs00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
122908564 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
122908564 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
122908564 (TRPC1)
04726 Serotonergic synapse
122908564 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
122908564 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nvs04040
]
122908564 (TRPC1)
Ion channels [BR:
nvs04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122908564 (TRPC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
122908564
NCBI-ProteinID:
XP_044107469
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All DBs
Position
6:69252179..69325360
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AA seq
695 aa
AA seq
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MRSFSCWRATRSADALLVAIDSEVVGAVDILLNHRPKRSSRPTIVKLMERIQNPEYSTTM
DVAPVILAAHRNNYEILTMLLKQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYR
CLASPALIMLTEEDPILRAFELSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARN
SRELEVILNHTSSDEPLDKRGLLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQ
MSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFL
LLLNLYSLVYNEDKKNTMGPALERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQL
SFVMNSLYLATFALKVVAHNKFHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYT
TSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFTIGLTQLYDKGYTPKEQKDCVGIFCEQ
QSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLT
KLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSL
SKWICSHTSKGKVKRQNSLKEWRNLKQKRDENYQKVMCCLVHRYLTSMRQKMQSTDQATV
ENLNELRQDLSKFRNEIRDLLGFRTSKYAMFYPRN
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcttttcttgctggcgtgcgacaaggtccgcagatgcacttttggtggcaatc
gactctgaagtagtgggagctgttgatatactacttaatcatcgaccaaaacgatcatca
agaccaactatagtaaaactaatggaacgaattcagaatcctgagtattcaacaactatg
gatgttgcacctgtcattttggctgctcatcgtaacaactatgaaattcttactatgctg
ttaaaacaggatgtgtctctacccaagccccatgcagttggctgtgaatgcacgttgtgt
tctgcaaaaaacaaaaaggatagcctccgacattccaggtttcgtcttgatatatatcgc
tgtttggccagtccagctctaataatgttaacggaggaggatccaattctgagagcattt
gaacttagtgctgacttaaaagaattaagtcttgtggaggtggaattcaggaatgattat
gaggaactagcccgacaatgtaaaatgtttgctaaagatttgcttgcacaagcacggaat
tcacgagaattggaagttatcctaaaccatacatctagtgatgagcctcttgacaaacgg
ggattactagaagaaagaatgaatttaagtcgtctaaaacttgctatcaaatataaccaa
aaggagtttgtctcacagtctaactgccagcagttcctgaacactgtttggtttggacag
atgtcaggttaccgacgtaagcccacctgtaagaagataatgacagttttgacagttggc
atcttttggccagttttgtcactttgttatttgatagctcccaaatctcagttcggcaga
atcattcacactccttttatgaaatttattattcatggagcatcatatttcacgttcctg
ctgttactaaacctctactctcttgtctacaatgaggataagaaaaacacaatgggacca
gcccttgaaagaatagactatctacttatactgtggattattgggatgatttggtcagac
attaaaagactctggtatgaagggttagaagactttttggaagaatcccgtaatcaactc
agttttgtcatgaattcactttatttggcaacttttgccctcaaagtggttgctcacaac
aagtttcatgattttgctgatcggaaggattgggacgcattccatcctactctggtggca
gaagggctttttgcatttgcaaacgttctaagttatcttcgtctcttttttatgtataca
acaagctccatattgggtccattacagatttcaatgggacagatgttacaagattttgga
aaatttcttgggatgttccttcttgttttgttttctttcactattggactgacacaactg
tatgataaaggctataccccaaaagaacagaaggactgtgtaggcatcttctgtgaacag
caaagcaatgataccttccattcgttcattggcacttgctttgctttgttctggtatatt
ttctctttagcacatgtggcaatctttgtcacaagatttagttatggagaggaattgcag
tcctttgttggagcagttattgttgggacatacaatgttgtggttgtgattgtgctcacc
aagctgctggtggcaatgcttcataagagcttccagctgatagcaaatcatgaggacaaa
gaatggaagtttgctcgagcaaagttatggcttagctactttgatgacaaatgtacatta
cccccacctttcaacatcattccttcaccaaagactatttgctatatgattagtagcctc
agtaagtggatttgctctcatacatcaaaaggcaaggttaaacgtcaaaacagtttaaag
gaatggagaaatctgaaacaaaagagggatgagaactaccaaaaagtgatgtgctgcttg
gtacatcgttacctgacgtccatgaggcagaagatgcaaagtacagatcaggcaaccgtg
gaaaatctaaatgaactacgccaggatctgtcaaaattccgaaatgaaataagggattta
cttggctttcggacttctaaatatgctatgttttatccaagaaattaa
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